RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 IGLC6P0CF74 106 aa11.42□□□□□ -0.58
PKD1-220ENST00000487932 SPATA12Q7Z6I5 190 aa11.42□□□□□ -0.58
PKD1-220ENST00000487932 Q8N9L7 120 aa11.42□□□□□ -0.58
PKD1-220ENST00000487932 SMR3AQ99954 134 aa11.42□□□□□ -0.58
PKD1-220ENST00000487932 MRPL55Q7Z7F7 128 aaKnown RBP11.42□□□□□ -0.58
PKD1-220ENST00000487932 ZFHX2Q9C0A1 2572 aaPredicted RBP11.41□□□□□ -0.58
PKD1-220ENST00000487932 MUC6Q6W4X9 2439 aa11.41□□□□□ -0.58
PKD1-220ENST00000487932 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
PKD1-220ENST00000487932 A6NED7 52 aa11.41□□□□□ -0.58
PKD1-220ENST00000487932 ARHGAP21Q5T5U3 1957 aa11.41□□□□□ -0.58
PKD1-220ENST00000487932 FBXL19-AS1Q494R0 122 aa11.41□□□□□ -0.58
PKD1-220ENST00000487932 TMEM223A0PJW6 202 aa11.4□□□□□ -0.58
PKD1-220ENST00000487932 IGLV2-11P01706 119 aa11.4□□□□□ -0.58
PKD1-220ENST00000487932 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
PKD1-220ENST00000487932 POM121L12Q8N7R1 296 aa11.4□□□□□ -0.58
PKD1-220ENST00000487932 IBA57-AS1B1ANH7 110 aa11.4□□□□□ -0.58
PKD1-220ENST00000487932 LINC00308Q8TCZ7 52 aa11.4□□□□□ -0.58
PKD1-220ENST00000487932 WNK1Q9H4A3 2382 aa11.39□□□□□ -0.59
PKD1-220ENST00000487932 TMEM131Q92545 1883 aa11.39□□□□□ -0.59
PKD1-220ENST00000487932 G3V4G9 280 aa11.39□□□□□ -0.59
PKD1-220ENST00000487932 C19orf71A6NCJ1 209 aa11.39□□□□□ -0.59
PKD1-220ENST00000487932 TRBV6-5A0A0K0K1A5 114 aa11.39□□□□□ -0.59
PKD1-220ENST00000487932 RBX1P62877 108 aa11.39□□□□□ -0.59
PKD1-220ENST00000487932 ODF3Q96PU9 254 aa11.39□□□□□ -0.59
PKD1-220ENST00000487932 SERP2Q8N6R1 65 aa11.38□□□□□ -0.59
PKD1-220ENST00000487932 TANC1Q9C0D5 1861 aa11.38□□□□□ -0.59
PKD1-220ENST00000487932 IGLV5-52A0A0A0MRZ9 124 aa11.38□□□□□ -0.59
PKD1-220ENST00000487932 NLRC5Q86WI3 1866 aa11.38□□□□□ -0.59
PKD1-220ENST00000487932 PRYO14603 147 aa11.38□□□□□ -0.59
PKD1-220ENST00000487932 M0R378 163 aa11.38□□□□□ -0.59
PKD1-220ENST00000487932 COA6Q5JTJ3 125 aaKnown RBP11.38□□□□□ -0.59
PKD1-220ENST00000487932 TRBV6-4A0A1B0GX49 114 aa11.37□□□□□ -0.59
PKD1-220ENST00000487932 LINC01006Q8NI28 216 aa11.37□□□□□ -0.59
PKD1-220ENST00000487932 DHRS4-AS1Q9P1J3 65 aa11.37□□□□□ -0.59
PKD1-220ENST00000487932 NCOA6Q14686 2063 aaPredicted RBP11.37□□□□□ -0.59
PKD1-220ENST00000487932 NDUFC2-KCTD14E9PQ53 114 aa11.37□□□□□ -0.59
PKD1-220ENST00000487932 ZNF22P17026 224 aaPredicted RBP11.37□□□□□ -0.59
PKD1-220ENST00000487932 Q6ZQY7 126 aa11.37□□□□□ -0.59
PKD1-220ENST00000487932 ANAPC1Q9H1A4 1944 aa11.37□□□□□ -0.59
PKD1-220ENST00000487932 FAM240AA0A1B0GVK7 77 aa11.37□□□□□ -0.59
PKD1-220ENST00000487932 C10orf25Q5T742 122 aa11.36□□□□□ -0.59
PKD1-220ENST00000487932 ZNF702PQ9H963 129 aa11.36□□□□□ -0.59
PKD1-220ENST00000487932 ESRGQ1W209 222 aa11.35□□□□□ -0.59
PKD1-220ENST00000487932 SPINK1P00995 79 aa11.34□□□□□ -0.59
PKD1-220ENST00000487932 RNASE8Q8TDE3 154 aaKnown RBP11.34□□□□□ -0.59
PKD1-220ENST00000487932 OBSL1O75147 1896 aa11.34□□□□□ -0.59
PKD1-220ENST00000487932 LELP1Q5T871 98 aa11.34□□□□□ -0.59
PKD1-220ENST00000487932 NUP210Q8TEM1 1887 aaPredicted RBP11.34□□□□□ -0.59
PKD1-220ENST00000487932 TRIAP1O43715 76 aa11.34□□□□□ -0.59
PKD1-220ENST00000487932 CD164L2Q6UWJ8 174 aa11.34□□□□□ -0.59
PKD1-220ENST00000487932 M0QY20 66 aa11.34□□□□□ -0.59
PKD1-220ENST00000487932 FSHBP01225 129 aa11.34□□□□□ -0.59
PKD1-220ENST00000487932 LINC00474Q9P2X8 69 aa11.33□□□□□ -0.6
PKD1-220ENST00000487932 NOTCH2Q04721 2471 aa11.33□□□□□ -0.6
PKD1-220ENST00000487932 MT-ATP8P03928 68 aa11.33□□□□□ -0.6
PKD1-220ENST00000487932 M0QXV9 152 aa11.33□□□□□ -0.6
PKD1-220ENST00000487932 BRI3O95415 125 aa11.33□□□□□ -0.6
PKD1-220ENST00000487932 OTOGLQ3ZCN5 2332 aa11.33□□□□□ -0.6
PKD1-220ENST00000487932 NOTCH4Q99466 2003 aa11.33□□□□□ -0.6
PKD1-220ENST00000487932 LINC00959A0A1B0GUT2 108 aa11.32□□□□□ -0.6
PKD1-220ENST00000487932 DENND4CQ5VZ89 1909 aa11.31□□□□□ -0.6
PKD1-220ENST00000487932 PLA2G2AP14555 144 aa11.31□□□□□ -0.6
PKD1-220ENST00000487932 IGHV6-1A0A0B4J1U7 121 aa11.31□□□□□ -0.6
PKD1-220ENST00000487932 TRBV27A0A0K0K1C4 114 aa11.31□□□□□ -0.6
PKD1-220ENST00000487932 C1orf229Q6ZS94 237 aaPredicted RBP11.31□□□□□ -0.6
PKD1-220ENST00000487932 SPRY4Q9C004 299 aa11.31□□□□□ -0.6
PKD1-220ENST00000487932 Q6ZS46 218 aa11.3□□□□□ -0.6
PKD1-220ENST00000487932 TP73-AS1Q9UF72 201 aa11.3□□□□□ -0.6
PKD1-220ENST00000487932 CELA1Q9UNI1 258 aa11.3□□□□□ -0.6
PKD1-220ENST00000487932 RPL28P46779 137 aaKnown RBP11.29□□□□□ -0.6
PKD1-220ENST00000487932 LINC01556Q5JQF7 62 aa11.29□□□□□ -0.6
PKD1-220ENST00000487932 FAM19A3Q7Z5A8 133 aa11.29□□□□□ -0.6
PKD1-220ENST00000487932 MAPKAPK5-AS1Q8N8E1 139 aa11.29□□□□□ -0.6
PKD1-220ENST00000487932 TANC2Q9HCD6 1990 aa11.29□□□□□ -0.6
PKD1-220ENST00000487932 ZNF106Q9H2Y7 1883 aaKnown RBP11.28□□□□□ -0.6
PKD1-220ENST00000487932 PSMG3-AS1Q96PY0 264 aa11.28□□□□□ -0.6
PKD1-220ENST00000487932 SONP18583 2426 aaKnown RBP11.28□□□□□ -0.6
PKD1-220ENST00000487932 SMIM11BQ8TCY0 68 aa11.28□□□□□ -0.6
PKD1-220ENST00000487932 C1orf137Q5JT78 98 aa11.28□□□□□ -0.6
PKD1-220ENST00000487932 Q6ZSR3 168 aa11.27□□□□□ -0.61
PKD1-220ENST00000487932 C6orf223Q8N319 242 aa11.27□□□□□ -0.61
PKD1-220ENST00000487932 UQCRQO14949 82 aa11.27□□□□□ -0.61
PKD1-220ENST00000487932 ZNF73O43830 326 aaPredicted RBP11.26□□□□□ -0.61
PKD1-220ENST00000487932 ATP5EP2Q5VTU8 51 aa11.26□□□□□ -0.61
PKD1-220ENST00000487932 V9GYY9 64 aa11.26□□□□□ -0.61
PKD1-220ENST00000487932 SORL1Q92673 2214 aa11.26□□□□□ -0.61
PKD1-220ENST00000487932 BDP1A6H8Y1 2624 aa11.25□□□□□ -0.61
PKD1-220ENST00000487932 A0A1B0GXF2 115 aa11.25□□□□□ -0.61
PKD1-220ENST00000487932 CYSRT1A8MQ03 144 aa11.25□□□□□ -0.61
PKD1-220ENST00000487932 MED12LQ86YW9 2145 aa11.25□□□□□ -0.61
PKD1-220ENST00000487932 CRIP1P50238 77 aa11.24□□□□□ -0.61
PKD1-220ENST00000487932 MRPS12O15235 138 aaKnown RBP11.24□□□□□ -0.61
PKD1-220ENST00000487932 TSHBP01222 138 aa11.24□□□□□ -0.61
PKD1-220ENST00000487932 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
PKD1-220ENST00000487932 PTPN13Q12923 2485 aa11.24□□□□□ -0.61
PKD1-220ENST00000487932 REG3GQ6UW15 175 aa11.23□□□□□ -0.61
PKD1-220ENST00000487932 LST1O00453 97 aa11.23□□□□□ -0.61
PKD1-220ENST00000487932 MRGPRG-AS1Q2M3A8 158 aa11.22□□□□□ -0.61
PKD1-220ENST00000487932 C11orf71Q6IPW1 123 aa11.22□□□□□ -0.61
PKD1-220ENST00000487932 MBD6Q96DN6 1003 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms