RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 CHCHD7Q9BUK0 85 aa8.41□□□□□ -1.06
HLA-DOB-209ENST00000488325 SPANXA1Q9NS26 97 aa8.41□□□□□ -1.06
HLA-DOB-209ENST00000488325 HSPG2P98160 4391 aa8.4□□□□□ -1.06
HLA-DOB-209ENST00000488325 TRBV25-1A0A075B6N4 114 aa8.4□□□□□ -1.06
HLA-DOB-209ENST00000488325 TRAV12-1A0A0B4J245 112 aa8.4□□□□□ -1.06
HLA-DOB-209ENST00000488325 RPL39P62891 51 aaKnown RBP8.4□□□□□ -1.06
HLA-DOB-209ENST00000488325 MRPL23Q16540 153 aaKnown RBP8.4□□□□□ -1.06
HLA-DOB-209ENST00000488325 CEMP1Q6PRD7 247 aaPredicted RBP8.4□□□□□ -1.06
HLA-DOB-209ENST00000488325 TEX43Q6ZNM6 134 aa8.4□□□□□ -1.06
HLA-DOB-209ENST00000488325 TMEM243Q9BU79 118 aa8.4□□□□□ -1.06
HLA-DOB-209ENST00000488325 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
HLA-DOB-209ENST00000488325 ICOSQ9Y6W8 199 aa8.4□□□□□ -1.06
HLA-DOB-209ENST00000488325 DNAH2Q9P225 4427 aa8.39□□□□□ -1.07
HLA-DOB-209ENST00000488325 TRAV26-1A0A087WT03 109 aa8.39□□□□□ -1.07
HLA-DOB-209ENST00000488325 A0A0J9YY99 117 aa8.39□□□□□ -1.07
HLA-DOB-209ENST00000488325 IGIPA6NJ69 53 aa8.39□□□□□ -1.07
HLA-DOB-209ENST00000488325 H7C423 109 aa8.39□□□□□ -1.07
HLA-DOB-209ENST00000488325 UBE2L6O14933 153 aa8.39□□□□□ -1.07
HLA-DOB-209ENST00000488325 VSIG2Q96IQ7 327 aa8.39□□□□□ -1.07
HLA-DOB-209ENST00000488325 TIMM21Q9BVV7 248 aa8.39□□□□□ -1.07
HLA-DOB-209ENST00000488325 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 A0A087WX48 190 aa8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 IGKV2-29A2NJV5 120 aaPredicted RBP8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 HSBP1L1C9JCN9 74 aa8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 H3BNG1 76 aa8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 LCE2BO14633 110 aa8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 PMVKQ15126 192 aa8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 Q6ZTC4 211 aa8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 LINC00336Q6ZUF6 198 aa8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 BAALCQ8WXS3 180 aa8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 VAMP8Q9BV40 100 aa8.38□□□□□ -1.07
HLA-DOB-209ENST00000488325 TRBV6-8A0A0A6YYG3 113 aa8.37□□□□□ -1.07
HLA-DOB-209ENST00000488325 TRAV10A0A0B4J240 114 aa8.37□□□□□ -1.07
HLA-DOB-209ENST00000488325 NANOS2P60321 138 aaKnown RBP8.37□□□□□ -1.07
HLA-DOB-209ENST00000488325 ODF1Q14990 250 aa8.37□□□□□ -1.07
HLA-DOB-209ENST00000488325 DGAT2L7PQ6IED9 249 aa8.37□□□□□ -1.07
HLA-DOB-209ENST00000488325 CDPF1Q6NVV7 123 aa8.37□□□□□ -1.07
HLA-DOB-209ENST00000488325 NTM-AS1Q6ZSK4 140 aa8.37□□□□□ -1.07
HLA-DOB-209ENST00000488325 UBE2D4Q9Y2X8 147 aa8.37□□□□□ -1.07
HLA-DOB-209ENST00000488325 KLK5Q9Y337 293 aaPredicted RBP8.37□□□□□ -1.07
HLA-DOB-209ENST00000488325 DNAH6Q9C0G6 4158 aa8.36□□□□□ -1.07
HLA-DOB-209ENST00000488325 TRAV9-2A0A087WT02 112 aa8.36□□□□□ -1.07
HLA-DOB-209ENST00000488325 DEFB131BA0A096LNP1 70 aa8.36□□□□□ -1.07
HLA-DOB-209ENST00000488325 F8VRH5 84 aa8.36□□□□□ -1.07
HLA-DOB-209ENST00000488325 DPM2O94777 84 aa8.36□□□□□ -1.07
HLA-DOB-209ENST00000488325 MRPS36P82909 103 aaKnown RBP8.36□□□□□ -1.07
HLA-DOB-209ENST00000488325 AMMECR1LQ6DCA0 310 aa8.36□□□□□ -1.07
HLA-DOB-209ENST00000488325 VCX2Q9H322 139 aa8.36□□□□□ -1.07
HLA-DOB-209ENST00000488325 CHTOPQ9Y3Y2 248 aaKnown RBP8.36□□□□□ -1.07
HLA-DOB-209ENST00000488325 DMBT1Q9UGM3 2413 aaPredicted RBP8.36□□□□□ -1.07
HLA-DOB-209ENST00000488325 IGLV4-3A0A075B6K6 122 aa8.35□□□□□ -1.07
HLA-DOB-209ENST00000488325 PRSS29PA6NIE9 313 aa8.35□□□□□ -1.07
HLA-DOB-209ENST00000488325 FGF6P10767 208 aa8.35□□□□□ -1.07
HLA-DOB-209ENST00000488325 ZNF25P17030 456 aaPredicted RBP8.35□□□□□ -1.07
HLA-DOB-209ENST00000488325 PLNP26678 52 aa8.35□□□□□ -1.07
HLA-DOB-209ENST00000488325 PKIAP61925 76 aa8.35□□□□□ -1.07
HLA-DOB-209ENST00000488325 MRPL52Q86TS9 123 aaKnown RBP8.35□□□□□ -1.07
HLA-DOB-209ENST00000488325 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
HLA-DOB-209ENST00000488325 PMCHL2Q9BQD1 86 aa8.35□□□□□ -1.07
HLA-DOB-209ENST00000488325 CSDC2Q9Y534 153 aaKnown RBP8.35□□□□□ -1.07
HLA-DOB-209ENST00000488325 IGKCP01834 107 aa8.34□□□□□ -1.07
HLA-DOB-209ENST00000488325 ATOH7Q8N100 152 aa8.34□□□□□ -1.07
HLA-DOB-209ENST00000488325 OR5A1Q8NGJ0 315 aa8.34□□□□□ -1.07
HLA-DOB-209ENST00000488325 C2orf88Q9BSF0 95 aa8.34□□□□□ -1.07
HLA-DOB-209ENST00000488325 CHCHD5Q9BSY4 110 aa8.34□□□□□ -1.07
HLA-DOB-209ENST00000488325 CST9LQ9H4G1 147 aa8.34□□□□□ -1.07
HLA-DOB-209ENST00000488325 DNAH17Q9UFH2 4485 aa8.34□□□□□ -1.07
HLA-DOB-209ENST00000488325 A0A096LPF7 62 aa8.33□□□□□ -1.08
HLA-DOB-209ENST00000488325 TSTD3H0UI37 97 aa8.33□□□□□ -1.08
HLA-DOB-209ENST00000488325 TIRAPP58753 221 aa8.33□□□□□ -1.08
HLA-DOB-209ENST00000488325 SPATA45Q537H7 98 aa8.33□□□□□ -1.08
HLA-DOB-209ENST00000488325 AMELXQ99217 191 aa8.33□□□□□ -1.08
HLA-DOB-209ENST00000488325 MRPL35Q9NZE8 188 aaKnown RBP8.33□□□□□ -1.08
HLA-DOB-209ENST00000488325 PAM16Q9Y3D7 125 aa8.33□□□□□ -1.08
HLA-DOB-209ENST00000488325 GAGE6Q13070 117 aa8.32□□□□□ -1.08
HLA-DOB-209ENST00000488325 LELP1Q5T871 98 aa8.32□□□□□ -1.08
HLA-DOB-209ENST00000488325 Q6ZUT4 128 aa8.32□□□□□ -1.08
HLA-DOB-209ENST00000488325 PKD1P98161 4303 aa8.32□□□□□ -1.08
HLA-DOB-209ENST00000488325 ZNF664Q8N3J9 261 aa8.31□□□□□ -1.08
HLA-DOB-209ENST00000488325 C15orf53Q8NAA6 179 aa8.31□□□□□ -1.08
HLA-DOB-209ENST00000488325 OPRPNQ99935 248 aaPredicted RBP8.31□□□□□ -1.08
HLA-DOB-209ENST00000488325 MAPKAPK5-AS1Q8N8E1 139 aa8.3□□□□□ -1.08
HLA-DOB-209ENST00000488325 TRAV8-6A0A0B4J262 113 aa8.29□□□□□ -1.08
HLA-DOB-209ENST00000488325 hDV102S1A0JD36 115 aa8.29□□□□□ -1.08
HLA-DOB-209ENST00000488325 TMEM262E9PQX1 116 aa8.29□□□□□ -1.08
HLA-DOB-209ENST00000488325 IGLC3P0DOY3 106 aa8.29□□□□□ -1.08
HLA-DOB-209ENST00000488325 HERVK_113P61574 105 aa8.29□□□□□ -1.08
HLA-DOB-209ENST00000488325 SEC11AP67812 179 aa8.29□□□□□ -1.08
HLA-DOB-209ENST00000488325 ZC2HC1BQ5TFG8 222 aa8.29□□□□□ -1.08
HLA-DOB-209ENST00000488325 NFE4Q86UQ8 179 aa8.29□□□□□ -1.08
HLA-DOB-209ENST00000488325 CDC42SE2Q9NRR3 84 aa8.29□□□□□ -1.08
HLA-DOB-209ENST00000488325 IGLV4-69A0A075B6H9 119 aa8.28□□□□□ -1.08
HLA-DOB-209ENST00000488325 A0A1B0GUV1 79 aa8.28□□□□□ -1.08
HLA-DOB-209ENST00000488325 MAJINQ3KP22 176 aa8.28□□□□□ -1.08
HLA-DOB-209ENST00000488325 LYPD5Q6UWN5 251 aa8.28□□□□□ -1.08
HLA-DOB-209ENST00000488325 FAM104AQ969W3 186 aa8.28□□□□□ -1.08
HLA-DOB-209ENST00000488325 PRO1933Q9H354 126 aa8.28□□□□□ -1.08
HLA-DOB-209ENST00000488325 C11orf86A6NJI1 115 aa8.27□□□□□ -1.09
HLA-DOB-209ENST00000488325 UBE2D1P51668 147 aa8.27□□□□□ -1.09
HLA-DOB-209ENST00000488325 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms