RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 NMBP08949 121 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 SPAG11BQ08648 103 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 CFAP126Q5VTH2 177 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 Q5VV11 94 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 SPAG11AQ6PDA7 123 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 GTF2H5Q6ZYL4 71 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 TSLPQ969D9 159 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 MGST2Q99735 147 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 NDUFA4L2Q9NRX3 87 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 C2CD3Q4AC94 2353 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 SCN7AQ01118 1682 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 KMT2AQ03164 3969 aa0.29□□□□□ -2.36
CD46-215ENST00000488596 LRP1Q07954 4544 aaKnown RBP0.29□□□□□ -2.36
CD46-215ENST00000488596 ZFYVE16Q7Z3T8 1539 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 CELSR2Q9HCU4 2923 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 MYO7BQ6PIF6 2116 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 TRBV7-3A0A075B6L6 115 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 CTXND1A0A1B0GTU2 59 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 C20orf202A1L168 122 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 M0R135 149 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 IFITM1P13164 125 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 S100PP25815 95 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 UBE2DNLQ8IWF7 75 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 TCEAL7Q9BRU2 100 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 NPVFQ9HCQ7 196 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 DYNLRB1Q9NP97 96 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 LINC00474Q9P2X8 69 aa0.28□□□□□ -2.36
CD46-215ENST00000488596 SCAPERQ9BY12 1400 aa0.28□□□□□ -2.37
CD46-215ENST00000488596 HUWE1Q7Z6Z7 4374 aaKnown RBP0.28□□□□□ -2.37
CD46-215ENST00000488596 SHANK2Q9UPX8 1470 aa0.28□□□□□ -2.37
CD46-215ENST00000488596 DIP2CQ9Y2E4 1556 aa0.28□□□□□ -2.37
CD46-215ENST00000488596 AKAP12Q02952 1782 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 PIEZO2Q9H5I5 2752 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 PIN1P1O15428 100 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 GNG11P61952 73 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 DCDP81605 110 aaKnown RBP0.27□□□□□ -2.37
CD46-215ENST00000488596 COX6A2Q02221 97 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 COX17Q14061 63 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 SMIM4Q8WVI0 70 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 AMELXQ99217 191 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 CGREF1Q99674 301 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 DPH3P1Q9H4G8 78 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 UQCR10Q9UDW1 63 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 TNCP24821 2201 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 DOPEY2Q9Y3R5 2298 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 NCOR1O75376 2440 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 EHBP1L1Q8N3D4 1523 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 CSMD3Q7Z407 3707 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 NUP188Q5SRE5 1749 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 KMT2DO14686 5537 aa0.27□□□□□ -2.37
CD46-215ENST00000488596 PDCD11Q14690 1871 aaKnown RBP0.27□□□□□ -2.37
CD46-215ENST00000488596 SPTBN1Q01082 2364 aaKnown RBP0.26□□□□□ -2.37
CD46-215ENST00000488596 MAST4O15021 2626 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 UBR5O95071 2799 aaPredicted RBP0.26□□□□□ -2.37
CD46-215ENST00000488596 LOC285095A0A1B0GVY8 99 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 IGLC7A0M8Q6 106 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 ZNF815PA8K554 130 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 F8VRH5 84 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 CHKB-CPT1BH3BT56 60 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 HMGN4O00479 90 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 APOC3P02656 99 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 SPINK8P0C7L1 97 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 HSD52Q0P140 79 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 BAGE2Q86Y30 109 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 FAM213BQ8TBF2 198 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 C12orf57Q99622 126 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 PRKDCP78527 4128 aaKnown RBP0.26□□□□□ -2.37
CD46-215ENST00000488596 LRP6O75581 1613 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 RAPGEF6Q8TEU7 1601 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 GOLGA4Q13439 2230 aaKnown RBP0.26□□□□□ -2.37
CD46-215ENST00000488596 UNC79Q9P2D8 2635 aa0.26□□□□□ -2.37
CD46-215ENST00000488596 FAT4Q6V0I7 4981 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 GVINP1Q7Z2Y8 2422 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 AKAP6Q13023 2319 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 ANKRD26Q9UPS8 1709 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 ERCC6L2Q5T890 1561 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 CNTLNQ9NXG0 1405 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 NAP1L6A6NFF2 107 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 ATP6V1G2-DDX39BF2Z307 99 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 UQCR11O14957 56 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 SNCAP37840 140 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 HAMPP81172 84 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 Q0VG73 95 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 TMEM170BQ5T4T1 132 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 SPINK6Q6UWN8 80 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 SSBP3-AS1Q7Z2R9 100 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 C14orf144Q96I85 54 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 FAM167A-AS1Q96KT0 104 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 MANBALQ9NQG1 85 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 OTOGQ6ZRI0 2925 aa0.25□□□□□ -2.37
CD46-215ENST00000488596 BIVM-ERCC5R4GMW8 1640 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 NCOR2Q9Y618 2525 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 FYCO1Q9BQS8 1478 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 MRC2Q9UBG0 1479 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 BSNQ9UPA5 3926 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 TRAV22A0A0B4J277 110 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 TMEM218A2RU14 115 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 CRYM-AS1A6NIL9 109 aa0.24□□□□□ -2.37
CD46-215ENST00000488596 TMEM262E9PQX1 116 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms