RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 SMIM2Q9BVW6 85 aa8.51□□□□□ -1.05
PHF1-210ENST00000488767 HERC2O95714 4834 aa8.5□□□□□ -1.05
PHF1-210ENST00000488767 USP17L23D6RBM5 183 aa8.5□□□□□ -1.05
PHF1-210ENST00000488767 COX19Q49B96 90 aa8.5□□□□□ -1.05
PHF1-210ENST00000488767 CLRN3Q8NCR9 226 aa8.5□□□□□ -1.05
PHF1-210ENST00000488767 MAP1LC3AQ9H492 121 aa8.5□□□□□ -1.05
PHF1-210ENST00000488767 LRP1BQ9NZR2 4599 aa8.49□□□□□ -1.05
PHF1-210ENST00000488767 NPYP01303 97 aa8.49□□□□□ -1.05
PHF1-210ENST00000488767 CFAP161Q6P656 301 aa8.49□□□□□ -1.05
PHF1-210ENST00000488767 SVBPQ8N300 66 aa8.49□□□□□ -1.05
PHF1-210ENST00000488767 CSDC2Q9Y534 153 aaKnown RBP8.49□□□□□ -1.05
PHF1-210ENST00000488767 DNAH5Q8TE73 4624 aa8.48□□□□□ -1.05
PHF1-210ENST00000488767 SS18Q15532 418 aa8.48□□□□□ -1.05
PHF1-210ENST00000488767 ZNF664Q8N3J9 261 aa8.48□□□□□ -1.05
PHF1-210ENST00000488767 RPS10P5Q9NQ39 176 aa8.48□□□□□ -1.05
PHF1-210ENST00000488767 RYR1P21817 5038 aa8.47□□□□□ -1.05
PHF1-210ENST00000488767 GAGE12HA6NDE8 117 aa8.47□□□□□ -1.05
PHF1-210ENST00000488767 SNAPINO95295 136 aa8.47□□□□□ -1.05
PHF1-210ENST00000488767 KRTAP10-1P60331 282 aa8.47□□□□□ -1.05
PHF1-210ENST00000488767 CHCHD10Q8WYQ3 142 aaPredicted RBP8.47□□□□□ -1.05
PHF1-210ENST00000488767 CDC42SE2Q9NRR3 84 aa8.47□□□□□ -1.05
PHF1-210ENST00000488767 AP5S1Q9NUS5 200 aa8.47□□□□□ -1.05
PHF1-210ENST00000488767 hDV102S1A0JD36 115 aa8.46□□□□□ -1.06
PHF1-210ENST00000488767 K7EMI3 77 aa8.46□□□□□ -1.06
PHF1-210ENST00000488767 APOC3P02656 99 aa8.46□□□□□ -1.06
PHF1-210ENST00000488767 TIMM21Q9BVV7 248 aa8.46□□□□□ -1.06
PHF1-210ENST00000488767 GNB1LQ9BYB4 327 aa8.46□□□□□ -1.06
PHF1-210ENST00000488767 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.45□□□□□ -1.06
PHF1-210ENST00000488767 LOC389332A0A1B0GUA5 103 aa8.45□□□□□ -1.06
PHF1-210ENST00000488767 CCL25O15444 150 aa8.45□□□□□ -1.06
PHF1-210ENST00000488767 MT-ND6P03923 174 aa8.45□□□□□ -1.06
PHF1-210ENST00000488767 XCL1P47992 114 aa8.45□□□□□ -1.06
PHF1-210ENST00000488767 KRTAP26-1Q6PEX3 210 aa8.45□□□□□ -1.06
PHF1-210ENST00000488767 SPANXA1Q9NS26 97 aa8.45□□□□□ -1.06
PHF1-210ENST00000488767 UBE2D4Q9Y2X8 147 aa8.45□□□□□ -1.06
PHF1-210ENST00000488767 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
PHF1-210ENST00000488767 C1orf196B1AJZ1 125 aa8.44□□□□□ -1.06
PHF1-210ENST00000488767 IFI27P40305 119 aaPredicted RBP8.44□□□□□ -1.06
PHF1-210ENST00000488767 NXT2Q9NPJ8 142 aaKnown RBP8.44□□□□□ -1.06
PHF1-210ENST00000488767 PRSS1P07477 247 aa8.43□□□□□ -1.06
PHF1-210ENST00000488767 G0S2P27469 103 aa8.43□□□□□ -1.06
PHF1-210ENST00000488767 ORMDL2Q53FV1 153 aa8.43□□□□□ -1.06
PHF1-210ENST00000488767 Q8N8P6 123 aa8.43□□□□□ -1.06
PHF1-210ENST00000488767 RPL39P62891 51 aaKnown RBP8.42□□□□□ -1.06
PHF1-210ENST00000488767 APOBP04114 4563 aaKnown RBP8.41□□□□□ -1.06
PHF1-210ENST00000488767 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
PHF1-210ENST00000488767 MALP21145 153 aa8.41□□□□□ -1.06
PHF1-210ENST00000488767 CD164L2Q6UWJ8 174 aa8.41□□□□□ -1.06
PHF1-210ENST00000488767 Q6ZUT4 128 aa8.41□□□□□ -1.06
PHF1-210ENST00000488767 Q8N1X5 172 aa8.41□□□□□ -1.06
PHF1-210ENST00000488767 CYSLTR1Q9Y271 337 aa8.41□□□□□ -1.06
PHF1-210ENST00000488767 IGHV1-58A0A0C4DH39 117 aa8.4□□□□□ -1.06
PHF1-210ENST00000488767 CNBPP62633 177 aaKnown RBP8.4□□□□□ -1.06
PHF1-210ENST00000488767 MRPS36P82909 103 aaKnown RBP8.4□□□□□ -1.06
PHF1-210ENST00000488767 FABP9Q0Z7S8 132 aa8.4□□□□□ -1.06
PHF1-210ENST00000488767 FOXI1Q12951 378 aa8.4□□□□□ -1.06
PHF1-210ENST00000488767 KIAA1644Q3SXP7 199 aa8.4□□□□□ -1.06
PHF1-210ENST00000488767 RNASE13Q5GAN3 156 aaKnown RBP8.4□□□□□ -1.06
PHF1-210ENST00000488767 Q6ZN92 141 aa8.4□□□□□ -1.06
PHF1-210ENST00000488767 PRSS3P2Q8NHM4 247 aa8.4□□□□□ -1.06
PHF1-210ENST00000488767 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
PHF1-210ENST00000488767 IFITM10A6NMD0 228 aa8.39□□□□□ -1.07
PHF1-210ENST00000488767 COX7A2LO14548 114 aa8.39□□□□□ -1.07
PHF1-210ENST00000488767 NPSP0C0P6 89 aa8.39□□□□□ -1.07
PHF1-210ENST00000488767 XGP55808 180 aa8.39□□□□□ -1.07
PHF1-210ENST00000488767 LINC01620Q4KN68 170 aa8.39□□□□□ -1.07
PHF1-210ENST00000488767 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
PHF1-210ENST00000488767 HSPG2P98160 4391 aa8.38□□□□□ -1.07
PHF1-210ENST00000488767 IGHV3-64A0A075B6Q5 118 aa8.38□□□□□ -1.07
PHF1-210ENST00000488767 GVQW2A0A096LPI5 108 aaPredicted RBP8.38□□□□□ -1.07
PHF1-210ENST00000488767 ZNF561-AS1K7EIQ3 104 aa8.38□□□□□ -1.07
PHF1-210ENST00000488767 APOMO95445 188 aa8.38□□□□□ -1.07
PHF1-210ENST00000488767 HIGD2BQ4VC39 106 aa8.38□□□□□ -1.07
PHF1-210ENST00000488767 PAPPA-AS1Q5QFB9 102 aa8.38□□□□□ -1.07
PHF1-210ENST00000488767 C2orf66Q6UXQ4 117 aa8.38□□□□□ -1.07
PHF1-210ENST00000488767 C9orf163Q8N9P6 203 aa8.38□□□□□ -1.07
PHF1-210ENST00000488767 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
PHF1-210ENST00000488767 PKIGQ9Y2B9 76 aa8.38□□□□□ -1.07
PHF1-210ENST00000488767 LINC01546A6NGU7 62 aa8.37□□□□□ -1.07
PHF1-210ENST00000488767 LINC01549A6NIU2 74 aa8.37□□□□□ -1.07
PHF1-210ENST00000488767 EPM2AB3EWF7 344 aa8.37□□□□□ -1.07
PHF1-210ENST00000488767 FAM229AH3BQW9 127 aa8.37□□□□□ -1.07
PHF1-210ENST00000488767 TEX43Q6ZNM6 134 aa8.37□□□□□ -1.07
PHF1-210ENST00000488767 Q6ZSA8 131 aa8.37□□□□□ -1.07
PHF1-210ENST00000488767 C15orf56Q8N910 161 aa8.37□□□□□ -1.07
PHF1-210ENST00000488767 TMEM141Q96I45 108 aa8.37□□□□□ -1.07
PHF1-210ENST00000488767 ALKBH7Q9BT30 221 aaPredicted RBP8.37□□□□□ -1.07
PHF1-210ENST00000488767 TGIF2-C20orf24A0A0A6YYL0 155 aa8.36□□□□□ -1.07
PHF1-210ENST00000488767 FA2HQ7L5A8 372 aa8.36□□□□□ -1.07
PHF1-210ENST00000488767 YPEL4Q96NS1 127 aa8.36□□□□□ -1.07
PHF1-210ENST00000488767 SMCO4Q9NRQ5 59 aa8.36□□□□□ -1.07
PHF1-210ENST00000488767 TRAPPC1Q9Y5R8 145 aa8.36□□□□□ -1.07
PHF1-210ENST00000488767 PCLOQ9Y6V0 5065 aa8.36□□□□□ -1.07
PHF1-210ENST00000488767 HAMPP81172 84 aa8.35□□□□□ -1.07
PHF1-210ENST00000488767 SLC7A5P1Q8MH63 180 aa8.35□□□□□ -1.07
PHF1-210ENST00000488767 CHAC1Q9BUX1 264 aa8.35□□□□□ -1.07
PHF1-210ENST00000488767 VCX2Q9H322 139 aa8.35□□□□□ -1.07
PHF1-210ENST00000488767 FAM30AQ9NZY2 134 aa8.35□□□□□ -1.07
PHF1-210ENST00000488767 IGLV4-3A0A075B6K6 122 aa8.34□□□□□ -1.07
PHF1-210ENST00000488767 FAM104AQ969W3 186 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms