RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 TRAV9-1A0A075B6T8 112 aa7.9□□□□□ -1.14
HLA-DOA-204ENST00000485901 IGLV5-52A0A0A0MRZ9 124 aa7.9□□□□□ -1.14
HLA-DOA-204ENST00000485901 C7orf77A4D0Y5 90 aa7.9□□□□□ -1.14
HLA-DOA-204ENST00000485901 LECT2O14960 151 aa7.9□□□□□ -1.14
HLA-DOA-204ENST00000485901 TCAPO15273 167 aa7.9□□□□□ -1.14
HLA-DOA-204ENST00000485901 S100PP25815 95 aa7.9□□□□□ -1.14
HLA-DOA-204ENST00000485901 FUSP35637 526 aaKnown RBP eCLIP7.9□□□□□ -1.14
HLA-DOA-204ENST00000485901 NPYP01303 97 aa7.89□□□□□ -1.15
HLA-DOA-204ENST00000485901 SMAGPQ0VAQ4 97 aa7.89□□□□□ -1.15
HLA-DOA-204ENST00000485901 WFDC2Q14508 124 aa7.89□□□□□ -1.15
HLA-DOA-204ENST00000485901 C14orf177Q52M58 125 aa7.89□□□□□ -1.15
HLA-DOA-204ENST00000485901 CLRN3Q8NCR9 226 aa7.89□□□□□ -1.15
HLA-DOA-204ENST00000485901 PRELID3AQ96N28 172 aa7.89□□□□□ -1.15
HLA-DOA-204ENST00000485901 LAMTOR2Q9Y2Q5 125 aa7.89□□□□□ -1.15
HLA-DOA-204ENST00000485901 IGLV10-54A0A075B6I4 117 aa7.88□□□□□ -1.15
HLA-DOA-204ENST00000485901 RHEBQ15382 184 aa7.88□□□□□ -1.15
HLA-DOA-204ENST00000485901 DGAT2L7PQ6IED9 249 aa7.88□□□□□ -1.15
HLA-DOA-204ENST00000485901 MRPL52Q86TS9 123 aaKnown RBP7.88□□□□□ -1.15
HLA-DOA-204ENST00000485901 OR5A1Q8NGJ0 315 aa7.88□□□□□ -1.15
HLA-DOA-204ENST00000485901 TMEM18Q96B42 140 aa7.88□□□□□ -1.15
HLA-DOA-204ENST00000485901 RPS10P5Q9NQ39 176 aa7.88□□□□□ -1.15
HLA-DOA-204ENST00000485901 UBR4Q5T4S7 5183 aa7.87□□□□□ -1.15
HLA-DOA-204ENST00000485901 KRTAP29-1A8MX34 341 aaPredicted RBP7.87□□□□□ -1.15
HLA-DOA-204ENST00000485901 J3QL48 77 aa7.87□□□□□ -1.15
HLA-DOA-204ENST00000485901 HLA-DQA1P01909 254 aa7.87□□□□□ -1.15
HLA-DOA-204ENST00000485901 PLA2G1BP04054 148 aaKnown RBP7.87□□□□□ -1.15
HLA-DOA-204ENST00000485901 NDUFA5Q16718 116 aa7.87□□□□□ -1.15
HLA-DOA-204ENST00000485901 KRTAP26-1Q6PEX3 210 aa7.87□□□□□ -1.15
HLA-DOA-204ENST00000485901 SMIM2Q9BVW6 85 aa7.87□□□□□ -1.15
HLA-DOA-204ENST00000485901 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.86□□□□□ -1.15
HLA-DOA-204ENST00000485901 IGKV3OR2-268A0A0C4DH90 116 aa7.86□□□□□ -1.15
HLA-DOA-204ENST00000485901 PRSS47A8MTI9 375 aa7.86□□□□□ -1.15
HLA-DOA-204ENST00000485901 SMR3BP02814 79 aaPredicted RBP7.86□□□□□ -1.15
HLA-DOA-204ENST00000485901 RAB5AP20339 215 aa7.86□□□□□ -1.15
HLA-DOA-204ENST00000485901 CDC42SE2Q9NRR3 84 aa7.86□□□□□ -1.15
HLA-DOA-204ENST00000485901 CSDC2Q9Y534 153 aaKnown RBP7.86□□□□□ -1.15
HLA-DOA-204ENST00000485901 USP17L23D6RBM5 183 aa7.85□□□□□ -1.15
HLA-DOA-204ENST00000485901 APOC3P02656 99 aa7.85□□□□□ -1.15
HLA-DOA-204ENST00000485901 COX19Q49B96 90 aa7.85□□□□□ -1.15
HLA-DOA-204ENST00000485901 SERTAD4-AS1Q5TG53 156 aa7.85□□□□□ -1.15
HLA-DOA-204ENST00000485901 ZNF664Q8N3J9 261 aa7.85□□□□□ -1.15
HLA-DOA-204ENST00000485901 MAP1LC3AQ9H492 121 aa7.85□□□□□ -1.15
HLA-DOA-204ENST00000485901 DNAH8Q96JB1 4490 aa7.84□□□□□ -1.15
HLA-DOA-204ENST00000485901 LOC389332A0A1B0GUA5 103 aa7.84□□□□□ -1.15
HLA-DOA-204ENST00000485901 SNAPINO95295 136 aa7.84□□□□□ -1.15
HLA-DOA-204ENST00000485901 SVBPQ8N300 66 aa7.84□□□□□ -1.15
HLA-DOA-204ENST00000485901 TIMM21Q9BVV7 248 aa7.84□□□□□ -1.15
HLA-DOA-204ENST00000485901 GNB1LQ9BYB4 327 aa7.84□□□□□ -1.15
HLA-DOA-204ENST00000485901 UBE2D4Q9Y2X8 147 aa7.84□□□□□ -1.15
HLA-DOA-204ENST00000485901 LINC00959A0A1B0GUT2 108 aa7.83□□□□□ -1.16
HLA-DOA-204ENST00000485901 GAGE12HA6NDE8 117 aa7.83□□□□□ -1.16
HLA-DOA-204ENST00000485901 SS18Q15532 418 aa7.83□□□□□ -1.16
HLA-DOA-204ENST00000485901 CFAP161Q6P656 301 aa7.83□□□□□ -1.16
HLA-DOA-204ENST00000485901 Q8N8P6 123 aa7.83□□□□□ -1.16
HLA-DOA-204ENST00000485901 CHCHD10Q8WYQ3 142 aaPredicted RBP7.83□□□□□ -1.16
HLA-DOA-204ENST00000485901 CCL25O15444 150 aa7.82□□□□□ -1.16
HLA-DOA-204ENST00000485901 Q6ZSA8 131 aa7.82□□□□□ -1.16
HLA-DOA-204ENST00000485901 K7EMI3 77 aa7.81□□□□□ -1.16
HLA-DOA-204ENST00000485901 PRSS1P07477 247 aa7.81□□□□□ -1.16
HLA-DOA-204ENST00000485901 RPL39P62891 51 aaKnown RBP7.81□□□□□ -1.16
HLA-DOA-204ENST00000485901 KIAA1644Q3SXP7 199 aa7.81□□□□□ -1.16
HLA-DOA-204ENST00000485901 NXT2Q9NPJ8 142 aaKnown RBP7.81□□□□□ -1.16
HLA-DOA-204ENST00000485901 SPANXA1Q9NS26 97 aa7.81□□□□□ -1.16
HLA-DOA-204ENST00000485901 C1orf196B1AJZ1 125 aa7.8□□□□□ -1.16
HLA-DOA-204ENST00000485901 MT-ND6P03923 174 aa7.8□□□□□ -1.16
HLA-DOA-204ENST00000485901 XCL1P47992 114 aa7.8□□□□□ -1.16
HLA-DOA-204ENST00000485901 AP5S1Q9NUS5 200 aa7.8□□□□□ -1.16
HLA-DOA-204ENST00000485901 hDV102S1A0JD36 115 aa7.79□□□□□ -1.16
HLA-DOA-204ENST00000485901 G0S2P27469 103 aa7.79□□□□□ -1.16
HLA-DOA-204ENST00000485901 MRPS36P82909 103 aaKnown RBP7.79□□□□□ -1.16
HLA-DOA-204ENST00000485901 FABP9Q0Z7S8 132 aa7.79□□□□□ -1.16
HLA-DOA-204ENST00000485901 FOXI1Q12951 378 aa7.79□□□□□ -1.16
HLA-DOA-204ENST00000485901 ORMDL2Q53FV1 153 aa7.79□□□□□ -1.16
HLA-DOA-204ENST00000485901 CD164L2Q6UWJ8 174 aa7.79□□□□□ -1.16
HLA-DOA-204ENST00000485901 PYGO1Q9Y3Y4 419 aa7.79□□□□□ -1.16
HLA-DOA-204ENST00000485901 TRAV13-1A0A0B4J241 112 aa7.78□□□□□ -1.16
HLA-DOA-204ENST00000485901 OXTP01178 125 aa7.78□□□□□ -1.16
HLA-DOA-204ENST00000485901 IFI27P40305 119 aaPredicted RBP7.78□□□□□ -1.16
HLA-DOA-204ENST00000485901 Q6ZUT4 128 aa7.78□□□□□ -1.16
HLA-DOA-204ENST00000485901 PRSS3P2Q8NHM4 247 aa7.78□□□□□ -1.16
HLA-DOA-204ENST00000485901 ALKBH7Q9BT30 221 aaPredicted RBP7.78□□□□□ -1.16
HLA-DOA-204ENST00000485901 MRPL18Q9H0U6 180 aaKnown RBP7.78□□□□□ -1.16
HLA-DOA-204ENST00000485901 TGIF2-C20orf24A0A0A6YYL0 155 aa7.77□□□□□ -1.17
HLA-DOA-204ENST00000485901 LINC01620Q4KN68 170 aa7.77□□□□□ -1.17
HLA-DOA-204ENST00000485901 RNASE13Q5GAN3 156 aaKnown RBP7.77□□□□□ -1.17
HLA-DOA-204ENST00000485901 FAM30AQ9NZY2 134 aa7.77□□□□□ -1.17
HLA-DOA-204ENST00000485901 CYSLTR1Q9Y271 337 aa7.77□□□□□ -1.17
HLA-DOA-204ENST00000485901 TRAPPC1Q9Y5R8 145 aa7.77□□□□□ -1.17
HLA-DOA-204ENST00000485901 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.76□□□□□ -1.17
HLA-DOA-204ENST00000485901 IGHV1-58A0A0C4DH39 117 aa7.76□□□□□ -1.17
HLA-DOA-204ENST00000485901 CNBPP62633 177 aaKnown RBP7.76□□□□□ -1.17
HLA-DOA-204ENST00000485901 C2orf66Q6UXQ4 117 aa7.76□□□□□ -1.17
HLA-DOA-204ENST00000485901 SLC7A5P1Q8MH63 180 aa7.76□□□□□ -1.17
HLA-DOA-204ENST00000485901 C15orf56Q8N910 161 aa7.76□□□□□ -1.17
HLA-DOA-204ENST00000485901 C9orf163Q8N9P6 203 aa7.76□□□□□ -1.17
HLA-DOA-204ENST00000485901 OPRPNQ99935 248 aaPredicted RBP7.76□□□□□ -1.17
HLA-DOA-204ENST00000485901 LINC00528Q8N1L1 170 aa7.75□□□□□ -1.17
HLA-DOA-204ENST00000485901 FAM104AQ969W3 186 aa7.75□□□□□ -1.17
HLA-DOA-204ENST00000485901 GVQW2A0A096LPI5 108 aaPredicted RBP7.74□□□□□ -1.17
HLA-DOA-204ENST00000485901 COX7A2LO14548 114 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms