RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CBLN2Q8IUK8 224 aa7.85□□□□□ -1.15
HPS4-214ENST00000485842 FAT2Q9NYQ8 4349 aa7.84□□□□□ -1.15
HPS4-214ENST00000485842 PRSS47A8MTI9 375 aa7.84□□□□□ -1.15
HPS4-214ENST00000485842 RPL39P62891 51 aaKnown RBP7.84□□□□□ -1.15
HPS4-214ENST00000485842 SMAGPQ0VAQ4 97 aa7.84□□□□□ -1.15
HPS4-214ENST00000485842 Q8N8P6 123 aa7.84□□□□□ -1.15
HPS4-214ENST00000485842 UBE2D4Q9Y2X8 147 aa7.84□□□□□ -1.15
HPS4-214ENST00000485842 EPPK1P58107 5090 aaKnown RBP7.84□□□□□ -1.15
HPS4-214ENST00000485842 TRAV8-4A0A0B4J246 113 aa7.83□□□□□ -1.16
HPS4-214ENST00000485842 RNASE13Q5GAN3 156 aaKnown RBP7.83□□□□□ -1.16
HPS4-214ENST00000485842 Q6ZUT4 128 aa7.83□□□□□ -1.16
HPS4-214ENST00000485842 Q8N814 137 aa7.83□□□□□ -1.16
HPS4-214ENST00000485842 ALKBH7Q9BT30 221 aaPredicted RBP7.83□□□□□ -1.16
HPS4-214ENST00000485842 SMCO4Q9NRQ5 59 aa7.83□□□□□ -1.16
HPS4-214ENST00000485842 TRAPPC1Q9Y5R8 145 aa7.83□□□□□ -1.16
HPS4-214ENST00000485842 IFI27P40305 119 aaPredicted RBP7.82□□□□□ -1.16
HPS4-214ENST00000485842 KRTAP26-1Q6PEX3 210 aa7.82□□□□□ -1.16
HPS4-214ENST00000485842 ZNF664Q8N3J9 261 aa7.82□□□□□ -1.16
HPS4-214ENST00000485842 YPEL4Q96NS1 127 aa7.82□□□□□ -1.16
HPS4-214ENST00000485842 NXT2Q9NPJ8 142 aaKnown RBP7.82□□□□□ -1.16
HPS4-214ENST00000485842 CDC42SE2Q9NRR3 84 aa7.82□□□□□ -1.16
HPS4-214ENST00000485842 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.81□□□□□ -1.16
HPS4-214ENST00000485842 IGLV5-52A0A0A0MRZ9 124 aa7.81□□□□□ -1.16
HPS4-214ENST00000485842 GAGE12HA6NDE8 117 aa7.81□□□□□ -1.16
HPS4-214ENST00000485842 USP17L23D6RBM5 183 aa7.81□□□□□ -1.16
HPS4-214ENST00000485842 ORMDL2Q53FV1 153 aa7.81□□□□□ -1.16
HPS4-214ENST00000485842 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
HPS4-214ENST00000485842 PRSS3P2Q8NHM4 247 aa7.81□□□□□ -1.16
HPS4-214ENST00000485842 CHCHD10Q8WYQ3 142 aaPredicted RBP7.81□□□□□ -1.16
HPS4-214ENST00000485842 TIMM21Q9BVV7 248 aa7.81□□□□□ -1.16
HPS4-214ENST00000485842 SPANXA1Q9NS26 97 aa7.81□□□□□ -1.16
HPS4-214ENST00000485842 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
HPS4-214ENST00000485842 OPRPNQ99935 248 aaPredicted RBP7.8□□□□□ -1.16
HPS4-214ENST00000485842 CYSLTR1Q9Y271 337 aa7.8□□□□□ -1.16
HPS4-214ENST00000485842 CSDC2Q9Y534 153 aaKnown RBP7.8□□□□□ -1.16
HPS4-214ENST00000485842 PKD1P98161 4303 aa7.8□□□□□ -1.16
HPS4-214ENST00000485842 LINC00959A0A1B0GUT2 108 aa7.79□□□□□ -1.16
HPS4-214ENST00000485842 CCL25O15444 150 aa7.79□□□□□ -1.16
HPS4-214ENST00000485842 XCL1P47992 114 aa7.79□□□□□ -1.16
HPS4-214ENST00000485842 SS18Q15532 418 aa7.79□□□□□ -1.16
HPS4-214ENST00000485842 C2orf66Q6UXQ4 117 aa7.79□□□□□ -1.16
HPS4-214ENST00000485842 NTN5Q8WTR8 489 aaPredicted RBP7.79□□□□□ -1.16
HPS4-214ENST00000485842 TRAV13-1A0A0B4J241 112 aa7.78□□□□□ -1.16
HPS4-214ENST00000485842 K7EMI3 77 aa7.78□□□□□ -1.16
HPS4-214ENST00000485842 C14orf177Q52M58 125 aa7.78□□□□□ -1.16
HPS4-214ENST00000485842 FA2HQ7L5A8 372 aa7.78□□□□□ -1.16
HPS4-214ENST00000485842 MRPS36P82909 103 aaKnown RBP7.77□□□□□ -1.17
HPS4-214ENST00000485842 C18orf32Q8TCD1 76 aa7.77□□□□□ -1.17
HPS4-214ENST00000485842 BIRC6Q9NR09 4857 aa7.76□□□□□ -1.17
HPS4-214ENST00000485842 IGLV4-3A0A075B6K6 122 aa7.76□□□□□ -1.17
HPS4-214ENST00000485842 IFITM10A6NMD0 228 aa7.76□□□□□ -1.17
HPS4-214ENST00000485842 PRSS1P07477 247 aa7.76□□□□□ -1.17
HPS4-214ENST00000485842 GCSHP23434 173 aa7.76□□□□□ -1.17
HPS4-214ENST00000485842 FOXI1Q12951 378 aa7.76□□□□□ -1.17
HPS4-214ENST00000485842 FAM104AQ969W3 186 aa7.76□□□□□ -1.17
HPS4-214ENST00000485842 PYGO1Q9Y3Y4 419 aa7.76□□□□□ -1.17
HPS4-214ENST00000485842 PKHD1P08F94 4074 aa7.75□□□□□ -1.17
HPS4-214ENST00000485842 hDV102S1A0JD36 115 aa7.75□□□□□ -1.17
HPS4-214ENST00000485842 C1orf196B1AJZ1 125 aa7.75□□□□□ -1.17
HPS4-214ENST00000485842 SCO1O75880 301 aa7.75□□□□□ -1.17
HPS4-214ENST00000485842 G0S2P27469 103 aa7.75□□□□□ -1.17
HPS4-214ENST00000485842 KRTAP10-1P60331 282 aa7.75□□□□□ -1.17
HPS4-214ENST00000485842 TMEM141Q96I45 108 aa7.75□□□□□ -1.17
HPS4-214ENST00000485842 DNAH11Q96DT5 4516 aa7.75□□□□□ -1.17
HPS4-214ENST00000485842 LINC01546A6NGU7 62 aa7.74□□□□□ -1.17
HPS4-214ENST00000485842 LINC01620Q4KN68 170 aa7.74□□□□□ -1.17
HPS4-214ENST00000485842 HIGD2BQ4VC39 106 aa7.74□□□□□ -1.17
HPS4-214ENST00000485842 CD164L2Q6UWJ8 174 aa7.74□□□□□ -1.17
HPS4-214ENST00000485842 Q6ZN92 141 aa7.74□□□□□ -1.17
HPS4-214ENST00000485842 C15orf56Q8N910 161 aa7.74□□□□□ -1.17
HPS4-214ENST00000485842 TOMM6Q96B49 74 aa7.74□□□□□ -1.17
HPS4-214ENST00000485842 AP5S1Q9NUS5 200 aa7.74□□□□□ -1.17
HPS4-214ENST00000485842 ZC2HC1BQ5TFG8 222 aa7.73□□□□□ -1.17
HPS4-214ENST00000485842 CFAP161Q6P656 301 aa7.73□□□□□ -1.17
HPS4-214ENST00000485842 TEX43Q6ZNM6 134 aa7.73□□□□□ -1.17
HPS4-214ENST00000485842 SCGB3A1Q96QR1 104 aa7.73□□□□□ -1.17
HPS4-214ENST00000485842 IGIPA6NJ69 53 aa7.72□□□□□ -1.17
HPS4-214ENST00000485842 COLCA2A8K830 154 aa7.72□□□□□ -1.17
HPS4-214ENST00000485842 COX7A2LO14548 114 aa7.72□□□□□ -1.17
HPS4-214ENST00000485842 TRGC2P03986 189 aa7.72□□□□□ -1.17
HPS4-214ENST00000485842 MALP21145 153 aa7.72□□□□□ -1.17
HPS4-214ENST00000485842 C5orf38Q86SI9 138 aa7.72□□□□□ -1.17
HPS4-214ENST00000485842 URB1-AS1Q96HZ7 61 aa7.72□□□□□ -1.17
HPS4-214ENST00000485842 TIMM17AQ99595 171 aa7.72□□□□□ -1.17
HPS4-214ENST00000485842 C2orf88Q9BSF0 95 aa7.72□□□□□ -1.17
HPS4-214ENST00000485842 IGHV1-58A0A0C4DH39 117 aa7.71□□□□□ -1.18
HPS4-214ENST00000485842 LINC00614P0C842 121 aa7.71□□□□□ -1.18
HPS4-214ENST00000485842 RAB5BP61020 215 aa7.71□□□□□ -1.18
HPS4-214ENST00000485842 PMCHL1Q16048 86 aa7.71□□□□□ -1.18
HPS4-214ENST00000485842 LINC00173Q6ZV60 143 aa7.71□□□□□ -1.18
HPS4-214ENST00000485842 VCX2Q9H322 139 aa7.71□□□□□ -1.18
HPS4-214ENST00000485842 GVQW2A0A096LPI5 108 aaPredicted RBP7.7□□□□□ -1.18
HPS4-214ENST00000485842 NPSP0C0P6 89 aa7.7□□□□□ -1.18
HPS4-214ENST00000485842 PAPPA-AS1Q5QFB9 102 aa7.7□□□□□ -1.18
HPS4-214ENST00000485842 ERASQ7Z444 233 aa7.7□□□□□ -1.18
HPS4-214ENST00000485842 AMELXQ99217 191 aa7.7□□□□□ -1.18
HPS4-214ENST00000485842 A0A096LNJ9 63 aa7.69□□□□□ -1.18
HPS4-214ENST00000485842 LINC01549A6NIU2 74 aa7.69□□□□□ -1.18
HPS4-214ENST00000485842 CDK2AP2O75956 126 aa7.69□□□□□ -1.18
HPS4-214ENST00000485842 HBDP02042 147 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms