RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 LINC00846Q9NV44 126 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 CALML5Q9NZT1 146 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 DNAJC15Q9Y5T4 150 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 ZFHX3Q15911 3703 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 ZMYM4Q5VZL5 1548 aa-0.94□□□□□ -2.56
CCDC93-209ENST00000488908 SIPA1L3O60292 1781 aaPredicted RBP-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 DNAH10Q8IVF4 4471 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 TRBV6-1A0A0K0K1D8 114 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 MT1EP04732 61 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 HLA-DRB4P13762 266 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 RPL7P18124 248 aaKnown RBP-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 BAGE3Q86Y29 109 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 MT1LQ93083 61 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 MAGOHBQ96A72 148 aaKnown RBP-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 GID8Q9NWU2 228 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 SCN3BQ9NY72 215 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 HLA-DRB4X5D2U9 266 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 PLXNB2O15031 1838 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 ARFGEF1Q9Y6D6 1849 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 MGAQ8IWI9 3026 aa-0.95□□□□□ -2.56
CCDC93-209ENST00000488908 KDM3BQ7LBC6 1761 aa-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 CRYBG3Q68DQ2 2970 aa-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 FAM92AA1XBS5 289 aa-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 DPM2O94777 84 aa-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 TOMM20LQ6UXN7 152 aa-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 MNS1Q8NEH6 495 aa-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 NPVFQ9HCQ7 196 aa-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 S4R3F8 94 aa-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 SLIT1O75093 1534 aa-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 COL14A1Q05707 1796 aaKnown RBP-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 IBTKQ9P2D0 1353 aaPredicted RBP-0.96□□□□□ -2.56
CCDC93-209ENST00000488908 SPTBN5Q9NRC6 3674 aaKnown RBP-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 SPAARA0A1B0GVQ0 90 aa-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 H0YJX3 145 aa-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 SYS1-DBNDD2H3BUS1 97 aa-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 BCE1O60756 84 aa-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 SMR3BP02814 79 aaPredicted RBP-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 PAEPP09466 180 aa-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 CFAP126Q5VTH2 177 aa-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 TMEM35BQ8NCS4 154 aa-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 SDF2Q99470 211 aa-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 ADGRB1O14514 1584 aa-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 KDM5CP41229 1560 aa-0.97□□□□□ -2.56
CCDC93-209ENST00000488908 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.97□□□□□ -2.57
CCDC93-209ENST00000488908 IFT172Q9UG01 1749 aa-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 EP400Q96L91 3159 aa-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 A0A087WVE0 104 aa-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 TMEM238C9JI98 176 aa-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 COX8AP10176 69 aa-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 HAMPP81172 84 aa-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 CLPSL2Q6UWE3 100 aa-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 PCBD2Q9H0N5 130 aa-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 RPRMQ9NS64 109 aa-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 OVOS2A0A0G2JMS6 1433 aa-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 SMG6Q86US8 1419 aaKnown RBP-0.98□□□□□ -2.57
CCDC93-209ENST00000488908 COL4A6Q14031 1691 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 J3KT08 172 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 E2F6O75461 281 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 IFNA17P01571 189 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 CLLU1Q5K131 121 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 PPP1R2P3Q6NXS1 205 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 KRTAP8-1Q8IUC2 63 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 OR8I2Q8N0Y5 310 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 BANF2Q9H503 90 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 NDUFA12Q9UI09 145 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 APLNQ9ULZ1 77 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 FRYLO94915 3013 aa-0.99□□□□□ -2.57
CCDC93-209ENST00000488908 ERCC6L2Q5T890 1561 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 CDC42BPGQ6DT37 1551 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 A6NIN4 97 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 E5RI56 91 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 S100A5P33763 92 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 UBE2D1P51668 147 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 RPS28P62857 69 aaKnown RBP-1□□□□□ -2.57
CCDC93-209ENST00000488908 KRTAP19-5Q3LI72 72 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 TMEM128Q5BJH2 165 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 SPANXN1Q5VSR9 72 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 LINC01545Q5VT33 79 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 TMEM244Q5VVB8 128 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 SAMD13Q5VXD3 122 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 RPL7L1Q6DKI1 246 aaKnown RBP-1□□□□□ -2.57
CCDC93-209ENST00000488908 GOLGA4Q13439 2230 aaKnown RBP-1□□□□□ -2.57
CCDC93-209ENST00000488908 WDFY4Q6ZS81 3184 aa-1□□□□□ -2.57
CCDC93-209ENST00000488908 CPSF4LA6NMK7 179 aaKnown RBP-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 I3L2K1 104 aa-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 MT-ND4LP03901 98 aa-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 UBE2D3P61077 147 aa-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 UBE2D2P62837 147 aa-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 C9orf116Q5BN46 136 aaPredicted RBP-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 PPIP5K1Q6PFW1 1433 aa-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 ADAMTS12P58397 1594 aa-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 LRRC37A3O60309 1634 aa-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 LRP6O75581 1613 aa-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 PTPN23Q9H3S7 1636 aa-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 DMDP11532 3685 aa-1.01□□□□□ -2.57
CCDC93-209ENST00000488908 DCHS1Q96JQ0 3298 aa-1.02□□□□□ -2.57
CCDC93-209ENST00000488908 CLPSL1A2RUU4 121 aa-1.02□□□□□ -2.57
CCDC93-209ENST00000488908 FGF7P21781 194 aa-1.02□□□□□ -2.57
CCDC93-209ENST00000488908 ZNF818PQ6ZRF7 136 aa-1.02□□□□□ -2.57
CCDC93-209ENST00000488908 AKAP14Q86UN6 197 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms