RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 PRSS1P07477 247 aa4.54□□□□□ -1.68
VPS50-218ENST00000485994 INAFM2P0DMQ5 153 aa4.54□□□□□ -1.68
VPS50-218ENST00000485994 PMCHP20382 165 aa4.54□□□□□ -1.68
VPS50-218ENST00000485994 CNBPP62633 177 aaKnown RBP4.54□□□□□ -1.68
VPS50-218ENST00000485994 UQCC3Q6UW78 93 aa4.54□□□□□ -1.68
VPS50-218ENST00000485994 MRPL52Q86TS9 123 aaKnown RBP4.54□□□□□ -1.68
VPS50-218ENST00000485994 COMMD7Q86VX2 200 aa4.54□□□□□ -1.68
VPS50-218ENST00000485994 RPL39LQ96EH5 51 aaKnown RBP4.54□□□□□ -1.68
VPS50-218ENST00000485994 ST20Q9HBF5 79 aa4.54□□□□□ -1.68
VPS50-218ENST00000485994 CSDC2Q9Y534 153 aaKnown RBP4.54□□□□□ -1.68
VPS50-218ENST00000485994 TRBV24-1A0A075B6N3 115 aa4.53□□□□□ -1.68
VPS50-218ENST00000485994 VCYO14598 125 aa4.53□□□□□ -1.68
VPS50-218ENST00000485994 RPL32P62910 135 aaKnown RBP4.53□□□□□ -1.68
VPS50-218ENST00000485994 C10orf91Q5T1B1 145 aa4.53□□□□□ -1.68
VPS50-218ENST00000485994 FAM104BQ5XKR9 115 aa4.53□□□□□ -1.68
VPS50-218ENST00000485994 CFAP161Q6P656 301 aa4.53□□□□□ -1.68
VPS50-218ENST00000485994 SDIM1Q6ZPB5 146 aa4.53□□□□□ -1.68
VPS50-218ENST00000485994 DMBT1Q9UGM3 2413 aaPredicted RBP4.53□□□□□ -1.68
VPS50-218ENST00000485994 PPP1R2P9O14990 202 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 TCAPO15273 167 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 CCL25O15444 150 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 GAS8-AS1O95177 125 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 TSHBP01222 138 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 APCSP02743 223 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 PLA2G1BP04054 148 aaKnown RBP4.52□□□□□ -1.69
VPS50-218ENST00000485994 FGF6P10767 208 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 CIRBPQ14011 172 aaKnown RBP4.52□□□□□ -1.69
VPS50-218ENST00000485994 ADIRFQ15847 76 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 AMN1Q8IY45 258 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 OR5A1Q8NGJ0 315 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 C20orf78Q9BR46 151 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 CDC42SE2Q9NRR3 84 aa4.52□□□□□ -1.69
VPS50-218ENST00000485994 MYCBP2O75592 4640 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 IGLV10-54A0A075B6I4 117 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 TMEM238LA0A1B0GVL6 79 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 PHOX2AO14813 284 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 HLA-DQA1P01909 254 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 S100A8P05109 93 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 SUMO2P61956 95 aaKnown RBP4.51□□□□□ -1.69
VPS50-218ENST00000485994 SMAGPQ0VAQ4 97 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 AMMECR1LQ6DCA0 310 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 SCXQ7RTU7 201 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 NRACQ8N912 160 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 CIRBP-AS1Q8TBR5 109 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 TMEM101Q96IK0 257 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 BTF3L4Q96K17 158 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 SEC11CQ9BY50 192 aa4.51□□□□□ -1.69
VPS50-218ENST00000485994 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.5□□□□□ -1.69
VPS50-218ENST00000485994 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
VPS50-218ENST00000485994 A0A1B0GXF2 115 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 IGKV2-29A2NJV5 120 aaPredicted RBP4.5□□□□□ -1.69
VPS50-218ENST00000485994 PRSS47A8MTI9 375 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 F8W036 122 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 PPBPP02775 128 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 SLPIP03973 132 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 RPS10P46783 165 aaKnown RBP4.5□□□□□ -1.69
VPS50-218ENST00000485994 KRTAP10-4P60372 401 aaPredicted RBP4.5□□□□□ -1.69
VPS50-218ENST00000485994 PNRC1Q12796 327 aaPredicted RBP4.5□□□□□ -1.69
VPS50-218ENST00000485994 LINC01620Q4KN68 170 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 MRPL51Q4U2R6 128 aaKnown RBP4.5□□□□□ -1.69
VPS50-218ENST00000485994 RNASEKQ6P5S7 137 aaKnown RBP4.5□□□□□ -1.69
VPS50-218ENST00000485994 CLPSL2Q6UWE3 100 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 ATP5L2Q7Z4Y8 100 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 ZNF664Q8N3J9 261 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 DEFB104AQ8WTQ1 72 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 CHCHD10Q8WYQ3 142 aaPredicted RBP4.5□□□□□ -1.69
VPS50-218ENST00000485994 ANAPC16Q96DE5 110 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 KIR2DL4Q99706 377 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 TIMM21Q9BVV7 248 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 AP5S1Q9NUS5 200 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 CARHSP1Q9Y2V2 147 aaKnown RBP4.5□□□□□ -1.69
VPS50-218ENST00000485994 HERC1Q15751 4861 aa4.5□□□□□ -1.69
VPS50-218ENST00000485994 IGHV3-64A0A075B6Q5 118 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 LINC00959A0A1B0GUT2 108 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 hDV102S1A0JD36 115 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 C7orf77A4D0Y5 90 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 GAGE12HA6NDE8 117 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 CKS2P33552 79 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 HBBP68871 147 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 HAMPP81172 84 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 FOXI1Q12951 378 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 C15orf56Q8N910 161 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 TMEM18Q96B42 140 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 TMEM242Q9NWH2 141 aa4.49□□□□□ -1.69
VPS50-218ENST00000485994 GVQW2A0A096LPI5 108 aaPredicted RBP4.48□□□□□ -1.69
VPS50-218ENST00000485994 KRTAP29-1A8MX34 341 aaPredicted RBP4.48□□□□□ -1.69
VPS50-218ENST00000485994 C1orf196B1AJZ1 125 aa4.48□□□□□ -1.69
VPS50-218ENST00000485994 TNFRSF6BO95407 300 aa4.48□□□□□ -1.69
VPS50-218ENST00000485994 FCER1GP30273 86 aa4.48□□□□□ -1.69
VPS50-218ENST00000485994 CAMPP49913 170 aa4.48□□□□□ -1.69
VPS50-218ENST00000485994 SS18Q15532 418 aa4.48□□□□□ -1.69
VPS50-218ENST00000485994 CD164L2Q6UWJ8 174 aa4.48□□□□□ -1.69
VPS50-218ENST00000485994 SLC7A5P1Q8MH63 180 aa4.48□□□□□ -1.69
VPS50-218ENST00000485994 UBE2D4Q9Y2X8 147 aa4.48□□□□□ -1.69
VPS50-218ENST00000485994 IGHV1-58A0A0C4DH39 117 aa4.47□□□□□ -1.69
VPS50-218ENST00000485994 SMKR1H3BMG3 65 aa4.47□□□□□ -1.69
VPS50-218ENST00000485994 MT-ND4LP03901 98 aa4.47□□□□□ -1.69
VPS50-218ENST00000485994 IMMP2LQ96T52 175 aa4.47□□□□□ -1.69
VPS50-218ENST00000485994 LAMTOR2Q9Y2Q5 125 aa4.47□□□□□ -1.69
VPS50-218ENST00000485994 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms