RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 OTORQ9NRC9 128 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 CELA1Q9UNI1 258 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 IGLV4-69A0A075B6H9 119 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 DEFB131BA0A096LNP1 70 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 TRAV10A0A0B4J240 114 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 LOC389332A0A1B0GUA5 103 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 PGPA6NDG6 321 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 SNRPGP15A8MWD9 76 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 GGTLC3B5MD39 225 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 H3BMM0 161 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 J3QR89 54 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 M0R2N4 97 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 M0R381 172 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 PRB4P10163 310 aaPredicted RBP2.09□□□□□ -2.07
GPNMB-212ENST00000487890 BCL2P10415 239 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 HLA-DRB4P13762 266 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 MIFP14174 115 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 PSMB3P49720 205 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 MP68P56378 58 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 SUPT4H1P63272 117 aaKnown RBP2.09□□□□□ -2.07
GPNMB-212ENST00000487890 TMEM241Q24JQ0 296 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 LGALS9CQ6DKI2 356 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 LCN15Q6UWW0 184 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 TMEM14EPQ6UXP3 125 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 SLC25A29Q8N8R3 303 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 OR10D4PQ8NGN7 298 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 DCANP1Q8TF63 244 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 BRK1Q8WUW1 75 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 FRZBQ92765 325 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 CIB3Q96Q77 187 aaPredicted RBP2.09□□□□□ -2.07
GPNMB-212ENST00000487890 TRGV9Q99603 122 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 SLC25A21Q9BQT8 299 aaPredicted RBP2.09□□□□□ -2.07
GPNMB-212ENST00000487890 ZNF471Q9BX82 626 aaPredicted RBP2.09□□□□□ -2.07
GPNMB-212ENST00000487890 SND1-IT1Q9HBX3 110 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 RPRMQ9NS64 109 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 MED9Q9NWA0 146 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 ZNF706Q9Y5V0 76 aaPredicted RBP2.09□□□□□ -2.07
GPNMB-212ENST00000487890 HLA-DRB4X5D2U9 266 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 VPS13DQ5THJ4 4388 aa2.09□□□□□ -2.07
GPNMB-212ENST00000487890 DNAH10Q8IVF4 4471 aa2.09□□□□□ -2.08
GPNMB-212ENST00000487890 EPPK1P58107 5090 aaKnown RBP2.09□□□□□ -2.08
GPNMB-212ENST00000487890 IGLV2-18A0A075B6J9 118 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 IGKV1D-37A0A075B6S9 117 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 FNDC10F2Z333 226 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 SYNGR2O43760 224 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 HYPMO75409 117 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 SFT2D2O95562 160 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 IL5P05113 134 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 SPINK8P0C7L1 97 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 LINC00869P0C866 280 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF705DP0CH99 300 aaPredicted RBP2.08□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF705BP0CI00 300 aaPredicted RBP2.08□□□□□ -2.08
GPNMB-212ENST00000487890 SPART-AS1P0CW21 52 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 HTN1P15515 57 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF846Q147U1 533 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 LCE3CQ5T5A8 94 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 GDF5OSQ5U4N7 250 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 Q5W150 140 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 AMMECR1LQ6DCA0 310 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 ZFP2Q6ZN57 461 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF705AQ6ZN79 300 aaPredicted RBP2.08□□□□□ -2.08
GPNMB-212ENST00000487890 FOXI2Q6ZQN5 318 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 C3orf22Q8N5N4 141 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 RNF182Q8N6D2 247 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 SCRT1Q9BWW7 348 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 SLC35B3Q9H1N7 401 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 PSENENQ9NZ42 101 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 TP73-AS1Q9UF72 201 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 V9GYH0 126 aa2.08□□□□□ -2.08
GPNMB-212ENST00000487890 TRBV19A0A075B6N1 114 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 TRAV12-2A0A075B6T6 113 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 IGKV1OR2-108A0A075B7D4 117 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 A0A0J9YX75 114 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 NAP1L6A6NFF2 107 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 A8MUN3 132 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 C9JQL5 133 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 H3BRN7 92 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 K7EPK0 472 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 LST1O00453 97 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 COX7A2P2O60397 106 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 PITX3O75364 302 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 NDUFB6O95139 128 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 CFDP00746 253 aaPredicted RBP2.07□□□□□ -2.08
GPNMB-212ENST00000487890 APOC3P02656 99 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 SEC11BP0C7V7 166 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 P0DMU3 169 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 FAM231AP0DMU4 169 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 FAM231CP0DMU5 169 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 DEFB130BP0DP73 79 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 DEFB130AP0DP74 79 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 SLC25A6P12236 298 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 LINC00313P59037 77 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 SPINK13Q1W4C9 94 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 RRN3P1Q2M238 152 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 Q6Q795 121 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 CYP2G1PQ6ZSU1 146 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 KTN1-AS1Q86SY8 53 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 ORMDL3Q8N138 153 aa2.07□□□□□ -2.08
GPNMB-212ENST00000487890 ZNF709Q8N972 641 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms