RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 WFDC10AQ9H1F0 79 aa13.27□□□□□ -0.29
COL16A1-215ENST00000488897 SCGB1C2P0DMR2 95 aa13.26□□□□□ -0.29
COL16A1-215ENST00000488897 KRTAP10-11P60412 298 aa13.26□□□□□ -0.29
COL16A1-215ENST00000488897 A4D1N5 150 aa13.25□□□□□ -0.29
COL16A1-215ENST00000488897 RBMY1A1P0DJD3 496 aaKnown RBP13.25□□□□□ -0.29
COL16A1-215ENST00000488897 RBMY1CP0DJD4 496 aa13.25□□□□□ -0.29
COL16A1-215ENST00000488897 RBMY1FQ15415 496 aaKnown RBP13.25□□□□□ -0.29
COL16A1-215ENST00000488897 KNCNA6PVL3 124 aa13.24□□□□□ -0.29
COL16A1-215ENST00000488897 SBSPONQ8IVN8 264 aa13.24□□□□□ -0.29
COL16A1-215ENST00000488897 MEGF8Q7Z7M0 2845 aa13.24□□□□□ -0.29
COL16A1-215ENST00000488897 A8MTW9 85 aa13.24□□□□□ -0.29
COL16A1-215ENST00000488897 A8MWV9 139 aa13.24□□□□□ -0.29
COL16A1-215ENST00000488897 PIK3CD-AS1Q5SR53 167 aa13.24□□□□□ -0.29
COL16A1-215ENST00000488897 TNFRSF18Q9Y5U5 241 aa13.24□□□□□ -0.29
COL16A1-215ENST00000488897 TRAV2A0A0B4J234 112 aa13.23□□□□□ -0.29
COL16A1-215ENST00000488897 A0A0B4J2C4 111 aa13.23□□□□□ -0.29
COL16A1-215ENST00000488897 HTN1P15515 57 aa13.23□□□□□ -0.29
COL16A1-215ENST00000488897 DEFB131AP59861 70 aa13.23□□□□□ -0.29
COL16A1-215ENST00000488897 TEN1Q86WV5 123 aa13.23□□□□□ -0.29
COL16A1-215ENST00000488897 PPDPFLQ8WWR9 84 aa13.23□□□□□ -0.29
COL16A1-215ENST00000488897 IGHV3-64A0A075B6Q5 118 aa13.23□□□□□ -0.29
COL16A1-215ENST00000488897 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.23□□□□□ -0.29
COL16A1-215ENST00000488897 M0R2P5 195 aa13.23□□□□□ -0.29
COL16A1-215ENST00000488897 IGLV1-51P01701 117 aa13.23□□□□□ -0.29
COL16A1-215ENST00000488897 MRPS36P82909 103 aaKnown RBP13.22□□□□□ -0.29
COL16A1-215ENST00000488897 MUSTN1Q8IVN3 82 aa13.22□□□□□ -0.29
COL16A1-215ENST00000488897 IGHV3-73A0A0B4J1V6 119 aa13.22□□□□□ -0.29
COL16A1-215ENST00000488897 H3BMM0 161 aa13.22□□□□□ -0.29
COL16A1-215ENST00000488897 IGHV3-33P01772 117 aa13.22□□□□□ -0.29
COL16A1-215ENST00000488897 TMEM263Q8WUH6 116 aaKnown RBP13.22□□□□□ -0.29
COL16A1-215ENST00000488897 ERG28Q9UKR5 140 aa13.22□□□□□ -0.29
COL16A1-215ENST00000488897 PTH2Q96A98 100 aa13.21□□□□□ -0.29
COL16A1-215ENST00000488897 A0A0J9YXY3 114 aa13.21□□□□□ -0.3
COL16A1-215ENST00000488897 SPXQ9BT56 116 aa13.21□□□□□ -0.3
COL16A1-215ENST00000488897 TIMM21Q9BVV7 248 aa13.21□□□□□ -0.3
COL16A1-215ENST00000488897 IGHV3-30-3P0DP02 117 aa13.2□□□□□ -0.3
COL16A1-215ENST00000488897 ZNF415Q09FC8 603 aa13.2□□□□□ -0.3
COL16A1-215ENST00000488897 C9orf66Q5T8R8 295 aa13.2□□□□□ -0.3
COL16A1-215ENST00000488897 FAM104AQ969W3 186 aa13.2□□□□□ -0.3
COL16A1-215ENST00000488897 DNAH3Q8TD57 4116 aa13.19□□□□□ -0.3
COL16A1-215ENST00000488897 SPANXA1Q9NS26 97 aa13.19□□□□□ -0.3
COL16A1-215ENST00000488897 CARD19Q96LW7 228 aa13.18□□□□□ -0.3
COL16A1-215ENST00000488897 IGHV1-58A0A0C4DH39 117 aa13.18□□□□□ -0.3
COL16A1-215ENST00000488897 EIF4EBP3O60516 100 aaPredicted RBP13.18□□□□□ -0.3
COL16A1-215ENST00000488897 CDIP1Q9H305 208 aa13.18□□□□□ -0.3
COL16A1-215ENST00000488897 RBMY1BA6NDE4 496 aaKnown RBP13.17□□□□□ -0.3
COL16A1-215ENST00000488897 RBMY1EA6NEQ0 496 aaKnown RBP13.17□□□□□ -0.3
COL16A1-215ENST00000488897 M0QXV9 152 aa13.17□□□□□ -0.3
COL16A1-215ENST00000488897 RBMY1DP0C7P1 496 aaKnown RBP13.17□□□□□ -0.3
COL16A1-215ENST00000488897 TINCRA0A1B0GVN0 87 aa13.17□□□□□ -0.3
COL16A1-215ENST00000488897 DNAJC30Q96LL9 226 aa13.16□□□□□ -0.3
COL16A1-215ENST00000488897 LINC00467Q9BRT7 94 aa13.16□□□□□ -0.3
COL16A1-215ENST00000488897 CHCHD7Q9BUK0 85 aa13.16□□□□□ -0.3
COL16A1-215ENST00000488897 CEMP1Q6PRD7 247 aaPredicted RBP13.15□□□□□ -0.3
COL16A1-215ENST00000488897 UBE2D4Q9Y2X8 147 aa13.15□□□□□ -0.3
COL16A1-215ENST00000488897 SLC25A20O43772 301 aa13.14□□□□□ -0.31
COL16A1-215ENST00000488897 Q6ZSN1 163 aa13.14□□□□□ -0.31
COL16A1-215ENST00000488897 LINC01587Q99440 93 aa13.14□□□□□ -0.31
COL16A1-215ENST00000488897 TRAV8-3A0A0A6YYJ7 113 aa13.14□□□□□ -0.31
COL16A1-215ENST00000488897 A0A1B0GV72 72 aa13.14□□□□□ -0.31
COL16A1-215ENST00000488897 H7C2G1 150 aa13.14□□□□□ -0.31
COL16A1-215ENST00000488897 CIDEAO60543 219 aa13.14□□□□□ -0.31
COL16A1-215ENST00000488897 Q1RN00 199 aa13.14□□□□□ -0.31
COL16A1-215ENST00000488897 ANKRD29Q8N6D5 301 aa13.14□□□□□ -0.31
COL16A1-215ENST00000488897 LITAFQ99732 161 aa13.14□□□□□ -0.31
COL16A1-215ENST00000488897 PRM2P04554 102 aa13.13□□□□□ -0.31
COL16A1-215ENST00000488897 VSIG2Q96IQ7 327 aa13.13□□□□□ -0.31
COL16A1-215ENST00000488897 SPANXDQ9BXN6 97 aa13.13□□□□□ -0.31
COL16A1-215ENST00000488897 SPANXCQ9NY87 97 aa13.13□□□□□ -0.31
COL16A1-215ENST00000488897 NDUFA12Q9UI09 145 aa13.13□□□□□ -0.31
COL16A1-215ENST00000488897 IGHV3-53P01767 116 aa13.13□□□□□ -0.31
COL16A1-215ENST00000488897 ODF3L2Q3SX64 289 aa13.13□□□□□ -0.31
COL16A1-215ENST00000488897 MAP6D1Q9H9H5 199 aa13.13□□□□□ -0.31
COL16A1-215ENST00000488897 C9JAW5 83 aa13.12□□□□□ -0.31
COL16A1-215ENST00000488897 ATXN8Q156A1 80 aa13.12□□□□□ -0.31
COL16A1-215ENST00000488897 RNASE13Q5GAN3 156 aaKnown RBP13.12□□□□□ -0.31
COL16A1-215ENST00000488897 NACAE9PAV3 2078 aa13.12□□□□□ -0.31
COL16A1-215ENST00000488897 TRBV30A0A0K0K1B3 111 aa13.12□□□□□ -0.31
COL16A1-215ENST00000488897 PRSS2P07478 247 aa13.12□□□□□ -0.31
COL16A1-215ENST00000488897 BEAN1Q3B7T3 259 aa13.12□□□□□ -0.31
COL16A1-215ENST00000488897 C11orf72Q8NBR9 251 aa13.12□□□□□ -0.31
COL16A1-215ENST00000488897 Q9UF83 564 aa13.12□□□□□ -0.31
COL16A1-215ENST00000488897 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.11□□□□□ -0.31
COL16A1-215ENST00000488897 IGKV2-29A2NJV5 120 aaPredicted RBP13.11□□□□□ -0.31
COL16A1-215ENST00000488897 TMEM262E9PQX1 116 aa13.11□□□□□ -0.31
COL16A1-215ENST00000488897 INSP01308 110 aa13.11□□□□□ -0.31
COL16A1-215ENST00000488897 SPINK8P0C7L1 97 aa13.1□□□□□ -0.31
COL16A1-215ENST00000488897 RS1O15537 224 aa13.1□□□□□ -0.31
COL16A1-215ENST00000488897 Q6ZUT4 128 aa13.1□□□□□ -0.31
COL16A1-215ENST00000488897 GEMIN7Q9H840 131 aaKnown RBP13.1□□□□□ -0.31
COL16A1-215ENST00000488897 PRKDCP78527 4128 aaKnown RBP13.09□□□□□ -0.31
COL16A1-215ENST00000488897 MIAQ16674 131 aa13.09□□□□□ -0.31
COL16A1-215ENST00000488897 C19orf73Q9NVV2 129 aa13.09□□□□□ -0.31
COL16A1-215ENST00000488897 COL7A1Q02388 2944 aa13.09□□□□□ -0.31
COL16A1-215ENST00000488897 ADAMTSL4-AS1Q5T5F5 129 aa13.09□□□□□ -0.31
COL16A1-215ENST00000488897 RNF183Q96D59 192 aa13.09□□□□□ -0.31
COL16A1-215ENST00000488897 LINC01620Q4KN68 170 aa13.08□□□□□ -0.32
COL16A1-215ENST00000488897 ZFAND6Q6FIF0 208 aa13.08□□□□□ -0.32
COL16A1-215ENST00000488897 TIRAPP58753 221 aa13.08□□□□□ -0.32
COL16A1-215ENST00000488897 LINC01600Q96MT4 127 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms