RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 A0A0J9YY99 117 aa6.56□□□□□ -1.36
COL12A1-208ENST00000486533 A8MZ25 164 aa6.56□□□□□ -1.36
COL12A1-208ENST00000486533 M0QY20 66 aa6.56□□□□□ -1.36
COL12A1-208ENST00000486533 ZNF415Q09FC8 603 aa6.56□□□□□ -1.36
COL12A1-208ENST00000486533 SMAGPQ0VAQ4 97 aa6.56□□□□□ -1.36
COL12A1-208ENST00000486533 SLC25A29Q8N8R3 303 aa6.56□□□□□ -1.36
COL12A1-208ENST00000486533 PYGO1Q9Y3Y4 419 aa6.56□□□□□ -1.36
COL12A1-208ENST00000486533 M0QXV9 152 aa6.55□□□□□ -1.36
COL12A1-208ENST00000486533 APOMO95445 188 aa6.55□□□□□ -1.36
COL12A1-208ENST00000486533 CRYGDP07320 174 aa6.55□□□□□ -1.36
COL12A1-208ENST00000486533 EDN2P20800 178 aa6.55□□□□□ -1.36
COL12A1-208ENST00000486533 CASC10Q5T4H9 136 aa6.55□□□□□ -1.36
COL12A1-208ENST00000486533 MORN3Q6PF18 240 aaPredicted RBP6.55□□□□□ -1.36
COL12A1-208ENST00000486533 C20orf203Q8NBC4 194 aa6.55□□□□□ -1.36
COL12A1-208ENST00000486533 DNAJC30Q96LL9 226 aa6.55□□□□□ -1.36
COL12A1-208ENST00000486533 SPATA25Q9BR10 227 aa6.55□□□□□ -1.36
COL12A1-208ENST00000486533 C1QTNF4Q9BXJ3 329 aa6.55□□□□□ -1.36
COL12A1-208ENST00000486533 SELENOKQ9Y6D0 94 aa6.55□□□□□ -1.36
COL12A1-208ENST00000486533 TENM2Q9NT68 2774 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 LOC107984156A0A0G2JMH3 177 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 GAGE12HA6NDE8 117 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 UBE2D3P61077 147 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 UBE2D2P62837 147 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 DEFB114Q30KQ6 69 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 ARL17AQ8IVW1 177 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 MTURNQ8N3F0 131 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 C10orf126Q8N4M7 172 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 SPXQ9BT56 116 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 SPANXA1Q9NS26 97 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 PRO1854Q9UHT4 67 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 TNFRSF18Q9Y5U5 241 aa6.54□□□□□ -1.36
COL12A1-208ENST00000486533 TMEM223A0PJW6 202 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 A8MTW9 85 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 TSPAN13O95857 204 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 TSHBP01222 138 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 PSMB2P49721 201 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 DEFB1P60022 68 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 WFDC2Q14508 124 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 SPINK13Q1W4C9 94 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 PPDPFLQ8WWR9 84 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 COPS9Q8WXC6 57 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 LINC00467Q9BRT7 94 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 CSMD3Q7Z407 3707 aa6.53□□□□□ -1.36
COL12A1-208ENST00000486533 TMEM262E9PQX1 116 aa6.52□□□□□ -1.36
COL12A1-208ENST00000486533 M0R2P5 195 aa6.52□□□□□ -1.36
COL12A1-208ENST00000486533 IGHV3-30P01768 117 aa6.52□□□□□ -1.36
COL12A1-208ENST00000486533 SCGB1C2P0DMR2 95 aa6.52□□□□□ -1.36
COL12A1-208ENST00000486533 IGHV3-30-5P0DP03 117 aa6.52□□□□□ -1.36
COL12A1-208ENST00000486533 RPL39P62891 51 aaKnown RBP6.52□□□□□ -1.36
COL12A1-208ENST00000486533 ETDBQ3ZM63 59 aa6.52□□□□□ -1.36
COL12A1-208ENST00000486533 CFAP126Q5VTH2 177 aa6.52□□□□□ -1.36
COL12A1-208ENST00000486533 ZFAND6Q6FIF0 208 aa6.52□□□□□ -1.36
COL12A1-208ENST00000486533 WFDC10AQ9H1F0 79 aa6.52□□□□□ -1.36
COL12A1-208ENST00000486533 PRO0461Q9UI25 63 aa6.52□□□□□ -1.36
COL12A1-208ENST00000486533 DNAH7Q8WXX0 4024 aa6.52□□□□□ -1.37
COL12A1-208ENST00000486533 TEN1Q86WV5 123 aa6.52□□□□□ -1.37
COL12A1-208ENST00000486533 TMEM61Q8N0U2 210 aa6.52□□□□□ -1.37
COL12A1-208ENST00000486533 SPAG8Q99932 426 aaPredicted RBP6.52□□□□□ -1.37
COL12A1-208ENST00000486533 TIMM21Q9BVV7 248 aa6.52□□□□□ -1.37
COL12A1-208ENST00000486533 RETNQ9HD89 108 aa6.52□□□□□ -1.37
COL12A1-208ENST00000486533 MUC4Q99102 2169 aa6.52□□□□□ -1.37
COL12A1-208ENST00000486533 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 A0A1B0GV72 72 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 SPRY2O43597 315 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 IGKV3-20P01619 116 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 P0DMU3 169 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 FAM231AP0DMU4 169 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 FAM231CP0DMU5 169 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 FOXI1Q12951 378 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 AMTNQ6UX39 209 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 FAM110AQ9BQ89 295 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 JPT2Q9H910 190 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 ERG28Q9UKR5 140 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 AGRNO00468 2067 aa6.51□□□□□ -1.37
COL12A1-208ENST00000486533 STARD9Q9P2P6 4700 aa6.5□□□□□ -1.37
COL12A1-208ENST00000486533 TRAV12-2A0A075B6T6 113 aa6.5□□□□□ -1.37
COL12A1-208ENST00000486533 RBMY1BA6NDE4 496 aaKnown RBP6.5□□□□□ -1.37
COL12A1-208ENST00000486533 RBMY1EA6NEQ0 496 aaKnown RBP6.5□□□□□ -1.37
COL12A1-208ENST00000486533 INSP01308 110 aa6.5□□□□□ -1.37
COL12A1-208ENST00000486533 RBMY1DP0C7P1 496 aaKnown RBP6.5□□□□□ -1.37
COL12A1-208ENST00000486533 ZNF22P17026 224 aaPredicted RBP6.5□□□□□ -1.37
COL12A1-208ENST00000486533 AZU1P20160 251 aa6.5□□□□□ -1.37
COL12A1-208ENST00000486533 ATXN8Q156A1 80 aa6.5□□□□□ -1.37
COL12A1-208ENST00000486533 ZNRF2Q8NHG8 242 aa6.5□□□□□ -1.37
COL12A1-208ENST00000486533 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
COL12A1-208ENST00000486533 TINCRA0A1B0GVN0 87 aa6.49□□□□□ -1.37
COL12A1-208ENST00000486533 TIMM17BO60830 172 aa6.49□□□□□ -1.37
COL12A1-208ENST00000486533 COX6CP09669 75 aa6.49□□□□□ -1.37
COL12A1-208ENST00000486533 CMC4P56277 68 aaPredicted RBP6.49□□□□□ -1.37
COL12A1-208ENST00000486533 MRPS36P82909 103 aaKnown RBP6.49□□□□□ -1.37
COL12A1-208ENST00000486533 RNF183Q96D59 192 aa6.49□□□□□ -1.37
COL12A1-208ENST00000486533 AMELXQ99217 191 aa6.49□□□□□ -1.37
COL12A1-208ENST00000486533 TRAV25A0A0B4J276 109 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 CFC1BP0CG36 223 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 CFC1P0CG37 223 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 IFITM1P13164 125 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 EMP1P54849 157 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 Q1RN00 199 aa6.48□□□□□ -1.37
COL12A1-208ENST00000486533 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms