RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 STAG3L2P0CL84 134 aa6.5□□□□□ -1.37
HDAC6-233ENST00000489352 STAG3L3P0CL85 134 aa6.5□□□□□ -1.37
HDAC6-233ENST00000489352 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
HDAC6-233ENST00000489352 COX8CQ7Z4L0 72 aa6.5□□□□□ -1.37
HDAC6-233ENST00000489352 A0A1W2PRE2 83 aa6.49□□□□□ -1.37
HDAC6-233ENST00000489352 CXorf1O96002 111 aa6.49□□□□□ -1.37
HDAC6-233ENST00000489352 FAM229BQ4G0N7 80 aa6.49□□□□□ -1.37
HDAC6-233ENST00000489352 TCTE3Q8IZS6 198 aa6.49□□□□□ -1.37
HDAC6-233ENST00000489352 HIST1H2BAQ96A08 127 aa6.49□□□□□ -1.37
HDAC6-233ENST00000489352 FMC1Q96HJ9 113 aa6.49□□□□□ -1.37
HDAC6-233ENST00000489352 MRPL35Q9NZE8 188 aaKnown RBP6.49□□□□□ -1.37
HDAC6-233ENST00000489352 C1orf196B1AJZ1 125 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 NCR2O95944 276 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 CXCL1P09341 107 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 GIPP09681 153 aaPredicted RBP6.48□□□□□ -1.37
HDAC6-233ENST00000489352 NTF3P20783 257 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 IL15RAQ13261 267 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 TMEM241Q24JQ0 296 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 DAND5Q8N907 189 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 RAB24Q969Q5 203 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 TPPP3Q9BW30 176 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 SMIM3Q9BZL3 60 aa6.48□□□□□ -1.37
HDAC6-233ENST00000489352 NDUFA1O15239 70 aa6.47□□□□□ -1.37
HDAC6-233ENST00000489352 SPAG11AQ6PDA7 123 aa6.47□□□□□ -1.37
HDAC6-233ENST00000489352 G3V3Q6 166 aa6.46□□□□□ -1.38
HDAC6-233ENST00000489352 TLX1NBP0CAT3 122 aa6.46□□□□□ -1.38
HDAC6-233ENST00000489352 PET100P0DJ07 73 aa6.46□□□□□ -1.38
HDAC6-233ENST00000489352 UBE2G2P60604 165 aa6.46□□□□□ -1.38
HDAC6-233ENST00000489352 LBHQ53QV2 105 aaPredicted RBP6.46□□□□□ -1.38
HDAC6-233ENST00000489352 COX6B2Q6YFQ2 88 aa6.46□□□□□ -1.38
HDAC6-233ENST00000489352 C5orf38Q86SI9 138 aa6.46□□□□□ -1.38
HDAC6-233ENST00000489352 KRTAP7-1Q8IUC3 87 aa6.46□□□□□ -1.38
HDAC6-233ENST00000489352 KIR2DL4Q99706 377 aa6.46□□□□□ -1.38
HDAC6-233ENST00000489352 F8WDY8 70 aa6.45□□□□□ -1.38
HDAC6-233ENST00000489352 BCE1O60756 84 aa6.45□□□□□ -1.38
HDAC6-233ENST00000489352 LINC00242Q5T6M2 205 aa6.45□□□□□ -1.38
HDAC6-233ENST00000489352 OR10D4PQ8NGN7 298 aa6.45□□□□□ -1.38
HDAC6-233ENST00000489352 NKX6-2Q9C056 277 aaPredicted RBP6.45□□□□□ -1.38
HDAC6-233ENST00000489352 SMDT1Q9H4I9 107 aa6.45□□□□□ -1.38
HDAC6-233ENST00000489352 NDUFA12Q9UI09 145 aa6.45□□□□□ -1.38
HDAC6-233ENST00000489352 SIX6O95475 246 aa6.44□□□□□ -1.38
HDAC6-233ENST00000489352 H2BFSP57053 126 aa6.44□□□□□ -1.38
HDAC6-233ENST00000489352 IGLV8-61A0A075B6I0 122 aa6.43□□□□□ -1.38
HDAC6-233ENST00000489352 LTAP01374 205 aa6.43□□□□□ -1.38
HDAC6-233ENST00000489352 TRGC1P0CF51 173 aa6.43□□□□□ -1.38
HDAC6-233ENST00000489352 CDC42SE2Q9NRR3 84 aa6.43□□□□□ -1.38
HDAC6-233ENST00000489352 HSPB11Q9Y547 144 aa6.43□□□□□ -1.38
HDAC6-233ENST00000489352 SMLR1H3BR10 107 aa6.42□□□□□ -1.38
HDAC6-233ENST00000489352 ORAOV1Q8WV07 137 aa6.42□□□□□ -1.38
HDAC6-233ENST00000489352 ACTR3CQ9C0K3 210 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-233ENST00000489352 HMSDA8MTL9 139 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 KRTAP4-16G5E9R7 235 aaPredicted RBP6.41□□□□□ -1.38
HDAC6-233ENST00000489352 MBP02144 154 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 CFC1P0CG37 223 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 PMCHP20382 165 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 UBE2AP49459 152 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 XP32Q5T750 250 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 UNQ6190/PRO20217Q6UXQ8 127 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 PPP1R1CQ8WVI7 109 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 MRAP2Q96G30 205 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 C22orf24Q9Y442 160 aa6.41□□□□□ -1.38
HDAC6-233ENST00000489352 FXYD6-FXYD2A0A087WZ82 144 aa6.4□□□□□ -1.38
HDAC6-233ENST00000489352 TRAV13-1A0A0B4J241 112 aa6.4□□□□□ -1.38
HDAC6-233ENST00000489352 MPC2O95563 127 aa6.4□□□□□ -1.38
HDAC6-233ENST00000489352 CTRLP40313 264 aa6.4□□□□□ -1.38
HDAC6-233ENST00000489352 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
HDAC6-233ENST00000489352 STOML3Q8TAV4 291 aa6.4□□□□□ -1.38
HDAC6-233ENST00000489352 C6orf48Q9UBA6 75 aa6.4□□□□□ -1.38
HDAC6-233ENST00000489352 TNFRSF6BO95407 300 aa6.39□□□□□ -1.39
HDAC6-233ENST00000489352 AKR1C3P42330 323 aa6.39□□□□□ -1.39
HDAC6-233ENST00000489352 Q5BKY6 102 aa6.39□□□□□ -1.39
HDAC6-233ENST00000489352 C9orf129Q5T035 196 aaKnown RBP6.39□□□□□ -1.39
HDAC6-233ENST00000489352 CYTL1Q9NRR1 136 aa6.39□□□□□ -1.39
HDAC6-233ENST00000489352 FAM74A7A6NL05 159 aa6.38□□□□□ -1.39
HDAC6-233ENST00000489352 NDUFC2-KCTD14E9PQ53 114 aa6.38□□□□□ -1.39
HDAC6-233ENST00000489352 H0YIZ8 118 aa6.38□□□□□ -1.39
HDAC6-233ENST00000489352 I3L3M4 83 aa6.38□□□□□ -1.39
HDAC6-233ENST00000489352 ARPC5O15511 151 aa6.38□□□□□ -1.39
HDAC6-233ENST00000489352 C9orf62Q8N4C0 152 aa6.38□□□□□ -1.39
HDAC6-233ENST00000489352 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
HDAC6-233ENST00000489352 ZNF345Q14585 488 aa6.37□□□□□ -1.39
HDAC6-233ENST00000489352 PCOTHQ58A44 107 aa6.37□□□□□ -1.39
HDAC6-233ENST00000489352 MRPL52Q86TS9 123 aaKnown RBP6.37□□□□□ -1.39
HDAC6-233ENST00000489352 GATD1Q8NB37 220 aa6.37□□□□□ -1.39
HDAC6-233ENST00000489352 TNFSF18Q9UNG2 199 aa6.37□□□□□ -1.39
HDAC6-233ENST00000489352 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-233ENST00000489352 ATP6V0CP27449 155 aa6.36□□□□□ -1.39
HDAC6-233ENST00000489352 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
HDAC6-233ENST00000489352 C3orf22Q8N5N4 141 aa6.36□□□□□ -1.39
HDAC6-233ENST00000489352 PACRGQ96M98 296 aaPredicted RBP6.36□□□□□ -1.39
HDAC6-233ENST00000489352 LINC00846Q9NV44 126 aa6.36□□□□□ -1.39
HDAC6-233ENST00000489352 KANTRA0A1W2PQU2 76 aa6.35□□□□□ -1.39
HDAC6-233ENST00000489352 F2Z2F3 143 aa6.35□□□□□ -1.39
HDAC6-233ENST00000489352 S100A9P06702 114 aaKnown RBP6.35□□□□□ -1.39
HDAC6-233ENST00000489352 SERF2P84101 59 aa6.35□□□□□ -1.39
HDAC6-233ENST00000489352 SMAGPQ0VAQ4 97 aa6.35□□□□□ -1.39
HDAC6-233ENST00000489352 CST9LP1Q5W188 147 aa6.35□□□□□ -1.39
HDAC6-233ENST00000489352 TMUB2Q71RG4 321 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms