RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 SMAGPQ0VAQ4 97 aa8.62□□□□□ -1.03
SF1-216ENST00000486867 COX19Q49B96 90 aa8.62□□□□□ -1.03
SF1-216ENST00000486867 C14orf177Q52M58 125 aa8.62□□□□□ -1.03
SF1-216ENST00000486867 RNASEKQ6P5S7 137 aaKnown RBP8.62□□□□□ -1.03
SF1-216ENST00000486867 GNB1LQ9BYB4 327 aa8.62□□□□□ -1.03
SF1-216ENST00000486867 RPS10P5Q9NQ39 176 aa8.62□□□□□ -1.03
SF1-216ENST00000486867 RYR1P21817 5038 aa8.61□□□□□ -1.03
SF1-216ENST00000486867 IGLV5-52A0A0A0MRZ9 124 aa8.61□□□□□ -1.03
SF1-216ENST00000486867 USP17L23D6RBM5 183 aa8.61□□□□□ -1.03
SF1-216ENST00000486867 GCSHP23434 173 aa8.61□□□□□ -1.03
SF1-216ENST00000486867 SVBPQ8N300 66 aa8.61□□□□□ -1.03
SF1-216ENST00000486867 TMEM101Q96IK0 257 aa8.61□□□□□ -1.03
SF1-216ENST00000486867 HSPG2P98160 4391 aa8.61□□□□□ -1.03
SF1-216ENST00000486867 IGLV10-54A0A075B6I4 117 aa8.6□□□□□ -1.03
SF1-216ENST00000486867 K7EMI3 77 aa8.6□□□□□ -1.03
SF1-216ENST00000486867 SNAPINO95295 136 aa8.6□□□□□ -1.03
SF1-216ENST00000486867 APOC3P02656 99 aa8.6□□□□□ -1.03
SF1-216ENST00000486867 NDUFA5Q16718 116 aa8.6□□□□□ -1.03
SF1-216ENST00000486867 ZNF664Q8N3J9 261 aa8.6□□□□□ -1.03
SF1-216ENST00000486867 FAM104AQ969W3 186 aa8.6□□□□□ -1.03
SF1-216ENST00000486867 TMEM18Q96B42 140 aa8.6□□□□□ -1.03
SF1-216ENST00000486867 MAP1LC3AQ9H492 121 aa8.6□□□□□ -1.03
SF1-216ENST00000486867 LINC00959A0A1B0GUT2 108 aa8.59□□□□□ -1.03
SF1-216ENST00000486867 CCL25O15444 150 aa8.59□□□□□ -1.03
SF1-216ENST00000486867 MT-ND6P03923 174 aa8.59□□□□□ -1.03
SF1-216ENST00000486867 Q8N8P6 123 aa8.59□□□□□ -1.03
SF1-216ENST00000486867 SPANXA1Q9NS26 97 aa8.59□□□□□ -1.03
SF1-216ENST00000486867 PRSS1P07477 247 aa8.58□□□□□ -1.04
SF1-216ENST00000486867 RPL39P62891 51 aaKnown RBP8.58□□□□□ -1.04
SF1-216ENST00000486867 MRPS36P82909 103 aaKnown RBP8.58□□□□□ -1.04
SF1-216ENST00000486867 Q6ZSA8 131 aa8.58□□□□□ -1.04
SF1-216ENST00000486867 CHCHD10Q8WYQ3 142 aaPredicted RBP8.58□□□□□ -1.04
SF1-216ENST00000486867 PYGO1Q9Y3Y4 419 aa8.58□□□□□ -1.04
SF1-216ENST00000486867 XGP55808 180 aa8.57□□□□□ -1.04
SF1-216ENST00000486867 FOXI1Q12951 378 aa8.57□□□□□ -1.04
SF1-216ENST00000486867 DGAT2L7PQ6IED9 249 aa8.57□□□□□ -1.04
SF1-216ENST00000486867 YPEL4Q96NS1 127 aa8.57□□□□□ -1.04
SF1-216ENST00000486867 NXT2Q9NPJ8 142 aaKnown RBP8.57□□□□□ -1.04
SF1-216ENST00000486867 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.56□□□□□ -1.04
SF1-216ENST00000486867 GAGE12HA6NDE8 117 aa8.56□□□□□ -1.04
SF1-216ENST00000486867 LINC01546A6NGU7 62 aa8.56□□□□□ -1.04
SF1-216ENST00000486867 RAB5AP20339 215 aa8.56□□□□□ -1.04
SF1-216ENST00000486867 Q6ZUT4 128 aa8.56□□□□□ -1.04
SF1-216ENST00000486867 C15orf56Q8N910 161 aa8.56□□□□□ -1.04
SF1-216ENST00000486867 ALKBH7Q9BT30 221 aaPredicted RBP8.56□□□□□ -1.04
SF1-216ENST00000486867 DNAH8Q96JB1 4490 aa8.56□□□□□ -1.04
SF1-216ENST00000486867 CNBPP62633 177 aaKnown RBP8.55□□□□□ -1.04
SF1-216ENST00000486867 KIAA1644Q3SXP7 199 aa8.55□□□□□ -1.04
SF1-216ENST00000486867 CD164L2Q6UWJ8 174 aa8.55□□□□□ -1.04
SF1-216ENST00000486867 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
SF1-216ENST00000486867 TGIF2-C20orf24A0A0A6YYL0 155 aa8.54□□□□□ -1.04
SF1-216ENST00000486867 IGKV3OR2-268A0A0C4DH90 116 aa8.54□□□□□ -1.04
SF1-216ENST00000486867 LOC389332A0A1B0GUA5 103 aa8.54□□□□□ -1.04
SF1-216ENST00000486867 C1orf196B1AJZ1 125 aa8.54□□□□□ -1.04
SF1-216ENST00000486867 NPSP0C0P6 89 aa8.54□□□□□ -1.04
SF1-216ENST00000486867 SS18Q15532 418 aa8.54□□□□□ -1.04
SF1-216ENST00000486867 ORMDL2Q53FV1 153 aa8.54□□□□□ -1.04
SF1-216ENST00000486867 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
SF1-216ENST00000486867 GVQW2A0A096LPI5 108 aaPredicted RBP8.53□□□□□ -1.04
SF1-216ENST00000486867 IFI27P40305 119 aaPredicted RBP8.53□□□□□ -1.04
SF1-216ENST00000486867 CFAP161Q6P656 301 aa8.53□□□□□ -1.04
SF1-216ENST00000486867 SLC7A5P1Q8MH63 180 aa8.53□□□□□ -1.04
SF1-216ENST00000486867 C9orf163Q8N9P6 203 aa8.53□□□□□ -1.04
SF1-216ENST00000486867 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
SF1-216ENST00000486867 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
SF1-216ENST00000486867 SLPIP03973 132 aa8.52□□□□□ -1.05
SF1-216ENST00000486867 XCL1P47992 114 aa8.52□□□□□ -1.05
SF1-216ENST00000486867 C2orf66Q6UXQ4 117 aa8.52□□□□□ -1.05
SF1-216ENST00000486867 CYSLTR1Q9Y271 337 aa8.52□□□□□ -1.05
SF1-216ENST00000486867 IGIPA6NJ69 53 aa8.51□□□□□ -1.05
SF1-216ENST00000486867 G0S2P27469 103 aa8.51□□□□□ -1.05
SF1-216ENST00000486867 FABP9Q0Z7S8 132 aa8.51□□□□□ -1.05
SF1-216ENST00000486867 RNASE13Q5GAN3 156 aaKnown RBP8.51□□□□□ -1.05
SF1-216ENST00000486867 Q8N1X5 172 aa8.51□□□□□ -1.05
SF1-216ENST00000486867 OPRPNQ99935 248 aaPredicted RBP8.51□□□□□ -1.05
SF1-216ENST00000486867 IGHV1-58A0A0C4DH39 117 aa8.5□□□□□ -1.05
SF1-216ENST00000486867 hDV102S1A0JD36 115 aa8.5□□□□□ -1.05
SF1-216ENST00000486867 LINC01620Q4KN68 170 aa8.5□□□□□ -1.05
SF1-216ENST00000486867 LINC00173Q6ZV60 143 aa8.5□□□□□ -1.05
SF1-216ENST00000486867 AMELXQ99217 191 aa8.5□□□□□ -1.05
SF1-216ENST00000486867 TRAV13-1A0A0B4J241 112 aa8.49□□□□□ -1.05
SF1-216ENST00000486867 IGHV3OR16-9A0A0B4J2B5 98 aa8.49□□□□□ -1.05
SF1-216ENST00000486867 LINC01549A6NIU2 74 aa8.49□□□□□ -1.05
SF1-216ENST00000486867 TOMM6Q96B49 74 aa8.49□□□□□ -1.05
SF1-216ENST00000486867 TMEM141Q96I45 108 aa8.49□□□□□ -1.05
SF1-216ENST00000486867 SDIM1Q6ZPB5 146 aa8.48□□□□□ -1.05
SF1-216ENST00000486867 PRSS3P2Q8NHM4 247 aa8.48□□□□□ -1.05
SF1-216ENST00000486867 TIMM17AQ99595 171 aa8.48□□□□□ -1.05
SF1-216ENST00000486867 SMCO4Q9NRQ5 59 aa8.48□□□□□ -1.05
SF1-216ENST00000486867 AP5S1Q9NUS5 200 aa8.48□□□□□ -1.05
SF1-216ENST00000486867 TRAPPC1Q9Y5R8 145 aa8.48□□□□□ -1.05
SF1-216ENST00000486867 IFITM10A6NMD0 228 aa8.47□□□□□ -1.05
SF1-216ENST00000486867 COX7A2LO14548 114 aa8.47□□□□□ -1.05
SF1-216ENST00000486867 CIRBPQ14011 172 aaKnown RBP8.47□□□□□ -1.05
SF1-216ENST00000486867 FAM19A3Q7Z5A8 133 aa8.47□□□□□ -1.05
SF1-216ENST00000486867 C18orf32Q8TCD1 76 aa8.47□□□□□ -1.05
SF1-216ENST00000486867 KRTAP4-5Q9BYR2 181 aa8.47□□□□□ -1.05
SF1-216ENST00000486867 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.46□□□□□ -1.06
SF1-216ENST00000486867 UBE2D1P51668 147 aa8.46□□□□□ -1.06
SF1-216ENST00000486867 HIGD2BQ4VC39 106 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms