RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 KRTAP26-1Q6PEX3 210 aa8.36□□□□□ -1.07
HDAC6-227ENST00000485102 SDIM1Q6ZPB5 146 aa8.36□□□□□ -1.07
HDAC6-227ENST00000485102 ORMDL3Q8N138 153 aa8.36□□□□□ -1.07
HDAC6-227ENST00000485102 C20orf78Q9BR46 151 aa8.36□□□□□ -1.07
HDAC6-227ENST00000485102 CIRBPQ14011 172 aaKnown RBP8.35□□□□□ -1.07
HDAC6-227ENST00000485102 AMN1Q8IY45 258 aa8.35□□□□□ -1.07
HDAC6-227ENST00000485102 NEXN-AS1Q8NBZ9 246 aa8.35□□□□□ -1.07
HDAC6-227ENST00000485102 ST20Q9HBF5 79 aa8.35□□□□□ -1.07
HDAC6-227ENST00000485102 ANGP03950 147 aaKnown RBP8.34□□□□□ -1.07
HDAC6-227ENST00000485102 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
HDAC6-227ENST00000485102 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-227ENST00000485102 K7EMI3 77 aa8.33□□□□□ -1.08
HDAC6-227ENST00000485102 VCYO14598 125 aa8.33□□□□□ -1.08
HDAC6-227ENST00000485102 APCSP02743 223 aa8.33□□□□□ -1.08
HDAC6-227ENST00000485102 G0S2P27469 103 aa8.33□□□□□ -1.08
HDAC6-227ENST00000485102 CNBPP62633 177 aaKnown RBP8.33□□□□□ -1.08
HDAC6-227ENST00000485102 COTL1Q14019 142 aa8.33□□□□□ -1.08
HDAC6-227ENST00000485102 TMEM136Q6ZRR5 245 aa8.33□□□□□ -1.08
HDAC6-227ENST00000485102 KIR2DL4Q99706 377 aa8.33□□□□□ -1.08
HDAC6-227ENST00000485102 TNXBP22105 4242 aa8.33□□□□□ -1.08
HDAC6-227ENST00000485102 LRP2P98164 4655 aa8.32□□□□□ -1.08
HDAC6-227ENST00000485102 TRBV25-1A0A075B6N4 114 aa8.32□□□□□ -1.08
HDAC6-227ENST00000485102 PANO1I0J062 215 aa8.32□□□□□ -1.08
HDAC6-227ENST00000485102 I3L3M4 83 aa8.32□□□□□ -1.08
HDAC6-227ENST00000485102 MRPL51Q4U2R6 128 aaKnown RBP8.32□□□□□ -1.08
HDAC6-227ENST00000485102 NTM-AS1Q6ZSK4 140 aa8.32□□□□□ -1.08
HDAC6-227ENST00000485102 RNF185Q96GF1 192 aa8.32□□□□□ -1.08
HDAC6-227ENST00000485102 CHCHD5Q9BSY4 110 aa8.32□□□□□ -1.08
HDAC6-227ENST00000485102 IGHV1-24A0A0C4DH33 117 aa8.31□□□□□ -1.08
HDAC6-227ENST00000485102 SDHAF1A6NFY7 115 aa8.31□□□□□ -1.08
HDAC6-227ENST00000485102 H7C423 109 aa8.31□□□□□ -1.08
HDAC6-227ENST00000485102 PMCHP20382 165 aa8.31□□□□□ -1.08
HDAC6-227ENST00000485102 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
HDAC6-227ENST00000485102 RBX1P62877 108 aa8.31□□□□□ -1.08
HDAC6-227ENST00000485102 TMEM18Q96B42 140 aa8.31□□□□□ -1.08
HDAC6-227ENST00000485102 TRBV27A0A0K0K1C4 114 aa8.3□□□□□ -1.08
HDAC6-227ENST00000485102 LINC01549A6NIU2 74 aa8.3□□□□□ -1.08
HDAC6-227ENST00000485102 D6R8Y8 96 aa8.3□□□□□ -1.08
HDAC6-227ENST00000485102 IQCJQ1A5X6 159 aa8.3□□□□□ -1.08
HDAC6-227ENST00000485102 PRELID3AQ96N28 172 aa8.3□□□□□ -1.08
HDAC6-227ENST00000485102 MAP1LC3AQ9H492 121 aa8.3□□□□□ -1.08
HDAC6-227ENST00000485102 TRAPPC1Q9Y5R8 145 aa8.3□□□□□ -1.08
HDAC6-227ENST00000485102 TRAV26-2A0A0B4J265 109 aa8.29□□□□□ -1.08
HDAC6-227ENST00000485102 PRSS47A8MTI9 375 aa8.29□□□□□ -1.08
HDAC6-227ENST00000485102 UBE2L6O14933 153 aa8.29□□□□□ -1.08
HDAC6-227ENST00000485102 TNFRSF6BO95407 300 aa8.29□□□□□ -1.08
HDAC6-227ENST00000485102 RAB5AP20339 215 aa8.29□□□□□ -1.08
HDAC6-227ENST00000485102 FCER1GP30273 86 aa8.29□□□□□ -1.08
HDAC6-227ENST00000485102 LINC00269Q8N2A0 174 aa8.29□□□□□ -1.08
HDAC6-227ENST00000485102 NXT2Q9NPJ8 142 aaKnown RBP8.29□□□□□ -1.08
HDAC6-227ENST00000485102 TRAV8-4A0A0B4J246 113 aa8.28□□□□□ -1.08
HDAC6-227ENST00000485102 POLR2KP53803 58 aaKnown RBP8.28□□□□□ -1.08
HDAC6-227ENST00000485102 FABP9Q0Z7S8 132 aa8.28□□□□□ -1.08
HDAC6-227ENST00000485102 MRPL18Q9H0U6 180 aaKnown RBP8.28□□□□□ -1.08
HDAC6-227ENST00000485102 A0A1B0GUV1 79 aa8.27□□□□□ -1.09
HDAC6-227ENST00000485102 AMTP48728 403 aa8.27□□□□□ -1.09
HDAC6-227ENST00000485102 REG3AQ06141 175 aa8.27□□□□□ -1.09
HDAC6-227ENST00000485102 NRACQ8N912 160 aa8.27□□□□□ -1.09
HDAC6-227ENST00000485102 TMEM243Q9BU79 118 aa8.27□□□□□ -1.09
HDAC6-227ENST00000485102 IGHV3-64A0A075B6Q5 118 aa8.26□□□□□ -1.09
HDAC6-227ENST00000485102 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-227ENST00000485102 TGIF2-C20orf24A0A0A6YYL0 155 aa8.26□□□□□ -1.09
HDAC6-227ENST00000485102 ZNF25P17030 456 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-227ENST00000485102 RAB5BP61020 215 aa8.26□□□□□ -1.09
HDAC6-227ENST00000485102 GAGE6Q13070 117 aa8.26□□□□□ -1.09
HDAC6-227ENST00000485102 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
HDAC6-227ENST00000485102 RPL39LQ96EH5 51 aaKnown RBP8.26□□□□□ -1.09
HDAC6-227ENST00000485102 SMIM2Q9BVW6 85 aa8.26□□□□□ -1.09
HDAC6-227ENST00000485102 PLAC8Q9NZF1 115 aa8.26□□□□□ -1.09
HDAC6-227ENST00000485102 A0A087WYN8 130 aa8.25□□□□□ -1.09
HDAC6-227ENST00000485102 SLPIP03973 132 aa8.25□□□□□ -1.09
HDAC6-227ENST00000485102 CLPSL2Q6UWE3 100 aa8.25□□□□□ -1.09
HDAC6-227ENST00000485102 C20orf203Q8NBC4 194 aa8.25□□□□□ -1.09
HDAC6-227ENST00000485102 SPACA4Q8TDM5 124 aa8.25□□□□□ -1.09
HDAC6-227ENST00000485102 TMEM101Q96IK0 257 aa8.25□□□□□ -1.09
HDAC6-227ENST00000485102 hDV102S1A0JD36 115 aa8.24□□□□□ -1.09
HDAC6-227ENST00000485102 ATP6V1G1O75348 118 aa8.24□□□□□ -1.09
HDAC6-227ENST00000485102 RPS10P46783 165 aaKnown RBP8.24□□□□□ -1.09
HDAC6-227ENST00000485102 CBLN2Q8IUK8 224 aa8.24□□□□□ -1.09
HDAC6-227ENST00000485102 Q8N8P6 123 aa8.24□□□□□ -1.09
HDAC6-227ENST00000485102 YPEL4Q96NS1 127 aa8.24□□□□□ -1.09
HDAC6-227ENST00000485102 AP5S1Q9NUS5 200 aa8.24□□□□□ -1.09
HDAC6-227ENST00000485102 RNF213Q63HN8 5207 aa8.24□□□□□ -1.09
HDAC6-227ENST00000485102 SMKR1H3BMG3 65 aa8.23□□□□□ -1.09
HDAC6-227ENST00000485102 NPYP01303 97 aa8.23□□□□□ -1.09
HDAC6-227ENST00000485102 AMMECR1LQ6DCA0 310 aa8.23□□□□□ -1.09
HDAC6-227ENST00000485102 PRSS3P2Q8NHM4 247 aa8.23□□□□□ -1.09
HDAC6-227ENST00000485102 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
HDAC6-227ENST00000485102 IGLV10-54A0A075B6I4 117 aa8.22□□□□□ -1.09
HDAC6-227ENST00000485102 NPSP0C0P6 89 aa8.22□□□□□ -1.09
HDAC6-227ENST00000485102 DPH3Q96FX2 82 aa8.22□□□□□ -1.09
HDAC6-227ENST00000485102 ALKBH7Q9BT30 221 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-227ENST00000485102 CSDC2Q9Y534 153 aaKnown RBP8.22□□□□□ -1.09
HDAC6-227ENST00000485102 IGLV4-60A0A075B6I1 120 aa8.21□□□□□ -1.1
HDAC6-227ENST00000485102 PAPPA-AS1Q5QFB9 102 aa8.21□□□□□ -1.1
HDAC6-227ENST00000485102 FA2HQ7L5A8 372 aa8.21□□□□□ -1.1
HDAC6-227ENST00000485102 TIMM21Q9BVV7 248 aa8.21□□□□□ -1.1
HDAC6-227ENST00000485102 COLCA2A8K830 154 aa8.2□□□□□ -1.1
HDAC6-227ENST00000485102 CCL25O15444 150 aa8.2□□□□□ -1.1
HDAC6-227ENST00000485102 TSHBP01222 138 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms