RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 H7C1H1 209 aa3.12□□□□□ -1.91
R3HDM1-218ENST00000487294 H7C423 109 aa3.12□□□□□ -1.91
R3HDM1-218ENST00000487294 S100A9P06702 114 aaKnown RBP3.12□□□□□ -1.91
R3HDM1-218ENST00000487294 IFITM3Q01628 133 aa3.12□□□□□ -1.91
R3HDM1-218ENST00000487294 CLPSL2Q6UWE3 100 aa3.12□□□□□ -1.91
R3HDM1-218ENST00000487294 Q6ZRP5 223 aa3.12□□□□□ -1.91
R3HDM1-218ENST00000487294 GTSF1Q8WW33 167 aa3.12□□□□□ -1.91
R3HDM1-218ENST00000487294 PKIGQ9Y2B9 76 aa3.12□□□□□ -1.91
R3HDM1-218ENST00000487294 TMSB15BA0A087X1C1 80 aa3.11□□□□□ -1.91
R3HDM1-218ENST00000487294 A0A096LNI7 61 aa3.11□□□□□ -1.91
R3HDM1-218ENST00000487294 MUC21A0A0G2JKD1 596 aa3.11□□□□□ -1.91
R3HDM1-218ENST00000487294 SSNA1O43805 119 aa3.11□□□□□ -1.91
R3HDM1-218ENST00000487294 UBE2G1P62253 170 aa3.11□□□□□ -1.91
R3HDM1-218ENST00000487294 MAJINQ3KP22 176 aa3.11□□□□□ -1.91
R3HDM1-218ENST00000487294 SPANXN1Q5VSR9 72 aa3.11□□□□□ -1.91
R3HDM1-218ENST00000487294 AP1S3Q96PC3 154 aa3.11□□□□□ -1.91
R3HDM1-218ENST00000487294 TMEM243Q9BU79 118 aa3.11□□□□□ -1.91
R3HDM1-218ENST00000487294 FAM231BA6NCW3 169 aa3.1□□□□□ -1.91
R3HDM1-218ENST00000487294 IGLC6P0CF74 106 aa3.1□□□□□ -1.91
R3HDM1-218ENST00000487294 SMIM17P0DL12 118 aa3.1□□□□□ -1.91
R3HDM1-218ENST00000487294 UBE2G2P60604 165 aa3.1□□□□□ -1.91
R3HDM1-218ENST00000487294 RASL11AQ6T310 242 aa3.1□□□□□ -1.91
R3HDM1-218ENST00000487294 ZNF664Q8N3J9 261 aa3.1□□□□□ -1.91
R3HDM1-218ENST00000487294 INO80EQ8NBZ0 244 aaPredicted RBP3.1□□□□□ -1.91
R3HDM1-218ENST00000487294 STOML3Q8TAV4 291 aa3.1□□□□□ -1.91
R3HDM1-218ENST00000487294 PSORS1C2Q9UIG4 136 aa3.1□□□□□ -1.91
R3HDM1-218ENST00000487294 BORCS7-ASMTA0A0B4J1R7 106 aa3.09□□□□□ -1.91
R3HDM1-218ENST00000487294 IGKV2-24A0A0C4DH68 120 aa3.09□□□□□ -1.91
R3HDM1-218ENST00000487294 MAP1LC3B2A6NCE7 125 aa3.09□□□□□ -1.91
R3HDM1-218ENST00000487294 AKR1C3P42330 323 aa3.09□□□□□ -1.91
R3HDM1-218ENST00000487294 RPL7L1Q6DKI1 246 aaKnown RBP3.09□□□□□ -1.91
R3HDM1-218ENST00000487294 FAM210AQ96ND0 272 aa3.09□□□□□ -1.91
R3HDM1-218ENST00000487294 MAP1LC3BQ9GZQ8 125 aa3.09□□□□□ -1.91
R3HDM1-218ENST00000487294 NIT2Q9NQR4 276 aa3.09□□□□□ -1.91
R3HDM1-218ENST00000487294 A0A0U1RQV1 116 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 F2Z2F3 143 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 NCR2O95944 276 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 SULT1A2P50226 295 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 RAB5CP51148 216 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 NKX2-5P52952 324 aaPredicted RBP3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 CACNG7P62955 275 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 COTL1Q14019 142 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 Q5BKY6 102 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 AKR1C8PQ5T2L2 129 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 CST9LP1Q5W188 147 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 BAGE2Q86Y30 109 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 LYPD6BQ8NI32 183 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 MBD3L1Q8WWY6 194 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 CHCHD10Q8WYQ3 142 aaPredicted RBP3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 SMIM12Q96EX1 92 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 CNFNQ9BYD5 112 aa3.08□□□□□ -1.92
R3HDM1-218ENST00000487294 IGLV7-46A0A075B6I9 117 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 IGHV1-58A0A0C4DH39 117 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 MUC21A0A140T8X8 626 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 C19orf71A6NCJ1 209 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 UBE2L6O14933 153 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 GIPP09681 153 aaPredicted RBP3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 TRGC1P0CF51 173 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 VPREB1P12018 145 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 ZNF25P17030 456 aaPredicted RBP3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 NTF3P20783 257 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 DSCR10P59022 87 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 DEFA1P59665 94 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 DEFA3P59666 94 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 RPS20P60866 119 aaKnown RBP3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 HIGD2BQ4VC39 106 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 TMUB2Q71RG4 321 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 C9orf62Q8N4C0 152 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 FER1L6-AS1Q8NA97 138 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 OR5A1Q8NGJ0 315 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 C11orf52Q96A22 123 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 CYTL1Q9NRR1 136 aa3.07□□□□□ -1.92
R3HDM1-218ENST00000487294 IGLV1-50A0A075B6I6 118 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 LINC00959A0A1B0GUT2 108 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 A0A1W2PNN7 141 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 UMAD1C9J7I0 102 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 FGF6P10767 208 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 CTRLP40313 264 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 RPL35P42766 123 aaKnown RBP3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 SYCNQ0VAF6 134 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 CD164L2Q6UWJ8 174 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 DIRC1Q969H9 104 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 CARD19Q96LW7 228 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 ALG5Q9Y673 324 aa3.06□□□□□ -1.92
R3HDM1-218ENST00000487294 TRAV26-2A0A0B4J265 109 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 TRBV6-5A0A0K0K1A5 114 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 LOC107984640A0A0U1RRK4 108 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 XKRY2A2RUG3 117 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 G3V3Q6 166 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 CCL25O15444 150 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 PFDN1O60925 122 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 MGPP08493 103 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 KRTAP1-4P0C5Y4 121 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 ESDP10768 282 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 AMMECR1LQ6DCA0 310 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 TEX261Q6UWH6 196 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 MRPL52Q86TS9 123 aaKnown RBP3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 GATD1Q8NB37 220 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 NUP35Q8NFH5 326 aa3.05□□□□□ -1.92
R3HDM1-218ENST00000487294 C2orf48Q96LS8 159 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms