RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.17□□□□□ -1.42
LCN2-205ENST00000487719 CCL25O15444 150 aa6.17□□□□□ -1.42
LCN2-205ENST00000487719 NPYP01303 97 aa6.17□□□□□ -1.42
LCN2-205ENST00000487719 FUSP35637 526 aaKnown RBP eCLIP6.17□□□□□ -1.42
LCN2-205ENST00000487719 WFDC2Q14508 124 aa6.17□□□□□ -1.42
LCN2-205ENST00000487719 MAPKAPK5-AS1Q8N8E1 139 aa6.17□□□□□ -1.42
LCN2-205ENST00000487719 CHCHD10Q8WYQ3 142 aaPredicted RBP6.17□□□□□ -1.42
LCN2-205ENST00000487719 RPS10P5Q9NQ39 176 aa6.17□□□□□ -1.42
LCN2-205ENST00000487719 KIAA1109Q2LD37 5005 aa6.17□□□□□ -1.42
LCN2-205ENST00000487719 hDV102S1A0JD36 115 aa6.16□□□□□ -1.42
LCN2-205ENST00000487719 SNAPINO95295 136 aa6.16□□□□□ -1.42
LCN2-205ENST00000487719 G0S2P27469 103 aa6.16□□□□□ -1.42
LCN2-205ENST00000487719 SVBPQ8N300 66 aa6.16□□□□□ -1.42
LCN2-205ENST00000487719 ZNF664Q8N3J9 261 aa6.16□□□□□ -1.42
LCN2-205ENST00000487719 TIMM21Q9BVV7 248 aa6.16□□□□□ -1.42
LCN2-205ENST00000487719 CARHSP1Q9Y2V2 147 aaKnown RBP6.16□□□□□ -1.42
LCN2-205ENST00000487719 CSDC2Q9Y534 153 aaKnown RBP6.16□□□□□ -1.42
LCN2-205ENST00000487719 DYNC1H1Q14204 4646 aaKnown RBP6.15□□□□□ -1.42
LCN2-205ENST00000487719 GAGE12HA6NDE8 117 aa6.15□□□□□ -1.42
LCN2-205ENST00000487719 C1orf196B1AJZ1 125 aa6.15□□□□□ -1.42
LCN2-205ENST00000487719 K7EMI3 77 aa6.15□□□□□ -1.42
LCN2-205ENST00000487719 APOC3P02656 99 aa6.15□□□□□ -1.42
LCN2-205ENST00000487719 MT-ND6P03923 174 aa6.15□□□□□ -1.42
LCN2-205ENST00000487719 IFI27P40305 119 aaPredicted RBP6.15□□□□□ -1.42
LCN2-205ENST00000487719 KRTAP10-1P60331 282 aa6.15□□□□□ -1.42
LCN2-205ENST00000487719 ORMDL2Q53FV1 153 aa6.15□□□□□ -1.42
LCN2-205ENST00000487719 NXT2Q9NPJ8 142 aaKnown RBP6.15□□□□□ -1.42
LCN2-205ENST00000487719 CDC42SE2Q9NRR3 84 aa6.15□□□□□ -1.42
LCN2-205ENST00000487719 SPANXA1Q9NS26 97 aa6.15□□□□□ -1.42
LCN2-205ENST00000487719 LOC389332A0A1B0GUA5 103 aa6.14□□□□□ -1.43
LCN2-205ENST00000487719 LINC00959A0A1B0GUT2 108 aa6.14□□□□□ -1.43
LCN2-205ENST00000487719 MALP21145 153 aa6.14□□□□□ -1.43
LCN2-205ENST00000487719 XCL1P47992 114 aa6.14□□□□□ -1.43
LCN2-205ENST00000487719 C10orf91Q5T1B1 145 aa6.14□□□□□ -1.43
LCN2-205ENST00000487719 GNB1LQ9BYB4 327 aa6.14□□□□□ -1.43
LCN2-205ENST00000487719 PKIGQ9Y2B9 76 aa6.14□□□□□ -1.43
LCN2-205ENST00000487719 UBE2D4Q9Y2X8 147 aa6.14□□□□□ -1.43
LCN2-205ENST00000487719 CD164L2Q6UWJ8 174 aa6.13□□□□□ -1.43
LCN2-205ENST00000487719 Q6ZN92 141 aa6.13□□□□□ -1.43
LCN2-205ENST00000487719 Q8N8P6 123 aa6.13□□□□□ -1.43
LCN2-205ENST00000487719 CYSLTR1Q9Y271 337 aa6.13□□□□□ -1.43
LCN2-205ENST00000487719 TRAV13-1A0A0B4J241 112 aa6.12□□□□□ -1.43
LCN2-205ENST00000487719 IGHV1-58A0A0C4DH39 117 aa6.12□□□□□ -1.43
LCN2-205ENST00000487719 PRSS47A8MTI9 375 aa6.12□□□□□ -1.43
LCN2-205ENST00000487719 COX7A2LO14548 114 aa6.12□□□□□ -1.43
LCN2-205ENST00000487719 APOMO95445 188 aa6.12□□□□□ -1.43
LCN2-205ENST00000487719 PRSS1P07477 247 aa6.12□□□□□ -1.43
LCN2-205ENST00000487719 RPL39P62891 51 aaKnown RBP6.12□□□□□ -1.43
LCN2-205ENST00000487719 PAPPA-AS1Q5QFB9 102 aa6.12□□□□□ -1.43
LCN2-205ENST00000487719 C2orf88Q9BSF0 95 aa6.12□□□□□ -1.43
LCN2-205ENST00000487719 DNAH5Q8TE73 4624 aa6.12□□□□□ -1.43
LCN2-205ENST00000487719 LRP1BQ9NZR2 4599 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 IGHV3-64A0A075B6Q5 118 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 LINC01549A6NIU2 74 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 IFITM10A6NMD0 228 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 EPM2AB3EWF7 344 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 FAM229AH3BQW9 127 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 ZNF561-AS1K7EIQ3 104 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 CNBPP62633 177 aaKnown RBP6.11□□□□□ -1.43
LCN2-205ENST00000487719 MRPS36P82909 103 aaKnown RBP6.11□□□□□ -1.43
LCN2-205ENST00000487719 FABP9Q0Z7S8 132 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 KRTAP26-1Q6PEX3 210 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 Q6ZUT4 128 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 Q8N1X5 172 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 PRSS3P2Q8NHM4 247 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 SMCO4Q9NRQ5 59 aa6.11□□□□□ -1.43
LCN2-205ENST00000487719 RYR1P21817 5038 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 TGIF2-C20orf24A0A0A6YYL0 155 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 FOXI1Q12951 378 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 KIAA1644Q3SXP7 199 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 HIGD2BQ4VC39 106 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 RNASE13Q5GAN3 156 aaKnown RBP6.1□□□□□ -1.43
LCN2-205ENST00000487719 C2orf66Q6UXQ4 117 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 TEX43Q6ZNM6 134 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 C9orf163Q8N9P6 203 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 TMEM141Q96I45 108 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 MRPL18Q9H0U6 180 aaKnown RBP6.1□□□□□ -1.43
LCN2-205ENST00000487719 PYGO1Q9Y3Y4 419 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 HERC2O95714 4834 aa6.1□□□□□ -1.43
LCN2-205ENST00000487719 GVQW2A0A096LPI5 108 aaPredicted RBP6.09□□□□□ -1.43
LCN2-205ENST00000487719 NPSP0C0P6 89 aa6.09□□□□□ -1.43
LCN2-205ENST00000487719 LINC01620Q4KN68 170 aa6.09□□□□□ -1.43
LCN2-205ENST00000487719 FA2HQ7L5A8 372 aa6.09□□□□□ -1.43
LCN2-205ENST00000487719 C15orf56Q8N910 161 aa6.09□□□□□ -1.43
LCN2-205ENST00000487719 DPH3Q96FX2 82 aa6.09□□□□□ -1.43
LCN2-205ENST00000487719 TRAPPC1Q9Y5R8 145 aa6.09□□□□□ -1.43
LCN2-205ENST00000487719 XGP55808 180 aa6.08□□□□□ -1.44
LCN2-205ENST00000487719 Q6ZSA8 131 aa6.08□□□□□ -1.44
LCN2-205ENST00000487719 CHAC1Q9BUX1 264 aa6.08□□□□□ -1.44
LCN2-205ENST00000487719 VCX2Q9H322 139 aa6.08□□□□□ -1.44
LCN2-205ENST00000487719 PLA2G1BP04054 148 aaKnown RBP6.07□□□□□ -1.44
LCN2-205ENST00000487719 SEC11AP67812 179 aa6.07□□□□□ -1.44
LCN2-205ENST00000487719 Q5VSD8 79 aa6.07□□□□□ -1.44
LCN2-205ENST00000487719 IGLV4-3A0A075B6K6 122 aa6.06□□□□□ -1.44
LCN2-205ENST00000487719 RAB5BP61020 215 aa6.06□□□□□ -1.44
LCN2-205ENST00000487719 HAMPP81172 84 aa6.06□□□□□ -1.44
LCN2-205ENST00000487719 C5orf38Q86SI9 138 aa6.06□□□□□ -1.44
LCN2-205ENST00000487719 OR10D4PQ8NGN7 298 aa6.06□□□□□ -1.44
LCN2-205ENST00000487719 CARD19Q96LW7 228 aa6.06□□□□□ -1.44
LCN2-205ENST00000487719 ALKBH7Q9BT30 221 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms