RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	MRPL35	Q9NZE8	188 aa	Known RBP	5.17	□□□□□ -1.58
PUDP-204	ENST00000486446	CSDC2	Q9Y534	153 aa	Known RBP	5.17	□□□□□ -1.58
PUDP-204	ENST00000486446	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.17	□□□□□ -1.58
PUDP-204	ENST00000486446	TRGV11	A0A075B6L2	103 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	TRBV25-1	A0A075B6N4	114 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446		A0A0J9YWU9	116 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446		A0A1B0GWB2	263 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446		K7EP34	96 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	ZNF688	P0C7X2	276 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	NMU	P48645	174 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	PAPPA-AS1	Q5QFB9	102 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	AMMECR1L	Q6DCA0	310 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	GTF2H5	Q6ZYL4	71 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	STH	Q8IWL8	128 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	OR5A1	Q8NGJ0	315 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	RNF183	Q96D59	192 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	CHAC1	Q9BUX1	264 aa		5.16	□□□□□ -1.58
PUDP-204	ENST00000486446	MUC4	Q99102	2169 aa		5.15	□□□□□ -1.58
PUDP-204	ENST00000486446	TRAV26-2	A0A0B4J265	109 aa		5.15	□□□□□ -1.59
PUDP-204	ENST00000486446	TRAV12-3	A0A0B4J271	114 aa		5.15	□□□□□ -1.59
PUDP-204	ENST00000486446	TRBV27	A0A0K0K1C4	114 aa		5.15	□□□□□ -1.59
PUDP-204	ENST00000486446	PRSS29P	A6NIE9	313 aa		5.15	□□□□□ -1.59
PUDP-204	ENST00000486446		E9PLD3	99 aa		5.15	□□□□□ -1.59
PUDP-204	ENST00000486446	CRYGD	P07320	174 aa		5.15	□□□□□ -1.59
PUDP-204	ENST00000486446	C14orf178	Q8N769	122 aa	Predicted RBP	5.15	□□□□□ -1.59
PUDP-204	ENST00000486446	TMEM141	Q96I45	108 aa		5.15	□□□□□ -1.59
PUDP-204	ENST00000486446	TIMM17A	Q99595	171 aa		5.15	□□□□□ -1.59
PUDP-204	ENST00000486446	CST9L	Q9H4G1	147 aa		5.15	□□□□□ -1.59
PUDP-204	ENST00000486446	HUWE1	Q7Z6Z7	4374 aa	Known RBP	5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	TRBV7-3	A0A075B6L6	115 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446		A0A1W2PPM0	123 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	IGIP	A6NJ69	53 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	KNCN	A6PVL3	124 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	USP17L23	D6RBM5	183 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446		M0QXV9	152 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	VPREB1	P12018	145 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	DEFB1	P60022	68 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	C2orf66	Q6UXQ4	117 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	CEND1	Q8N111	149 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	OR11H2	Q8NH07	326 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	BAALC	Q8WXS3	180 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446	SCGB3A1	Q96QR1	104 aa		5.14	□□□□□ -1.59
PUDP-204	ENST00000486446		M0QY20	66 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	SMIM13	P0DJ93	91 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	FXYD2	P54710	66 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	RHOH	Q15669	191 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	OCIAD2	Q56VL3	154 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	MORN3	Q6PF18	240 aa	Predicted RBP	5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	ZFP2	Q6ZN57	461 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	NEGR1	Q7Z3B1	354 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	TRPT1	Q86TN4	253 aa	Known RBP	5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	MAPKAPK5-AS1	Q8N8E1	139 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	RPL39L	Q96EH5	51 aa	Known RBP	5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	LYST	Q99698	3801 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	MDFIC	Q9P1T7	246 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	CYSLTR1	Q9Y271	337 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	CSMD3	Q7Z407	3707 aa		5.13	□□□□□ -1.59
PUDP-204	ENST00000486446	MYMX	A0A1B0GTQ4	84 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446	NUPR2	A6NF83	97 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446		A8MWV9	139 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446		K7ERU9	68 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446		M0R2P5	195 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446	TSHB	P01222	138 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446	CRYBA4	P53673	196 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446	SPINK13	Q1W4C9	94 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446	ZNF876P	Q49A33	203 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446	SUMO4	Q6EEV6	95 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446	NTN5	Q8WTR8	489 aa	Predicted RBP	5.12	□□□□□ -1.59
PUDP-204	ENST00000486446	KIR2DL4	Q99706	377 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446	SPANXA1	Q9NS26	97 aa		5.12	□□□□□ -1.59
PUDP-204	ENST00000486446	IGLV4-69	A0A075B6H9	119 aa		5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	TRAV12-2	A0A075B6T6	113 aa		5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	C11orf86	A6NJI1	115 aa		5.11	□□□□□ -1.59
PUDP-204	ENST00000486446		H3BUT2	72 aa		5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	DEFB4A	O15263	64 aa		5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	FABP2	P12104	132 aa		5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	PMVK	Q15126	192 aa		5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	CD164L2	Q6UWJ8	174 aa		5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	NFE4	Q86UQ8	179 aa		5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	C11orf45	Q8TAV5	145 aa		5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	SPANXB1	Q9NS25	103 aa	Predicted RBP	5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	KLK5	Q9Y337	293 aa	Predicted RBP	5.11	□□□□□ -1.59
PUDP-204	ENST00000486446	SDHAF1	A6NFY7	115 aa		5.1	□□□□□ -1.59
PUDP-204	ENST00000486446		F5H697	171 aa		5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	RHOD	O00212	210 aa		5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	IGKV3-20	P01619	116 aa		5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	MGP	P08493	103 aa		5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	NANOS2	P60321	138 aa	Known RBP	5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	DNAJC30	Q96LL9	226 aa		5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	C1QTNF4	Q9BXJ3	329 aa		5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	TTTY13	Q9BZ97	58 aa		5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	C11orf68	Q9H3H3	251 aa	Known RBP	5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	PYGO1	Q9Y3Y4	419 aa		5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	SPCS1	Q9Y6A9	102 aa		5.1	□□□□□ -1.59
PUDP-204	ENST00000486446	IGHV4-28	A0A0C4DH34	117 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	IGLL5	B9A064	214 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446		I3L3M4	83 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	TSPAN13	O95857	204 aa		5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms