RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TNFRSF6BO95407 300 aa7.62□□□□□ -1.19
TRIM56-204ENST00000487252 MAP1LC3AQ9H492 121 aa7.62□□□□□ -1.19
TRIM56-204ENST00000487252 NXT2Q9NPJ8 142 aaKnown RBP7.62□□□□□ -1.19
TRIM56-204ENST00000487252 IBA57-AS1B1ANH7 110 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 NCR2O95944 276 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 HBDP02042 147 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 RNASE4P34096 147 aaKnown RBP7.61□□□□□ -1.19
TRIM56-204ENST00000487252 SSTP61278 116 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 MAJINQ3KP22 176 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 ANXA2RQ3ZCQ2 193 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 Q6ZTI0 123 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 ATOH7Q8N100 152 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 NRACQ8N912 160 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 MRAP2Q96G30 205 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 ST20Q9HBF5 79 aa7.61□□□□□ -1.19
TRIM56-204ENST00000487252 LOC389332A0A1B0GUA5 103 aa7.6□□□□□ -1.19
TRIM56-204ENST00000487252 H3BVH4 76 aa7.6□□□□□ -1.19
TRIM56-204ENST00000487252 LEPP41159 167 aa7.6□□□□□ -1.19
TRIM56-204ENST00000487252 DAZ2Q13117 558 aaKnown RBP7.6□□□□□ -1.19
TRIM56-204ENST00000487252 XP32Q5T750 250 aa7.6□□□□□ -1.19
TRIM56-204ENST00000487252 SMIM15Q7Z3B0 74 aa7.6□□□□□ -1.19
TRIM56-204ENST00000487252 Q8N8P6 123 aa7.6□□□□□ -1.19
TRIM56-204ENST00000487252 A0A1B0GV90 55 aa7.59□□□□□ -1.19
TRIM56-204ENST00000487252 PAX4O43316 350 aa7.59□□□□□ -1.19
TRIM56-204ENST00000487252 FCER1GP30273 86 aa7.59□□□□□ -1.19
TRIM56-204ENST00000487252 SPANXN1Q5VSR9 72 aa7.59□□□□□ -1.19
TRIM56-204ENST00000487252 NEGR1Q7Z3B1 354 aa7.59□□□□□ -1.19
TRIM56-204ENST00000487252 LINC01600Q96MT4 127 aa7.59□□□□□ -1.19
TRIM56-204ENST00000487252 M0R381 172 aa7.58□□□□□ -1.2
TRIM56-204ENST00000487252 RNASE3P12724 160 aaKnown RBP7.58□□□□□ -1.2
TRIM56-204ENST00000487252 GATA1P15976 413 aaPredicted RBP7.58□□□□□ -1.2
TRIM56-204ENST00000487252 MRPL23Q16540 153 aaKnown RBP7.58□□□□□ -1.2
TRIM56-204ENST00000487252 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.57□□□□□ -1.2
TRIM56-204ENST00000487252 C7orf71A4D174 169 aa7.57□□□□□ -1.2
TRIM56-204ENST00000487252 GNRH2O43555 120 aa7.57□□□□□ -1.2
TRIM56-204ENST00000487252 ZNF415Q09FC8 603 aa7.57□□□□□ -1.2
TRIM56-204ENST00000487252 Q6ZN92 141 aa7.57□□□□□ -1.2
TRIM56-204ENST00000487252 IFI27L1Q96BM0 104 aa7.57□□□□□ -1.2
TRIM56-204ENST00000487252 DPH3P1Q9H4G8 78 aa7.57□□□□□ -1.2
TRIM56-204ENST00000487252 KIF25-AS1Q9Y6Z4 181 aa7.57□□□□□ -1.2
TRIM56-204ENST00000487252 hDV102S1A0JD36 115 aa7.56□□□□□ -1.2
TRIM56-204ENST00000487252 J3KRW8 73 aa7.56□□□□□ -1.2
TRIM56-204ENST00000487252 S100A4P26447 101 aaKnown RBP7.56□□□□□ -1.2
TRIM56-204ENST00000487252 CRYBA4P53673 196 aa7.56□□□□□ -1.2
TRIM56-204ENST00000487252 RPL32P62910 135 aaKnown RBP7.56□□□□□ -1.2
TRIM56-204ENST00000487252 LINC01556Q5JQF7 62 aa7.56□□□□□ -1.2
TRIM56-204ENST00000487252 C9orf85Q96MD7 179 aa7.56□□□□□ -1.2
TRIM56-204ENST00000487252 C20orf78Q9BR46 151 aa7.56□□□□□ -1.2
TRIM56-204ENST00000487252 PRO0255Q9UI72 69 aa7.56□□□□□ -1.2
TRIM56-204ENST00000487252 TRGV2A0A075B6R0 118 aa7.55□□□□□ -1.2
TRIM56-204ENST00000487252 HSBP1L1C9JCN9 74 aa7.55□□□□□ -1.2
TRIM56-204ENST00000487252 K7EMI3 77 aa7.55□□□□□ -1.2
TRIM56-204ENST00000487252 CDKN1BP46527 198 aa7.55□□□□□ -1.2
TRIM56-204ENST00000487252 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
TRIM56-204ENST00000487252 RASL10AQ92737 203 aa7.55□□□□□ -1.2
TRIM56-204ENST00000487252 SMIM2Q9BVW6 85 aa7.55□□□□□ -1.2
TRIM56-204ENST00000487252 PHLDA3Q9Y5J5 127 aa7.55□□□□□ -1.2
TRIM56-204ENST00000487252 TRAV26-2A0A0B4J265 109 aa7.54□□□□□ -1.2
TRIM56-204ENST00000487252 IGHV3-16A0A0C4DH30 117 aa7.54□□□□□ -1.2
TRIM56-204ENST00000487252 IGHV3-38A0A0C4DH36 116 aa7.54□□□□□ -1.2
TRIM56-204ENST00000487252 PPP1R17O96001 155 aa7.54□□□□□ -1.2
TRIM56-204ENST00000487252 LAGE3Q14657 143 aa7.54□□□□□ -1.2
TRIM56-204ENST00000487252 FAM159AQ6UWV7 190 aa7.54□□□□□ -1.2
TRIM56-204ENST00000487252 AP1S3Q96PC3 154 aa7.54□□□□□ -1.2
TRIM56-204ENST00000487252 PMCHL2Q9BQD1 86 aa7.54□□□□□ -1.2
TRIM56-204ENST00000487252 Q9HAA7 133 aa7.54□□□□□ -1.2
TRIM56-204ENST00000487252 TRAV12-3A0A0B4J271 114 aa7.53□□□□□ -1.2
TRIM56-204ENST00000487252 K7EQD1 137 aa7.53□□□□□ -1.2
TRIM56-204ENST00000487252 COX8AP10176 69 aa7.53□□□□□ -1.2
TRIM56-204ENST00000487252 SLC25A34Q6PIV7 304 aa7.53□□□□□ -1.2
TRIM56-204ENST00000487252 IGHV1OR15-1A0A075B7D0 117 aa7.52□□□□□ -1.21
TRIM56-204ENST00000487252 LECT2O14960 151 aa7.52□□□□□ -1.21
TRIM56-204ENST00000487252 ATP5LO75964 103 aa7.52□□□□□ -1.21
TRIM56-204ENST00000487252 SMIM17P0DL12 118 aa7.52□□□□□ -1.21
TRIM56-204ENST00000487252 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
TRIM56-204ENST00000487252 COL5A1-AS1Q5SY13 56 aa7.52□□□□□ -1.21
TRIM56-204ENST00000487252 C14orf178Q8N769 122 aaPredicted RBP7.52□□□□□ -1.21
TRIM56-204ENST00000487252 LINC00469Q8N7U9 141 aa7.52□□□□□ -1.21
TRIM56-204ENST00000487252 C11orf72Q8NBR9 251 aa7.52□□□□□ -1.21
TRIM56-204ENST00000487252 TM2D2Q9BX73 214 aa7.52□□□□□ -1.21
TRIM56-204ENST00000487252 HHLA3Q9XRX5 114 aa7.52□□□□□ -1.21
TRIM56-204ENST00000487252 H0Y8G0 127 aa7.51□□□□□ -1.21
TRIM56-204ENST00000487252 DLEU1O43261 78 aa7.51□□□□□ -1.21
TRIM56-204ENST00000487252 FGF6P10767 208 aa7.51□□□□□ -1.21
TRIM56-204ENST00000487252 GYPEP15421 78 aa7.51□□□□□ -1.21
TRIM56-204ENST00000487252 FHL2Q14192 279 aa7.51□□□□□ -1.21
TRIM56-204ENST00000487252 ORMDL2Q53FV1 153 aa7.51□□□□□ -1.21
TRIM56-204ENST00000487252 ANKRD39Q53RE8 183 aa7.51□□□□□ -1.21
TRIM56-204ENST00000487252 STPG4Q8N801 248 aa7.51□□□□□ -1.21
TRIM56-204ENST00000487252 A0A0J9YXV3 536 aa7.5□□□□□ -1.21
TRIM56-204ENST00000487252 TRBV6-5A0A0K0K1A5 114 aa7.5□□□□□ -1.21
TRIM56-204ENST00000487252 TCAPO15273 167 aa7.5□□□□□ -1.21
TRIM56-204ENST00000487252 TIRAPP58753 221 aa7.5□□□□□ -1.21
TRIM56-204ENST00000487252 TOMM6Q96B49 74 aa7.5□□□□□ -1.21
TRIM56-204ENST00000487252 RPL39LQ96EH5 51 aaKnown RBP7.5□□□□□ -1.21
TRIM56-204ENST00000487252 TRGV11A0A075B6L2 103 aa7.49□□□□□ -1.21
TRIM56-204ENST00000487252 TRAV12-1A0A0B4J245 112 aa7.49□□□□□ -1.21
TRIM56-204ENST00000487252 MGPP08493 103 aa7.49□□□□□ -1.21
TRIM56-204ENST00000487252 POLR2KP53803 58 aaKnown RBP7.49□□□□□ -1.21
TRIM56-204ENST00000487252 C2orf91Q6ZV80 131 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms