RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 Q6ZUT4 128 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 FRZBQ92765 325 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 BORCS7Q96B45 105 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 ANAPC16Q96DE5 110 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 LINC00526Q96FQ7 95 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 SMIM2Q9BVW6 85 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 UBE2D4Q9Y2X8 147 aa4.22□□□□□ -1.73
PTPRD-212ENST00000488774 FLG2Q5D862 2391 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-212ENST00000488774 FAT3Q8TDW7 4589 aa4.21□□□□□ -1.73
PTPRD-212ENST00000488774 PPP1R2P9O14990 202 aa4.21□□□□□ -1.74
PTPRD-212ENST00000488774 SMR3BP02814 79 aaPredicted RBP4.21□□□□□ -1.74
PTPRD-212ENST00000488774 FOXI1Q12951 378 aa4.21□□□□□ -1.74
PTPRD-212ENST00000488774 SMIM15Q7Z3B0 74 aa4.21□□□□□ -1.74
PTPRD-212ENST00000488774 ATP5L2Q7Z4Y8 100 aa4.21□□□□□ -1.74
PTPRD-212ENST00000488774 URB1-AS1Q96HZ7 61 aa4.21□□□□□ -1.74
PTPRD-212ENST00000488774 PRELID3AQ96N28 172 aa4.21□□□□□ -1.74
PTPRD-212ENST00000488774 CDC42SE2Q9NRR3 84 aa4.21□□□□□ -1.74
PTPRD-212ENST00000488774 IGLV5-52A0A0A0MRZ9 124 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 LINC00959A0A1B0GUT2 108 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 GAGE12HA6NDE8 117 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 VCYO14598 125 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 EIF4EBP3O60516 100 aaPredicted RBP4.2□□□□□ -1.74
PTPRD-212ENST00000488774 CDK2AP2O75956 126 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 GCSHP23434 173 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 RPL32P62910 135 aaKnown RBP4.2□□□□□ -1.74
PTPRD-212ENST00000488774 ELOBQ15370 118 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 MIAQ16674 131 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 TMEM97Q5BJF2 176 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 RNASEKQ6P5S7 137 aaKnown RBP4.2□□□□□ -1.74
PTPRD-212ENST00000488774 KCNIP4Q6PIL6 250 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 Q6ZSA8 131 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 LINC00173Q6ZV60 143 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 MRPL52Q86TS9 123 aaKnown RBP4.2□□□□□ -1.74
PTPRD-212ENST00000488774 C1orf43Q9BWL3 253 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 RPS10P5Q9NQ39 176 aa4.2□□□□□ -1.74
PTPRD-212ENST00000488774 A0A1B0GW15 77 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 PRSS47A8MTI9 375 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 UBE2L6O14933 153 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 APOC3P02656 99 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 IFI27P40305 119 aaPredicted RBP4.19□□□□□ -1.74
PTPRD-212ENST00000488774 KRTAP10-4P60372 401 aaPredicted RBP4.19□□□□□ -1.74
PTPRD-212ENST00000488774 COX6A2Q02221 97 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 Q0VG73 95 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 HIGD2BQ4VC39 106 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 CBLN2Q8IUK8 224 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 ORMDL3Q8N138 153 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 CHCHD10Q8WYQ3 142 aaPredicted RBP4.19□□□□□ -1.74
PTPRD-212ENST00000488774 BTF3L4Q96K17 158 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 C20orf78Q9BR46 151 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 TM2D2Q9BX73 214 aa4.19□□□□□ -1.74
PTPRD-212ENST00000488774 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.19□□□□□ -1.74
PTPRD-212ENST00000488774 A0A096LNJ9 63 aa4.18□□□□□ -1.74
PTPRD-212ENST00000488774 CCL25O15444 150 aa4.18□□□□□ -1.74
PTPRD-212ENST00000488774 CRPP02741 224 aa4.18□□□□□ -1.74
PTPRD-212ENST00000488774 CHTF8P0CG12 524 aa4.18□□□□□ -1.74
PTPRD-212ENST00000488774 XCL1P47992 114 aa4.18□□□□□ -1.74
PTPRD-212ENST00000488774 XP32Q5T750 250 aa4.18□□□□□ -1.74
PTPRD-212ENST00000488774 ZNF664Q8N3J9 261 aa4.18□□□□□ -1.74
PTPRD-212ENST00000488774 OR5A1Q8NGJ0 315 aa4.18□□□□□ -1.74
PTPRD-212ENST00000488774 ALKBH7Q9BT30 221 aaPredicted RBP4.18□□□□□ -1.74
PTPRD-212ENST00000488774 CTDSP1Q9GZU7 261 aa4.18□□□□□ -1.74
PTPRD-212ENST00000488774 IGLV4-3A0A075B6K6 122 aa4.17□□□□□ -1.74
PTPRD-212ENST00000488774 H7C423 109 aa4.17□□□□□ -1.74
PTPRD-212ENST00000488774 PHOX2AO14813 284 aa4.17□□□□□ -1.74
PTPRD-212ENST00000488774 SCO1O75880 301 aa4.17□□□□□ -1.74
PTPRD-212ENST00000488774 FCER1GP30273 86 aa4.17□□□□□ -1.74
PTPRD-212ENST00000488774 RHEBQ15382 184 aa4.17□□□□□ -1.74
PTPRD-212ENST00000488774 AMMECR1LQ6DCA0 310 aa4.17□□□□□ -1.74
PTPRD-212ENST00000488774 CDPF1Q6NVV7 123 aa4.17□□□□□ -1.74
PTPRD-212ENST00000488774 Q8N8P6 123 aa4.17□□□□□ -1.74
PTPRD-212ENST00000488774 MRPL18Q9H0U6 180 aaKnown RBP4.17□□□□□ -1.74
PTPRD-212ENST00000488774 TRAV13-1A0A0B4J241 112 aa4.16□□□□□ -1.74
PTPRD-212ENST00000488774 IGIPA6NJ69 53 aa4.16□□□□□ -1.74
PTPRD-212ENST00000488774 FAM229AH3BQW9 127 aa4.16□□□□□ -1.74
PTPRD-212ENST00000488774 PPBPP02775 128 aa4.16□□□□□ -1.74
PTPRD-212ENST00000488774 SDIM1Q6ZPB5 146 aa4.16□□□□□ -1.74
PTPRD-212ENST00000488774 SCXQ7RTU7 201 aa4.16□□□□□ -1.74
PTPRD-212ENST00000488774 C5orf38Q86SI9 138 aa4.16□□□□□ -1.74
PTPRD-212ENST00000488774 Q8N1X5 172 aa4.16□□□□□ -1.74
PTPRD-212ENST00000488774 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.16□□□□□ -1.74
PTPRD-212ENST00000488774 GNB1LQ9BYB4 327 aa4.16□□□□□ -1.74
PTPRD-212ENST00000488774 TNXBP22105 4242 aa4.16□□□□□ -1.74
PTPRD-212ENST00000488774 HERC1Q15751 4861 aa4.15□□□□□ -1.74
PTPRD-212ENST00000488774 TRAV8-4A0A0B4J246 113 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 hDV102S1A0JD36 115 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 LINC01546A6NGU7 62 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 S100A8P05109 93 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 ZNF25P17030 456 aaPredicted RBP4.15□□□□□ -1.75
PTPRD-212ENST00000488774 HNRNPA3P51991 378 aaKnown RBP4.15□□□□□ -1.75
PTPRD-212ENST00000488774 LINC00310P59036 64 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 PKIAP61925 76 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 PMCHL1Q16048 86 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 C9orf163Q8N9P6 203 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 PRSS3P2Q8NHM4 247 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 CIRBP-AS1Q8TBR5 109 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 RMI2Q96E14 147 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 KIR2DL4Q99706 377 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 TIMM21Q9BVV7 248 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 MAP1LC3AQ9H492 121 aa4.15□□□□□ -1.75
PTPRD-212ENST00000488774 CSDC2Q9Y534 153 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms