RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 DNAH2Q9P225 4427 aa13.3□□□□□ -0.28
COL6A2-208ENST00000485591 FRAS1Q86XX4 4008 aa13.29□□□□□ -0.28
COL6A2-208ENST00000485591 FA2HQ7L5A8 372 aa13.29□□□□□ -0.28
COL6A2-208ENST00000485591 C1orf43Q9BWL3 253 aa13.29□□□□□ -0.28
COL6A2-208ENST00000485591 CYSLTR1Q9Y271 337 aa13.29□□□□□ -0.28
COL6A2-208ENST00000485591 IGKV2D-24A0A075B6R9 120 aa13.28□□□□□ -0.28
COL6A2-208ENST00000485591 PSCAO43653 123 aa13.28□□□□□ -0.28
COL6A2-208ENST00000485591 G0S2P27469 103 aa13.28□□□□□ -0.28
COL6A2-208ENST00000485591 TNP2Q05952 138 aa13.28□□□□□ -0.28
COL6A2-208ENST00000485591 C2orf66Q6UXQ4 117 aa13.28□□□□□ -0.28
COL6A2-208ENST00000485591 ZNF664Q8N3J9 261 aa13.28□□□□□ -0.28
COL6A2-208ENST00000485591 TRAV8-4A0A0B4J246 113 aa13.27□□□□□ -0.29
COL6A2-208ENST00000485591 URB1-AS1Q96HZ7 61 aa13.27□□□□□ -0.29
COL6A2-208ENST00000485591 PYGO1Q9Y3Y4 419 aa13.27□□□□□ -0.29
COL6A2-208ENST00000485591 MRPS36P82909 103 aaKnown RBP13.26□□□□□ -0.29
COL6A2-208ENST00000485591 Q6ZUT4 128 aa13.26□□□□□ -0.29
COL6A2-208ENST00000485591 AP5S1Q9NUS5 200 aa13.26□□□□□ -0.29
COL6A2-208ENST00000485591 DNAH10Q8IVF4 4471 aa13.25□□□□□ -0.29
COL6A2-208ENST00000485591 LINC00614P0C842 121 aa13.25□□□□□ -0.29
COL6A2-208ENST00000485591 RAB5BP61020 215 aa13.25□□□□□ -0.29
COL6A2-208ENST00000485591 IGKV3OR2-268A0A0C4DH90 116 aa13.24□□□□□ -0.29
COL6A2-208ENST00000485591 FAM104AQ969W3 186 aa13.24□□□□□ -0.29
COL6A2-208ENST00000485591 TOMM6Q96B49 74 aa13.24□□□□□ -0.29
COL6A2-208ENST00000485591 IGLV10-54A0A075B6I4 117 aa13.23□□□□□ -0.29
COL6A2-208ENST00000485591 LINC01549A6NIU2 74 aa13.23□□□□□ -0.29
COL6A2-208ENST00000485591 KRTAP26-1Q6PEX3 210 aa13.23□□□□□ -0.29
COL6A2-208ENST00000485591 NPSP0C0P6 89 aa13.22□□□□□ -0.29
COL6A2-208ENST00000485591 RNASE13Q5GAN3 156 aaKnown RBP13.22□□□□□ -0.29
COL6A2-208ENST00000485591 MAPKAPK5-AS1Q8N8E1 139 aa13.22□□□□□ -0.29
COL6A2-208ENST00000485591 DNAH17Q9UFH2 4485 aa13.22□□□□□ -0.29
COL6A2-208ENST00000485591 IGLV4-3A0A075B6K6 122 aa13.21□□□□□ -0.29
COL6A2-208ENST00000485591 A0A087WTM6 91 aa13.21□□□□□ -0.29
COL6A2-208ENST00000485591 LINC00959A0A1B0GUT2 108 aa13.21□□□□□ -0.29
COL6A2-208ENST00000485591 LRCOL1A6NCL2 159 aa13.21□□□□□ -0.29
COL6A2-208ENST00000485591 IGIPA6NJ69 53 aa13.21□□□□□ -0.29
COL6A2-208ENST00000485591 CHCHD1Q96BP2 118 aaKnown RBP13.21□□□□□ -0.29
COL6A2-208ENST00000485591 OPRPNQ99935 248 aaPredicted RBP13.21□□□□□ -0.29
COL6A2-208ENST00000485591 A0A1B0GVY2 172 aa13.2□□□□□ -0.3
COL6A2-208ENST00000485591 TMEM141Q96I45 108 aa13.2□□□□□ -0.3
COL6A2-208ENST00000485591 TIMM17AQ99595 171 aa13.2□□□□□ -0.3
COL6A2-208ENST00000485591 A0A096LNJ9 63 aa13.19□□□□□ -0.3
COL6A2-208ENST00000485591 SS18Q15532 418 aa13.19□□□□□ -0.3
COL6A2-208ENST00000485591 BAGE3Q86Y29 109 aa13.19□□□□□ -0.3
COL6A2-208ENST00000485591 CHCHD10Q8WYQ3 142 aaPredicted RBP13.19□□□□□ -0.3
COL6A2-208ENST00000485591 FAT2Q9NYQ8 4349 aa13.19□□□□□ -0.3
COL6A2-208ENST00000485591 CCL25O15444 150 aa13.18□□□□□ -0.3
COL6A2-208ENST00000485591 ERASQ7Z444 233 aa13.18□□□□□ -0.3
COL6A2-208ENST00000485591 EREGO14944 169 aa13.17□□□□□ -0.3
COL6A2-208ENST00000485591 HBDP02042 147 aa13.17□□□□□ -0.3
COL6A2-208ENST00000485591 Q6ZN92 141 aa13.17□□□□□ -0.3
COL6A2-208ENST00000485591 BAALCQ8WXS3 180 aa13.17□□□□□ -0.3
COL6A2-208ENST00000485591 SCGB3A1Q96QR1 104 aa13.17□□□□□ -0.3
COL6A2-208ENST00000485591 TRAV13-1A0A0B4J241 112 aa13.16□□□□□ -0.3
COL6A2-208ENST00000485591 GAGE12HA6NDE8 117 aa13.16□□□□□ -0.3
COL6A2-208ENST00000485591 IFITM10A6NMD0 228 aa13.16□□□□□ -0.3
COL6A2-208ENST00000485591 C1orf196B1AJZ1 125 aa13.16□□□□□ -0.3
COL6A2-208ENST00000485591 WFDC2Q14508 124 aa13.16□□□□□ -0.3
COL6A2-208ENST00000485591 PMCHL1Q16048 86 aa13.16□□□□□ -0.3
COL6A2-208ENST00000485591 PAPPA-AS1Q5QFB9 102 aa13.16□□□□□ -0.3
COL6A2-208ENST00000485591 TEX43Q6ZNM6 134 aa13.16□□□□□ -0.3
COL6A2-208ENST00000485591 LINC00173Q6ZV60 143 aa13.15□□□□□ -0.3
COL6A2-208ENST00000485591 AMELXQ99217 191 aa13.15□□□□□ -0.3
COL6A2-208ENST00000485591 HIST1H2BKO60814 126 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 HIST1H2BJP06899 126 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 HIST1H2BOP23527 126 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 HIST1H2BBP33778 126 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 XCL1P47992 114 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 HIST1H2BDP58876 126 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 LINC00310P59036 64 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 HIST1H2BCP62807 126 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 HIST2H2BEQ16778 126 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.14□□□□□ -0.31
COL6A2-208ENST00000485591 HIST1H2BHQ93079 126 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 HIST1H2BNQ99877 126 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 HIST1H2BMQ99879 126 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 VCX2Q9H322 139 aa13.14□□□□□ -0.31
COL6A2-208ENST00000485591 LECT2O14960 151 aa13.13□□□□□ -0.31
COL6A2-208ENST00000485591 HSBP1O75506 76 aa13.13□□□□□ -0.31
COL6A2-208ENST00000485591 SERF1AO75920 110 aa13.13□□□□□ -0.31
COL6A2-208ENST00000485591 FOXI1Q12951 378 aa13.13□□□□□ -0.31
COL6A2-208ENST00000485591 PDZD11Q5EBL8 140 aa13.13□□□□□ -0.31
COL6A2-208ENST00000485591 CD164L2Q6UWJ8 174 aa13.13□□□□□ -0.31
COL6A2-208ENST00000485591 Q8N814 137 aa13.13□□□□□ -0.31
COL6A2-208ENST00000485591 C2orf88Q9BSF0 95 aa13.13□□□□□ -0.31
COL6A2-208ENST00000485591 USP17L23D6RBM5 183 aa13.11□□□□□ -0.31
COL6A2-208ENST00000485591 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.11□□□□□ -0.31
COL6A2-208ENST00000485591 ZC2HC1BQ5TFG8 222 aa13.11□□□□□ -0.31
COL6A2-208ENST00000485591 UBE2D1P51668 147 aa13.1□□□□□ -0.31
COL6A2-208ENST00000485591 C14orf177Q52M58 125 aa13.1□□□□□ -0.31
COL6A2-208ENST00000485591 SPATA12Q7Z6I5 190 aa13.1□□□□□ -0.31
COL6A2-208ENST00000485591 ATP5LO75964 103 aa13.09□□□□□ -0.31
COL6A2-208ENST00000485591 KRTAP10-2P60368 255 aa13.08□□□□□ -0.32
COL6A2-208ENST00000485591 LINC00242Q5T6M2 205 aa13.08□□□□□ -0.32
COL6A2-208ENST00000485591 FAM19A3Q7Z5A8 133 aa13.08□□□□□ -0.32
COL6A2-208ENST00000485591 FAM19A2Q8N3H0 131 aa13.08□□□□□ -0.32
COL6A2-208ENST00000485591 NUPR1O60356 82 aa13.07□□□□□ -0.32
COL6A2-208ENST00000485591 CDPF1Q6NVV7 123 aa13.07□□□□□ -0.32
COL6A2-208ENST00000485591 NTN5Q8WTR8 489 aaPredicted RBP13.07□□□□□ -0.32
COL6A2-208ENST00000485591 PKD1P98161 4303 aa13.07□□□□□ -0.32
COL6A2-208ENST00000485591 IGHV3OR16-9A0A0B4J2B5 98 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms