RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ZFP30Q9Y2G7 519 aa4.64□□□□□ -1.67
XRN1-212ENST00000486211 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.63□□□□□ -1.67
XRN1-212ENST00000486211 A0A1W2PRE2 83 aa4.63□□□□□ -1.67
XRN1-212ENST00000486211 IGKV2-29A2NJV5 120 aaPredicted RBP4.63□□□□□ -1.67
XRN1-212ENST00000486211 MGPP08493 103 aa4.63□□□□□ -1.67
XRN1-212ENST00000486211 CDC34P49427 236 aaPredicted RBP4.63□□□□□ -1.67
XRN1-212ENST00000486211 SSTP61278 116 aa4.63□□□□□ -1.67
XRN1-212ENST00000486211 RNASEKQ6P5S7 137 aaKnown RBP4.63□□□□□ -1.67
XRN1-212ENST00000486211 RASL11AQ6T310 242 aa4.63□□□□□ -1.67
XRN1-212ENST00000486211 FP248Q71RG6 208 aaPredicted RBP4.63□□□□□ -1.67
XRN1-212ENST00000486211 Q8N9P0 234 aaPredicted RBP4.63□□□□□ -1.67
XRN1-212ENST00000486211 SCGB1C1Q8TD33 95 aa4.63□□□□□ -1.67
XRN1-212ENST00000486211 WFDC1Q9HC57 220 aa4.63□□□□□ -1.67
XRN1-212ENST00000486211 H7C423 109 aa4.62□□□□□ -1.67
XRN1-212ENST00000486211 LTAP01374 205 aa4.62□□□□□ -1.67
XRN1-212ENST00000486211 NTF3P20783 257 aa4.62□□□□□ -1.67
XRN1-212ENST00000486211 SS18Q15532 418 aa4.62□□□□□ -1.67
XRN1-212ENST00000486211 NIT2Q9NQR4 276 aa4.62□□□□□ -1.67
XRN1-212ENST00000486211 TMEM167BQ9NRX6 74 aa4.62□□□□□ -1.67
XRN1-212ENST00000486211 HSPB11Q9Y547 144 aa4.62□□□□□ -1.67
XRN1-212ENST00000486211 TLX1NBP0CAT3 122 aa4.61□□□□□ -1.67
XRN1-212ENST00000486211 ZNF25P17030 456 aaPredicted RBP4.61□□□□□ -1.67
XRN1-212ENST00000486211 SMIM3Q9BZL3 60 aa4.61□□□□□ -1.67
XRN1-212ENST00000486211 MRPL35Q9NZE8 188 aaKnown RBP4.61□□□□□ -1.67
XRN1-212ENST00000486211 G3V3Q6 166 aa4.6□□□□□ -1.67
XRN1-212ENST00000486211 COX7A2LO14548 114 aa4.6□□□□□ -1.67
XRN1-212ENST00000486211 NUPR1O60356 82 aa4.6□□□□□ -1.67
XRN1-212ENST00000486211 CNPY1Q3B7I2 92 aa4.6□□□□□ -1.67
XRN1-212ENST00000486211 HIST1H2BAQ96A08 127 aa4.6□□□□□ -1.67
XRN1-212ENST00000486211 FMC1Q96HJ9 113 aa4.6□□□□□ -1.67
XRN1-212ENST00000486211 CTDSP1Q9GZU7 261 aa4.6□□□□□ -1.67
XRN1-212ENST00000486211 SYNE2Q8WXH0 6885 aaKnown RBP4.59□□□□□ -1.67
XRN1-212ENST00000486211 NCR2O95944 276 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 CXorf1O96002 111 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 SPAG11BQ08648 103 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 LRRC37A5PQ49AS3 106 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 FAM229BQ4G0N7 80 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 GAGE2EQ4V326 116 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 C10orf25Q5T742 122 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 OR2D3Q8NGH3 330 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 IMMP2LQ96T52 175 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 SMDT1Q9H4I9 107 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 GAGE2DQ9UEU5 116 aa4.59□□□□□ -1.67
XRN1-212ENST00000486211 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
XRN1-212ENST00000486211 GAGE10A6NGK3 116 aa4.58□□□□□ -1.68
XRN1-212ENST00000486211 FAM74A7A6NL05 159 aa4.58□□□□□ -1.68
XRN1-212ENST00000486211 KRTAP4-16G5E9R7 235 aaPredicted RBP4.58□□□□□ -1.68
XRN1-212ENST00000486211 M0R2T5 61 aa4.58□□□□□ -1.68
XRN1-212ENST00000486211 RPL28P46779 137 aaKnown RBP4.58□□□□□ -1.68
XRN1-212ENST00000486211 C9orf129Q5T035 196 aaKnown RBP4.58□□□□□ -1.68
XRN1-212ENST00000486211 TRIQKQ629K1 86 aa4.58□□□□□ -1.68
XRN1-212ENST00000486211 CDC42SE2Q9NRR3 84 aa4.58□□□□□ -1.68
XRN1-212ENST00000486211 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
XRN1-212ENST00000486211 SIX6O95475 246 aa4.57□□□□□ -1.68
XRN1-212ENST00000486211 APCSP02743 223 aa4.57□□□□□ -1.68
XRN1-212ENST00000486211 UBE2G2P60604 165 aa4.57□□□□□ -1.68
XRN1-212ENST00000486211 UBE2G1P62253 170 aa4.57□□□□□ -1.68
XRN1-212ENST00000486211 C6orf48Q9UBA6 75 aa4.57□□□□□ -1.68
XRN1-212ENST00000486211 CENPXA8MT69 81 aa4.56□□□□□ -1.68
XRN1-212ENST00000486211 PLA2G10O15496 165 aa4.56□□□□□ -1.68
XRN1-212ENST00000486211 BCE1O60756 84 aa4.56□□□□□ -1.68
XRN1-212ENST00000486211 IGKV2-30P06310 120 aa4.56□□□□□ -1.68
XRN1-212ENST00000486211 IGLC6P0CF74 106 aa4.56□□□□□ -1.68
XRN1-212ENST00000486211 C5orf38Q86SI9 138 aa4.56□□□□□ -1.68
XRN1-212ENST00000486211 TMEM101Q96IK0 257 aa4.56□□□□□ -1.68
XRN1-212ENST00000486211 BTF3L4Q96K17 158 aa4.56□□□□□ -1.68
XRN1-212ENST00000486211 NUDT15Q9NV35 164 aa4.56□□□□□ -1.68
XRN1-212ENST00000486211 IGKV2D-26A0A0A0MRZ7 120 aa4.55□□□□□ -1.68
XRN1-212ENST00000486211 C1orf196B1AJZ1 125 aa4.55□□□□□ -1.68
XRN1-212ENST00000486211 F8WDY8 70 aa4.55□□□□□ -1.68
XRN1-212ENST00000486211 CTRLP40313 264 aa4.55□□□□□ -1.68
XRN1-212ENST00000486211 UNQ6190/PRO20217Q6UXQ8 127 aa4.55□□□□□ -1.68
XRN1-212ENST00000486211 MRPL52Q86TS9 123 aaKnown RBP4.55□□□□□ -1.68
XRN1-212ENST00000486211 KRTAP13-1Q8IUC0 172 aa4.55□□□□□ -1.68
XRN1-212ENST00000486211 GATD1Q8NB37 220 aa4.55□□□□□ -1.68
XRN1-212ENST00000486211 OR10D4PQ8NGN7 298 aa4.55□□□□□ -1.68
XRN1-212ENST00000486211 NKX6-2Q9C056 277 aaPredicted RBP4.55□□□□□ -1.68
XRN1-212ENST00000486211 NDUFA1O15239 70 aa4.54□□□□□ -1.68
XRN1-212ENST00000486211 ATP6V0CP27449 155 aa4.54□□□□□ -1.68
XRN1-212ENST00000486211 PCP4P48539 62 aa4.54□□□□□ -1.68
XRN1-212ENST00000486211 ZNF726P1Q15940 193 aa4.54□□□□□ -1.68
XRN1-212ENST00000486211 TMEM241Q24JQ0 296 aa4.54□□□□□ -1.68
XRN1-212ENST00000486211 RPL39LQ96EH5 51 aaKnown RBP4.54□□□□□ -1.68
XRN1-212ENST00000486211 PSMG3Q9BT73 122 aaPredicted RBP4.54□□□□□ -1.68
XRN1-212ENST00000486211 ACTR3CQ9C0K3 210 aaPredicted RBP4.54□□□□□ -1.68
XRN1-212ENST00000486211 NPSP0C0P6 89 aa4.53□□□□□ -1.68
XRN1-212ENST00000486211 S100A5P33763 92 aa4.53□□□□□ -1.68
XRN1-212ENST00000486211 C3orf22Q8N5N4 141 aa4.53□□□□□ -1.68
XRN1-212ENST00000486211 PPP1R1CQ8WVI7 109 aa4.53□□□□□ -1.68
XRN1-212ENST00000486211 TPPP3Q9BW30 176 aa4.53□□□□□ -1.68
XRN1-212ENST00000486211 C22orf24Q9Y442 160 aa4.53□□□□□ -1.68
XRN1-212ENST00000486211 ALG5Q9Y673 324 aa4.53□□□□□ -1.68
XRN1-212ENST00000486211 A0A1B0GVG6 124 aa4.52□□□□□ -1.69
XRN1-212ENST00000486211 SDHAF1A6NFY7 115 aa4.52□□□□□ -1.69
XRN1-212ENST00000486211 INMT-MINDY4F8WBC2 141 aa4.52□□□□□ -1.69
XRN1-212ENST00000486211 LYRM1O43325 122 aa4.52□□□□□ -1.69
XRN1-212ENST00000486211 MBP02144 154 aa4.52□□□□□ -1.69
XRN1-212ENST00000486211 TRGC1P0CF51 173 aa4.52□□□□□ -1.69
XRN1-212ENST00000486211 IL7P13232 177 aa4.52□□□□□ -1.69
XRN1-212ENST00000486211 AKR1C3P42330 323 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms