RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 C18orf32Q8TCD1 76 aa5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 CHCHD1Q96BP2 118 aaKnown RBP5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 PRADC1Q9BSG0 188 aa5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 TMEM191AQ9H0A3 160 aa5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 ICOSQ9Y6W8 199 aa5.56□□□□□ -1.52
TRAPPC12-221ENST00000489032 SNAI2O43623 268 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 HSBP1O75506 76 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 RAB4AP20338 218 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 PMCHP20382 165 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 CRYBA4P53673 196 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 CCL18P55774 89 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 SSTP61278 116 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 S100A12P80511 92 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 JOSD1Q15040 202 aaPredicted RBP5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 MRPL23Q16540 153 aaKnown RBP5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 ZFP2Q6ZN57 461 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 ORMDL3Q8N138 153 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 POM121L12Q8N7R1 296 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 NIT2Q9NQR4 276 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 LAMTOR2Q9Y2Q5 125 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 PYGO1Q9Y3Y4 419 aa5.55□□□□□ -1.52
TRAPPC12-221ENST00000489032 IGHV3-73A0A0B4J1V6 119 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 GATA1P15976 413 aaPredicted RBP5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 RHOHQ15669 191 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 IQCJQ1A5X6 159 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 PYY3Q5JQD4 70 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 FAM74A4Q5TZK3 123 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 RNASEKQ6P5S7 137 aaKnown RBP5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 SH2D6Q7Z4S9 175 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 NIT1Q86X76 327 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 OR10AG1Q8NH19 301 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 PRELID3AQ96N28 172 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 AP1S3Q96PC3 154 aa5.54□□□□□ -1.52
TRAPPC12-221ENST00000489032 UBR4Q5T4S7 5183 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 MUC21A0A0G2JKD1 596 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 MUC21A0A140T8X8 626 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 TRBV6-4A0A1B0GX49 114 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 NUPR1O60356 82 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 NXPH4O95158 308 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 LINC00614P0C842 121 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 CKS2P33552 79 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 FA2HQ7L5A8 372 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 AMN1Q8IY45 258 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 VSIG2Q96IQ7 327 aa5.53□□□□□ -1.52
TRAPPC12-221ENST00000489032 D6R8Y8 96 aa5.52□□□□□ -1.53
TRAPPC12-221ENST00000489032 K7EQD1 137 aa5.52□□□□□ -1.53
TRAPPC12-221ENST00000489032 ZNF56Q15929 161 aa5.52□□□□□ -1.53
TRAPPC12-221ENST00000489032 MRPL51Q4U2R6 128 aaKnown RBP5.52□□□□□ -1.53
TRAPPC12-221ENST00000489032 NEGR1Q7Z3B1 354 aa5.52□□□□□ -1.53
TRAPPC12-221ENST00000489032 SLC25A29Q8N8R3 303 aa5.52□□□□□ -1.53
TRAPPC12-221ENST00000489032 JPT2Q9H910 190 aa5.52□□□□□ -1.53
TRAPPC12-221ENST00000489032 A0A096LPF7 62 aa5.51□□□□□ -1.53
TRAPPC12-221ENST00000489032 H7C1H1 209 aa5.51□□□□□ -1.53
TRAPPC12-221ENST00000489032 PPP1R17O96001 155 aa5.51□□□□□ -1.53
TRAPPC12-221ENST00000489032 CRYGDP07320 174 aa5.51□□□□□ -1.53
TRAPPC12-221ENST00000489032 MGPP08493 103 aa5.51□□□□□ -1.53
TRAPPC12-221ENST00000489032 XGP55808 180 aa5.51□□□□□ -1.53
TRAPPC12-221ENST00000489032 C14orf178Q8N769 122 aaPredicted RBP5.51□□□□□ -1.53
TRAPPC12-221ENST00000489032 MRAP2Q96G30 205 aa5.51□□□□□ -1.53
TRAPPC12-221ENST00000489032 MAP1LC3AQ9H492 121 aa5.51□□□□□ -1.53
TRAPPC12-221ENST00000489032 VPS13DQ5THJ4 4388 aa5.51□□□□□ -1.53
TRAPPC12-221ENST00000489032 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
TRAPPC12-221ENST00000489032 TRBV10-1A0A0K0K1A3 114 aa5.5□□□□□ -1.53
TRAPPC12-221ENST00000489032 PCP4L1A6NKN8 68 aa5.5□□□□□ -1.53
TRAPPC12-221ENST00000489032 KRTDAPP60985 99 aa5.5□□□□□ -1.53
TRAPPC12-221ENST00000489032 UFSP1Q6NVU6 142 aa5.5□□□□□ -1.53
TRAPPC12-221ENST00000489032 RNF185Q96GF1 192 aa5.5□□□□□ -1.53
TRAPPC12-221ENST00000489032 DPH3P1Q9H4G8 78 aa5.5□□□□□ -1.53
TRAPPC12-221ENST00000489032 NXT2Q9NPJ8 142 aaKnown RBP5.5□□□□□ -1.53
TRAPPC12-221ENST00000489032 HSPB8Q9UJY1 196 aa5.5□□□□□ -1.53
TRAPPC12-221ENST00000489032 NACAE9PAV3 2078 aa5.5□□□□□ -1.53
TRAPPC12-221ENST00000489032 LOC100131303A0A0U1RQF7 123 aa5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 C20orf202A1L168 122 aa5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 TSTD3H0UI37 97 aa5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 LEPROTL1O95214 131 aa5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 EVI2AP22794 236 aa5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 ESRGQ1W209 222 aa5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 FAM19A2Q8N3H0 131 aa5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 ATP6V0E2Q8NHE4 81 aa5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 OPRPNQ99935 248 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 MRPS16Q9Y3D3 137 aaKnown RBP5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 LINC00588Q9Y4M8 146 aa5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
TRAPPC12-221ENST00000489032 A0A087X002 238 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 TRAV8-6A0A0B4J262 113 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 IGHV1-24A0A0C4DH33 117 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 LOC389332A0A1B0GUA5 103 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 NPYP01303 97 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 PKIAP61925 76 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 PMCHL1Q16048 86 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 LYPD5Q6UWN5 251 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 ZNRF2Q8NHG8 242 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 TMEM70Q9BUB7 260 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 MAP1LC3CQ9BXW4 147 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 KIF25-AS1Q9Y6Z4 181 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 HSPG2P98160 4391 aa5.48□□□□□ -1.53
TRAPPC12-221ENST00000489032 DMBT1Q9UGM3 2413 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC12-221ENST00000489032 IGLV2-18A0A075B6J9 118 aa5.47□□□□□ -1.53
TRAPPC12-221ENST00000489032 TRBV7-3A0A075B6L6 115 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms