RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 CXCL3P19876 107 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 RAB5CP51148 216 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 RPS20P60866 119 aaKnown RBP1.26□□□□□ -2.21
ITGB1-214ENST00000488427 CATR1Q13166 79 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 CENPWQ5EE01 88 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 AHSA2Q719I0 299 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 LINC00269Q8N2A0 174 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 OR51H1Q8NH63 302 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 RAB2BQ8WUD1 216 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 NIPSNAP1Q9BPW8 284 aa1.26□□□□□ -2.21
ITGB1-214ENST00000488427 GVQW2A0A096LPI5 108 aaPredicted RBP1.25□□□□□ -2.21
ITGB1-214ENST00000488427 TMEM212A6NML5 194 aa1.25□□□□□ -2.21
ITGB1-214ENST00000488427 C8orf87E5RJ46 101 aa1.25□□□□□ -2.21
ITGB1-214ENST00000488427 F8W036 122 aa1.25□□□□□ -2.21
ITGB1-214ENST00000488427 M0R2P5 195 aa1.25□□□□□ -2.21
ITGB1-214ENST00000488427 BIRC5O15392 142 aa1.25□□□□□ -2.21
ITGB1-214ENST00000488427 APOA1P02647 267 aa1.25□□□□□ -2.21
ITGB1-214ENST00000488427 SLC25A4P12235 298 aa1.25□□□□□ -2.21
ITGB1-214ENST00000488427 RNASE4P34096 147 aaKnown RBP1.25□□□□□ -2.21
ITGB1-214ENST00000488427 RPL5P46777 297 aaKnown RBP1.25□□□□□ -2.21
ITGB1-214ENST00000488427 RPL28P46779 137 aaKnown RBP1.25□□□□□ -2.21
ITGB1-214ENST00000488427 PKIAP61925 76 aa1.25□□□□□ -2.21
ITGB1-214ENST00000488427 OR5AK2Q8NH90 309 aa1.25□□□□□ -2.21
ITGB1-214ENST00000488427 TSC22D3Q99576 134 aa1.25□□□□□ -2.21
ITGB1-214ENST00000488427 A0A1B0GW15 77 aa1.24□□□□□ -2.21
ITGB1-214ENST00000488427 FXYD1O00168 92 aa1.24□□□□□ -2.21
ITGB1-214ENST00000488427 UCHL1P09936 223 aa1.24□□□□□ -2.21
ITGB1-214ENST00000488427 NFYAP23511 347 aaPredicted RBP1.24□□□□□ -2.21
ITGB1-214ENST00000488427 G6PCP35575 357 aa1.24□□□□□ -2.21
ITGB1-214ENST00000488427 SULT1A2P50226 295 aa1.24□□□□□ -2.21
ITGB1-214ENST00000488427 HSPE1P61604 102 aaKnown RBP1.24□□□□□ -2.21
ITGB1-214ENST00000488427 TMED1Q13445 227 aa1.24□□□□□ -2.21
ITGB1-214ENST00000488427 OR13C8Q8NGS7 320 aa1.24□□□□□ -2.21
ITGB1-214ENST00000488427 ACY3Q96HD9 319 aa1.24□□□□□ -2.21
ITGB1-214ENST00000488427 ZNF471Q9BX82 626 aaPredicted RBP1.24□□□□□ -2.21
ITGB1-214ENST00000488427 CKLFQ9UBR5 152 aa1.24□□□□□ -2.21
ITGB1-214ENST00000488427 DUXBA0A1W2PPF3 345 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 G3V2T6 193 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 J3QLW9 94 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 GPR31O00270 319 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 SLC17A3O00476 420 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 GNRH2O43555 120 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 NUPR1O60356 82 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 SPINK1P00995 79 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 NPPAP01160 153 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 FABP1P07148 127 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 OR4E1P0C645 316 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 UBBP0CG47 229 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 BCL2P10415 239 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 ESDP10768 282 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 S100A7P31151 101 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 PIGPP57054 158 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 TSPEAR-AS2P59090 65 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 ARPC4P59998 168 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 CFAP126Q5VTH2 177 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 HACD4Q5VWC8 232 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 FAM19A5Q7Z5A7 132 aaPredicted RBP1.23□□□□□ -2.21
ITGB1-214ENST00000488427 GID4Q8IVV7 300 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 MAFIPQ8WZ33 124 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 EIF5A2Q9GZV4 153 aaKnown RBP1.23□□□□□ -2.21
ITGB1-214ENST00000488427 CYSTM1Q9H1C7 97 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 ENY2Q9NPA8 101 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 PRO2289Q9P1D8 64 aa1.23□□□□□ -2.21
ITGB1-214ENST00000488427 FAM236DA0A1B0GTK5 79 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 PNMA8CA0A1B0GUJ8 204 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 RBAKDNA6NC62 111 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 SNRPGP15A8MWD9 76 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 MRASO14807 208 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 SHBGP04278 402 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 FAM236CP0DP71 79 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 RPL7P18124 248 aaKnown RBP1.22□□□□□ -2.21
ITGB1-214ENST00000488427 TAS2R45P59539 299 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 RPL37P61927 97 aaKnown RBP1.22□□□□□ -2.21
ITGB1-214ENST00000488427 LINC00526Q96FQ7 95 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 MIEN1Q9BRT3 115 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 C11orf1Q9H5F2 150 aa1.22□□□□□ -2.21
ITGB1-214ENST00000488427 TRBV20-1A0A075B6N2 111 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 FXYD6-FXYD2A0A087WZ82 144 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 TRBV6-8A0A0A6YYG3 113 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 A0A0A6YYH2 397 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 DAPL1A0PJW8 107 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 A6NJ64 397 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 M0R129 80 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 APOMO95445 188 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 CTXN2P0C2S0 81 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 CXCL2P19875 107 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 MSMO1Q15800 293 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 HSD17B12Q53GQ0 312 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 LCN15Q6UWW0 184 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 ARPINQ7Z6K5 226 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 COA5Q86WW8 74 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 OR2T35Q8NGX2 323 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 RNASEH2CQ8TDP1 164 aaKnown RBP1.21□□□□□ -2.22
ITGB1-214ENST00000488427 PAIP2Q9BPZ3 127 aaKnown RBP1.21□□□□□ -2.22
ITGB1-214ENST00000488427 PDCD10Q9BUL8 212 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 TMEM147Q9BVK8 224 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 NKX6-2Q9C056 277 aaPredicted RBP1.21□□□□□ -2.22
ITGB1-214ENST00000488427 NPVFQ9HCQ7 196 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 GID8Q9NWU2 228 aa1.21□□□□□ -2.22
ITGB1-214ENST00000488427 CMTM6Q9NX76 183 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms