RNA–Protein interactions for RNA: ENST00000487699.1

SATB1-215, Transcript of SATB homeobox 1, humanhuman

TSL 4

Gene SATB1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-215ENST00000487699 C1orf43Q9BWL3 253 aa6.34□□□□□ -1.39
SATB1-215ENST00000487699 FAM30AQ9NZY2 134 aa6.34□□□□□ -1.39
SATB1-215ENST00000487699 GCSHP23434 173 aa6.33□□□□□ -1.4
SATB1-215ENST00000487699 CKS2P33552 79 aa6.33□□□□□ -1.4
SATB1-215ENST00000487699 TMEM136Q6ZRR5 245 aa6.33□□□□□ -1.4
SATB1-215ENST00000487699 MRPL52Q86TS9 123 aaKnown RBP6.33□□□□□ -1.4
SATB1-215ENST00000487699 IGLV10-54A0A075B6I4 117 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 IGLV5-52A0A0A0MRZ9 124 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 C7orf77A4D0Y5 90 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 USP17L23D6RBM5 183 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 PHOX2AO14813 284 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 PPP1R17O96001 155 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 CRPP02741 224 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 S100A8P05109 93 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 PRSS1P07477 247 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 BTF3L4Q96K17 158 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 CTDSP1Q9GZU7 261 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 CDC42SE2Q9NRR3 84 aa6.32□□□□□ -1.4
SATB1-215ENST00000487699 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.31□□□□□ -1.4
SATB1-215ENST00000487699 TRAV8-4A0A0B4J246 113 aa6.31□□□□□ -1.4
SATB1-215ENST00000487699 UBE2L6O14933 153 aa6.31□□□□□ -1.4
SATB1-215ENST00000487699 PPBPP02775 128 aa6.31□□□□□ -1.4
SATB1-215ENST00000487699 SLPIP03973 132 aa6.31□□□□□ -1.4
SATB1-215ENST00000487699 LINC01620Q4KN68 170 aa6.31□□□□□ -1.4
SATB1-215ENST00000487699 Q6ZSA8 131 aa6.31□□□□□ -1.4
SATB1-215ENST00000487699 CLRN3Q8NCR9 226 aa6.31□□□□□ -1.4
SATB1-215ENST00000487699 SMIM2Q9BVW6 85 aa6.31□□□□□ -1.4
SATB1-215ENST00000487699 UBE2D4Q9Y2X8 147 aa6.31□□□□□ -1.4
SATB1-215ENST00000487699 ZNF25P17030 456 aaPredicted RBP6.3□□□□□ -1.4
SATB1-215ENST00000487699 RNASEKQ6P5S7 137 aaKnown RBP6.3□□□□□ -1.4
SATB1-215ENST00000487699 ORMDL3Q8N138 153 aa6.3□□□□□ -1.4
SATB1-215ENST00000487699 OR5A1Q8NGJ0 315 aa6.3□□□□□ -1.4
SATB1-215ENST00000487699 PRELID3AQ96N28 172 aa6.3□□□□□ -1.4
SATB1-215ENST00000487699 CSDC2Q9Y534 153 aaKnown RBP6.3□□□□□ -1.4
SATB1-215ENST00000487699 TRAV9-1A0A075B6T8 112 aa6.29□□□□□ -1.4
SATB1-215ENST00000487699 LINC00959A0A1B0GUT2 108 aa6.29□□□□□ -1.4
SATB1-215ENST00000487699 TCAPO15273 167 aa6.29□□□□□ -1.4
SATB1-215ENST00000487699 HLA-DQA1P01909 254 aa6.29□□□□□ -1.4
SATB1-215ENST00000487699 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
SATB1-215ENST00000487699 HAMPP81172 84 aa6.29□□□□□ -1.4
SATB1-215ENST00000487699 FOXI1Q12951 378 aa6.29□□□□□ -1.4
SATB1-215ENST00000487699 AMMECR1LQ6DCA0 310 aa6.29□□□□□ -1.4
SATB1-215ENST00000487699 ZNF664Q8N3J9 261 aa6.29□□□□□ -1.4
SATB1-215ENST00000487699 C15orf56Q8N910 161 aa6.29□□□□□ -1.4
SATB1-215ENST00000487699 CHCHD10Q8WYQ3 142 aaPredicted RBP6.29□□□□□ -1.4
SATB1-215ENST00000487699 KIR2DL4Q99706 377 aa6.29□□□□□ -1.4
SATB1-215ENST00000487699 IGKV3OR2-268A0A0C4DH90 116 aa6.28□□□□□ -1.4
SATB1-215ENST00000487699 GAGE12HA6NDE8 117 aa6.28□□□□□ -1.4
SATB1-215ENST00000487699 FCER1GP30273 86 aa6.28□□□□□ -1.4
SATB1-215ENST00000487699 Q8N1X5 172 aa6.28□□□□□ -1.4
SATB1-215ENST00000487699 TIMM21Q9BVV7 248 aa6.28□□□□□ -1.4
SATB1-215ENST00000487699 RHEBQ15382 184 aa6.27□□□□□ -1.41
SATB1-215ENST00000487699 KIAA1644Q3SXP7 199 aa6.27□□□□□ -1.41
SATB1-215ENST00000487699 RNASE13Q5GAN3 156 aaKnown RBP6.27□□□□□ -1.41
SATB1-215ENST00000487699 Q6ZUT4 128 aa6.27□□□□□ -1.41
SATB1-215ENST00000487699 YPEL4Q96NS1 127 aa6.27□□□□□ -1.41
SATB1-215ENST00000487699 OPRPNQ99935 248 aaPredicted RBP6.27□□□□□ -1.41
SATB1-215ENST00000487699 LAMTOR2Q9Y2Q5 125 aa6.27□□□□□ -1.41
SATB1-215ENST00000487699 LOC389332A0A1B0GUA5 103 aa6.26□□□□□ -1.41
SATB1-215ENST00000487699 PCP4P48539 62 aa6.26□□□□□ -1.41
SATB1-215ENST00000487699 C14orf177Q52M58 125 aa6.26□□□□□ -1.41
SATB1-215ENST00000487699 DGAT2L7PQ6IED9 249 aa6.26□□□□□ -1.41
SATB1-215ENST00000487699 Q8N8P6 123 aa6.26□□□□□ -1.41
SATB1-215ENST00000487699 C9orf163Q8N9P6 203 aa6.26□□□□□ -1.41
SATB1-215ENST00000487699 TMEM101Q96IK0 257 aa6.26□□□□□ -1.41
SATB1-215ENST00000487699 GNB1LQ9BYB4 327 aa6.26□□□□□ -1.41
SATB1-215ENST00000487699 RPS10P5Q9NQ39 176 aa6.26□□□□□ -1.41
SATB1-215ENST00000487699 PANO1I0J062 215 aa6.25□□□□□ -1.41
SATB1-215ENST00000487699 CCL25O15444 150 aa6.25□□□□□ -1.41
SATB1-215ENST00000487699 APOC3P02656 99 aa6.25□□□□□ -1.41
SATB1-215ENST00000487699 CNBPP62633 177 aaKnown RBP6.25□□□□□ -1.41
SATB1-215ENST00000487699 MRPS36P82909 103 aaKnown RBP6.25□□□□□ -1.41
SATB1-215ENST00000487699 SDIM1Q6ZPB5 146 aa6.25□□□□□ -1.41
SATB1-215ENST00000487699 ALKBH7Q9BT30 221 aaPredicted RBP6.25□□□□□ -1.41
SATB1-215ENST00000487699 PKHD1L1Q86WI1 4243 aa6.24□□□□□ -1.41
SATB1-215ENST00000487699 TGIF2-C20orf24A0A0A6YYL0 155 aa6.24□□□□□ -1.41
SATB1-215ENST00000487699 LINC01546A6NGU7 62 aa6.24□□□□□ -1.41
SATB1-215ENST00000487699 HSBP1L1C9JCN9 74 aa6.24□□□□□ -1.41
SATB1-215ENST00000487699 IFI27P40305 119 aaPredicted RBP6.24□□□□□ -1.41
SATB1-215ENST00000487699 XCL1P47992 114 aa6.24□□□□□ -1.41
SATB1-215ENST00000487699 MAP1LC3AQ9H492 121 aa6.24□□□□□ -1.41
SATB1-215ENST00000487699 SPANXA1Q9NS26 97 aa6.24□□□□□ -1.41
SATB1-215ENST00000487699 PYGO1Q9Y3Y4 419 aa6.24□□□□□ -1.41
SATB1-215ENST00000487699 IGLV4-3A0A075B6K6 122 aa6.23□□□□□ -1.41
SATB1-215ENST00000487699 GVQW2A0A096LPI5 108 aaPredicted RBP6.23□□□□□ -1.41
SATB1-215ENST00000487699 SMR3BP02814 79 aaPredicted RBP6.23□□□□□ -1.41
SATB1-215ENST00000487699 S100PP25815 95 aa6.23□□□□□ -1.41
SATB1-215ENST00000487699 ODF1Q14990 250 aa6.23□□□□□ -1.41
SATB1-215ENST00000487699 CD164L2Q6UWJ8 174 aa6.23□□□□□ -1.41
SATB1-215ENST00000487699 TRAV13-1A0A0B4J241 112 aa6.22□□□□□ -1.41
SATB1-215ENST00000487699 hDV102S1A0JD36 115 aa6.22□□□□□ -1.41
SATB1-215ENST00000487699 IGIPA6NJ69 53 aa6.22□□□□□ -1.41
SATB1-215ENST00000487699 C1orf196B1AJZ1 125 aa6.22□□□□□ -1.41
SATB1-215ENST00000487699 HIGD2BQ4VC39 106 aa6.22□□□□□ -1.41
SATB1-215ENST00000487699 ZC2HC1BQ5TFG8 222 aa6.22□□□□□ -1.41
SATB1-215ENST00000487699 LINC00173Q6ZV60 143 aa6.22□□□□□ -1.41
SATB1-215ENST00000487699 SCXQ7RTU7 201 aa6.22□□□□□ -1.41
SATB1-215ENST00000487699 SVBPQ8N300 66 aa6.22□□□□□ -1.41
SATB1-215ENST00000487699 TMEM18Q96B42 140 aa6.22□□□□□ -1.41
SATB1-215ENST00000487699 URB1-AS1Q96HZ7 61 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms