RNA–Protein interactions for RNA: ENST00000486758.5

SHROOM3-208, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 3,766 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-208ENST00000486758 A0A087WW49 117 aa9.18□□□□□ -0.94
SHROOM3-208ENST00000486758 LINC01356Q8N9X3 169 aa9.18□□□□□ -0.94
SHROOM3-208ENST00000486758 PPDPFQ9H3Y8 114 aa9.18□□□□□ -0.94
SHROOM3-208ENST00000486758 COX8CQ7Z4L0 72 aa9.18□□□□□ -0.94
SHROOM3-208ENST00000486758 MRPL53Q96EL3 112 aaKnown RBP9.18□□□□□ -0.94
SHROOM3-208ENST00000486758 TIMM17AQ99595 171 aa9.18□□□□□ -0.94
SHROOM3-208ENST00000486758 PRIMA1Q86XR5 153 aa9.17□□□□□ -0.94
SHROOM3-208ENST00000486758 GPHB5Q86YW7 130 aa9.17□□□□□ -0.94
SHROOM3-208ENST00000486758 IGHV1OR15-1A0A075B7D0 117 aa9.17□□□□□ -0.94
SHROOM3-208ENST00000486758 IGIPA6NJ69 53 aa9.17□□□□□ -0.94
SHROOM3-208ENST00000486758 LENEPQ9Y5L5 61 aa9.17□□□□□ -0.94
SHROOM3-208ENST00000486758 ITPR2Q14571 2701 aa9.17□□□□□ -0.94
SHROOM3-208ENST00000486758 C5orf47Q569G3 176 aa9.17□□□□□ -0.94
SHROOM3-208ENST00000486758 Q96MF0 132 aa9.16□□□□□ -0.94
SHROOM3-208ENST00000486758 ATRQ13535 2644 aa9.16□□□□□ -0.94
SHROOM3-208ENST00000486758 C19orf54Q5BKX5 351 aa9.16□□□□□ -0.94
SHROOM3-208ENST00000486758 C18orf65Q6ZTR6 163 aa9.16□□□□□ -0.94
SHROOM3-208ENST00000486758 NBPF19A0A087WUL8 3843 aa9.16□□□□□ -0.94
SHROOM3-208ENST00000486758 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
SHROOM3-208ENST00000486758 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.94
SHROOM3-208ENST00000486758 Q9H8V8 135 aa9.15□□□□□ -0.94
SHROOM3-208ENST00000486758 RPL35AP18077 110 aaKnown RBP9.15□□□□□ -0.94
SHROOM3-208ENST00000486758 TMEM263Q8WUH6 116 aaKnown RBP9.15□□□□□ -0.94
SHROOM3-208ENST00000486758 TMEM223A0PJW6 202 aa9.15□□□□□ -0.95
SHROOM3-208ENST00000486758 A6NDX4 124 aa9.15□□□□□ -0.95
SHROOM3-208ENST00000486758 VPREB3Q9UKI3 123 aa9.15□□□□□ -0.95
SHROOM3-208ENST00000486758 LGALS9O00182 355 aa9.14□□□□□ -0.95
SHROOM3-208ENST00000486758 POLR2KP53803 58 aaKnown RBP9.14□□□□□ -0.95
SHROOM3-208ENST00000486758 CITED2Q99967 270 aaPredicted RBP9.14□□□□□ -0.95
SHROOM3-208ENST00000486758 ZNF469Q96JG9 3925 aaPredicted RBP9.14□□□□□ -0.95
SHROOM3-208ENST00000486758 IGHV4-4A0A075B6R2 117 aa9.14□□□□□ -0.95
SHROOM3-208ENST00000486758 IGLV4-3A0A075B6K6 122 aa9.14□□□□□ -0.95
SHROOM3-208ENST00000486758 Q9HAA7 133 aa9.14□□□□□ -0.95
SHROOM3-208ENST00000486758 STHQ8IWL8 128 aa9.13□□□□□ -0.95
SHROOM3-208ENST00000486758 LINC01619G3V211 115 aa9.13□□□□□ -0.95
SHROOM3-208ENST00000486758 NSUN5P1Q3KNT7 163 aa9.13□□□□□ -0.95
SHROOM3-208ENST00000486758 LINC01546A6NGU7 62 aa9.13□□□□□ -0.95
SHROOM3-208ENST00000486758 MUC4Q99102 2169 aa9.12□□□□□ -0.95
SHROOM3-208ENST00000486758 HIST1H4AP62805 103 aaKnown RBP9.12□□□□□ -0.95
SHROOM3-208ENST00000486758 ADAMTSL4-AS1Q5T5F5 129 aa9.12□□□□□ -0.95
SHROOM3-208ENST00000486758 STAB1Q9NY15 2570 aa9.12□□□□□ -0.95
SHROOM3-208ENST00000486758 A0A0B4J2C4 111 aa9.12□□□□□ -0.95
SHROOM3-208ENST00000486758 H7C423 109 aa9.12□□□□□ -0.95
SHROOM3-208ENST00000486758 NXPH4O95158 308 aa9.12□□□□□ -0.95
SHROOM3-208ENST00000486758 TRGV2A0A075B6R0 118 aa9.12□□□□□ -0.95
SHROOM3-208ENST00000486758 TRAV25A0A0B4J276 109 aa9.11□□□□□ -0.95
SHROOM3-208ENST00000486758 M0QY20 66 aa9.11□□□□□ -0.95
SHROOM3-208ENST00000486758 UBE2L6O14933 153 aa9.11□□□□□ -0.95
SHROOM3-208ENST00000486758 IGKV3D-7A0A0C4DH55 119 aa9.11□□□□□ -0.95
SHROOM3-208ENST00000486758 LINC00158P58513 81 aa9.11□□□□□ -0.95
SHROOM3-208ENST00000486758 RHOHQ15669 191 aa9.11□□□□□ -0.95
SHROOM3-208ENST00000486758 TMEM61Q8N0U2 210 aa9.11□□□□□ -0.95
SHROOM3-208ENST00000486758 CDKN2A-AS1Q9UH64 79 aa9.11□□□□□ -0.95
SHROOM3-208ENST00000486758 BAALC-AS2P0C853 105 aa9.1□□□□□ -0.95
SHROOM3-208ENST00000486758 TINCRA0A1B0GVN0 87 aa9.1□□□□□ -0.95
SHROOM3-208ENST00000486758 KRTAP10-9P60411 292 aa9.1□□□□□ -0.95
SHROOM3-208ENST00000486758 PFN2P35080 140 aa9.1□□□□□ -0.95
SHROOM3-208ENST00000486758 NBEAL1Q6ZS30 2694 aa9.09□□□□□ -0.95
SHROOM3-208ENST00000486758 TRBV27A0A0K0K1C4 114 aa9.09□□□□□ -0.95
SHROOM3-208ENST00000486758 PEMTQ9UBM1 199 aa9.09□□□□□ -0.95
SHROOM3-208ENST00000486758 IGHV1-58A0A0C4DH39 117 aa9.09□□□□□ -0.95
SHROOM3-208ENST00000486758 A0A0J9YX75 114 aa9.09□□□□□ -0.96
SHROOM3-208ENST00000486758 ODF3Q96PU9 254 aa9.09□□□□□ -0.96
SHROOM3-208ENST00000486758 KLK5Q9Y337 293 aaPredicted RBP9.09□□□□□ -0.96
SHROOM3-208ENST00000486758 NHLRC4P0CG21 123 aaPredicted RBP9.08□□□□□ -0.96
SHROOM3-208ENST00000486758 POM121L12Q8N7R1 296 aa9.08□□□□□ -0.96
SHROOM3-208ENST00000486758 Q9UF83 564 aa9.08□□□□□ -0.96
SHROOM3-208ENST00000486758 CSDC2Q9Y534 153 aaKnown RBP9.08□□□□□ -0.96
SHROOM3-208ENST00000486758 PAX4O43316 350 aa9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 MIAQ16674 131 aa9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 U3KQE9 123 aa9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 H3BT86 120 aa9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 CRPP02741 224 aa9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 PIK3CD-AS1Q5SR53 167 aa9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 TRBV30A0A0K0K1B3 111 aa9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 NDUFA7O95182 113 aa9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 DAZ2Q13117 558 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 DAZ4Q86SG3 579 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 DAZ3Q9NR90 486 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-208ENST00000486758 LINC00467Q9BRT7 94 aa9.06□□□□□ -0.96
SHROOM3-208ENST00000486758 ZNF415Q09FC8 603 aa9.06□□□□□ -0.96
SHROOM3-208ENST00000486758 DEFB130BP0DP73 79 aa9.05□□□□□ -0.96
SHROOM3-208ENST00000486758 DEFB130AP0DP74 79 aa9.05□□□□□ -0.96
SHROOM3-208ENST00000486758 MED14OSP0DP75 135 aa9.05□□□□□ -0.96
SHROOM3-208ENST00000486758 DSCR9P59020 149 aa9.05□□□□□ -0.96
SHROOM3-208ENST00000486758 LINC00315P59091 139 aa9.05□□□□□ -0.96
SHROOM3-208ENST00000486758 H3BUA1 57 aa9.05□□□□□ -0.96
SHROOM3-208ENST00000486758 SDIM1Q6ZPB5 146 aa9.05□□□□□ -0.96
SHROOM3-208ENST00000486758 DCANP1Q8TF63 244 aa9.05□□□□□ -0.96
SHROOM3-208ENST00000486758 ATP5G1P05496 136 aa9.04□□□□□ -0.96
SHROOM3-208ENST00000486758 KIF25-AS1Q9Y6Z4 181 aa9.04□□□□□ -0.96
SHROOM3-208ENST00000486758 VSIG2Q96IQ7 327 aa9.04□□□□□ -0.96
SHROOM3-208ENST00000486758 A0A096LPF7 62 aa9.04□□□□□ -0.96
SHROOM3-208ENST00000486758 LOC107984640A0A0U1RRK4 108 aa9.04□□□□□ -0.96
SHROOM3-208ENST00000486758 EIF4EBP3O60516 100 aaPredicted RBP9.03□□□□□ -0.96
SHROOM3-208ENST00000486758 HTN3P15516 51 aa9.03□□□□□ -0.96
SHROOM3-208ENST00000486758 PSMB8P28062 276 aa9.03□□□□□ -0.96
SHROOM3-208ENST00000486758 TRGV4A0A0C4DH28 118 aa9.03□□□□□ -0.96
SHROOM3-208ENST00000486758 KLLNB2CW77 178 aa9.03□□□□□ -0.96
SHROOM3-208ENST00000486758 K7EQG2 157 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms