RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 Q8N8P6 123 aa11.95□□□□□ -0.5
CNKSR1-208ENST00000484874 OR5A1Q8NGJ0 315 aa11.95□□□□□ -0.5
CNKSR1-208ENST00000484874 NTN5Q8WTR8 489 aaPredicted RBP11.95□□□□□ -0.5
CNKSR1-208ENST00000484874 K7EMI3 77 aa11.94□□□□□ -0.5
CNKSR1-208ENST00000484874 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
CNKSR1-208ENST00000484874 UBE2D4Q9Y2X8 147 aa11.94□□□□□ -0.5
CNKSR1-208ENST00000484874 BIRC6Q9NR09 4857 aa11.94□□□□□ -0.5
CNKSR1-208ENST00000484874 WFDC2Q14508 124 aa11.93□□□□□ -0.5
CNKSR1-208ENST00000484874 KIAA1644Q3SXP7 199 aa11.93□□□□□ -0.5
CNKSR1-208ENST00000484874 DGAT2L7PQ6IED9 249 aa11.93□□□□□ -0.5
CNKSR1-208ENST00000484874 LOC389332A0A1B0GUA5 103 aa11.92□□□□□ -0.5
CNKSR1-208ENST00000484874 NXT2Q9NPJ8 142 aaKnown RBP11.92□□□□□ -0.5
CNKSR1-208ENST00000484874 TGIF2-C20orf24A0A0A6YYL0 155 aa11.91□□□□□ -0.5
CNKSR1-208ENST00000484874 C14orf177Q52M58 125 aa11.91□□□□□ -0.5
CNKSR1-208ENST00000484874 ALKBH7Q9BT30 221 aaPredicted RBP11.91□□□□□ -0.5
CNKSR1-208ENST00000484874 MRPL18Q9H0U6 180 aaKnown RBP11.91□□□□□ -0.5
CNKSR1-208ENST00000484874 IGLV10-54A0A075B6I4 117 aa11.9□□□□□ -0.5
CNKSR1-208ENST00000484874 LECT2O14960 151 aa11.9□□□□□ -0.5
CNKSR1-208ENST00000484874 CCL25O15444 150 aa11.9□□□□□ -0.5
CNKSR1-208ENST00000484874 FABP9Q0Z7S8 132 aa11.9□□□□□ -0.5
CNKSR1-208ENST00000484874 YPEL4Q96NS1 127 aa11.9□□□□□ -0.5
CNKSR1-208ENST00000484874 SPANXA1Q9NS26 97 aa11.9□□□□□ -0.5
CNKSR1-208ENST00000484874 LINC00959A0A1B0GUT2 108 aa11.89□□□□□ -0.51
CNKSR1-208ENST00000484874 RPL39P62891 51 aaKnown RBP11.89□□□□□ -0.51
CNKSR1-208ENST00000484874 PYGO1Q9Y3Y4 419 aa11.89□□□□□ -0.51
CNKSR1-208ENST00000484874 G0S2P27469 103 aa11.88□□□□□ -0.51
CNKSR1-208ENST00000484874 IFI27P40305 119 aaPredicted RBP11.88□□□□□ -0.51
CNKSR1-208ENST00000484874 MRPS36P82909 103 aaKnown RBP11.88□□□□□ -0.51
CNKSR1-208ENST00000484874 ORMDL2Q53FV1 153 aa11.88□□□□□ -0.51
CNKSR1-208ENST00000484874 SMCO4Q9NRQ5 59 aa11.88□□□□□ -0.51
CNKSR1-208ENST00000484874 TRAPPC1Q9Y5R8 145 aa11.88□□□□□ -0.51
CNKSR1-208ENST00000484874 DYNC1H1Q14204 4646 aaKnown RBP11.88□□□□□ -0.51
CNKSR1-208ENST00000484874 IGLV5-52A0A0A0MRZ9 124 aa11.87□□□□□ -0.51
CNKSR1-208ENST00000484874 IGKV3OR2-268A0A0C4DH90 116 aa11.87□□□□□ -0.51
CNKSR1-208ENST00000484874 SS18Q15532 418 aa11.87□□□□□ -0.51
CNKSR1-208ENST00000484874 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
CNKSR1-208ENST00000484874 USP17L23D6RBM5 183 aa11.86□□□□□ -0.51
CNKSR1-208ENST00000484874 GCSHP23434 173 aa11.86□□□□□ -0.51
CNKSR1-208ENST00000484874 FUSP35637 526 aaKnown RBP eCLIP11.86□□□□□ -0.51
CNKSR1-208ENST00000484874 FAM104AQ969W3 186 aa11.86□□□□□ -0.51
CNKSR1-208ENST00000484874 GAGE12HA6NDE8 117 aa11.85□□□□□ -0.51
CNKSR1-208ENST00000484874 LINC01546A6NGU7 62 aa11.85□□□□□ -0.51
CNKSR1-208ENST00000484874 C1orf196B1AJZ1 125 aa11.85□□□□□ -0.51
CNKSR1-208ENST00000484874 PRSS3P2Q8NHM4 247 aa11.85□□□□□ -0.51
CNKSR1-208ENST00000484874 NPSP0C0P6 89 aa11.84□□□□□ -0.51
CNKSR1-208ENST00000484874 CFAP161Q6P656 301 aa11.84□□□□□ -0.51
CNKSR1-208ENST00000484874 CYSLTR1Q9Y271 337 aa11.84□□□□□ -0.51
CNKSR1-208ENST00000484874 CDK2AP2O75956 126 aa11.83□□□□□ -0.52
CNKSR1-208ENST00000484874 FOXI1Q12951 378 aa11.83□□□□□ -0.52
CNKSR1-208ENST00000484874 CD164L2Q6UWJ8 174 aa11.83□□□□□ -0.52
CNKSR1-208ENST00000484874 C2orf66Q6UXQ4 117 aa11.83□□□□□ -0.52
CNKSR1-208ENST00000484874 Q6ZUT4 128 aa11.83□□□□□ -0.52
CNKSR1-208ENST00000484874 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.82□□□□□ -0.52
CNKSR1-208ENST00000484874 PRSS1P07477 247 aa11.82□□□□□ -0.52
CNKSR1-208ENST00000484874 LINC01549A6NIU2 74 aa11.81□□□□□ -0.52
CNKSR1-208ENST00000484874 KRTAP10-1P60331 282 aa11.81□□□□□ -0.52
CNKSR1-208ENST00000484874 CBLN2Q8IUK8 224 aa11.81□□□□□ -0.52
CNKSR1-208ENST00000484874 OPRPNQ99935 248 aaPredicted RBP11.81□□□□□ -0.52
CNKSR1-208ENST00000484874 LRP1BQ9NZR2 4599 aa11.81□□□□□ -0.52
CNKSR1-208ENST00000484874 DNAH5Q8TE73 4624 aa11.8□□□□□ -0.52
CNKSR1-208ENST00000484874 IGIPA6NJ69 53 aa11.8□□□□□ -0.52
CNKSR1-208ENST00000484874 XCL1P47992 114 aa11.8□□□□□ -0.52
CNKSR1-208ENST00000484874 RNASE13Q5GAN3 156 aaKnown RBP11.8□□□□□ -0.52
CNKSR1-208ENST00000484874 IGLV4-3A0A075B6K6 122 aa11.79□□□□□ -0.52
CNKSR1-208ENST00000484874 TRAV13-1A0A0B4J241 112 aa11.79□□□□□ -0.52
CNKSR1-208ENST00000484874 TOMM6Q96B49 74 aa11.79□□□□□ -0.52
CNKSR1-208ENST00000484874 TMEM141Q96I45 108 aa11.79□□□□□ -0.52
CNKSR1-208ENST00000484874 C18orf32Q8TCD1 76 aa11.78□□□□□ -0.52
CNKSR1-208ENST00000484874 CNBPP62633 177 aaKnown RBP11.77□□□□□ -0.53
CNKSR1-208ENST00000484874 FA2HQ7L5A8 372 aa11.77□□□□□ -0.53
CNKSR1-208ENST00000484874 C15orf56Q8N910 161 aa11.77□□□□□ -0.53
CNKSR1-208ENST00000484874 hDV102S1A0JD36 115 aa11.76□□□□□ -0.53
CNKSR1-208ENST00000484874 LINC00614P0C842 121 aa11.76□□□□□ -0.53
CNKSR1-208ENST00000484874 PAPPA-AS1Q5QFB9 102 aa11.76□□□□□ -0.53
CNKSR1-208ENST00000484874 ERASQ7Z444 233 aa11.76□□□□□ -0.53
CNKSR1-208ENST00000484874 C9orf163Q8N9P6 203 aa11.76□□□□□ -0.53
CNKSR1-208ENST00000484874 AMELXQ99217 191 aa11.76□□□□□ -0.53
CNKSR1-208ENST00000484874 TIMM17AQ99595 171 aa11.76□□□□□ -0.53
CNKSR1-208ENST00000484874 AP5S1Q9NUS5 200 aa11.76□□□□□ -0.53
CNKSR1-208ENST00000484874 GVQW2A0A096LPI5 108 aaPredicted RBP11.75□□□□□ -0.53
CNKSR1-208ENST00000484874 IGHV1-58A0A0C4DH39 117 aa11.75□□□□□ -0.53
CNKSR1-208ENST00000484874 IFITM10A6NMD0 228 aa11.75□□□□□ -0.53
CNKSR1-208ENST00000484874 RAB5BP61020 215 aa11.75□□□□□ -0.53
CNKSR1-208ENST00000484874 Q6ZN92 141 aa11.75□□□□□ -0.53
CNKSR1-208ENST00000484874 TEX43Q6ZNM6 134 aa11.75□□□□□ -0.53
CNKSR1-208ENST00000484874 VCX2Q9H322 139 aa11.75□□□□□ -0.53
CNKSR1-208ENST00000484874 COX7A2LO14548 114 aa11.74□□□□□ -0.53
CNKSR1-208ENST00000484874 IGHV3OR16-9A0A0B4J2B5 98 aa11.73□□□□□ -0.53
CNKSR1-208ENST00000484874 COLCA2A8K830 154 aa11.73□□□□□ -0.53
CNKSR1-208ENST00000484874 SLPIP03973 132 aa11.73□□□□□ -0.53
CNKSR1-208ENST00000484874 XGP55808 180 aa11.73□□□□□ -0.53
CNKSR1-208ENST00000484874 URB1-AS1Q96HZ7 61 aa11.73□□□□□ -0.53
CNKSR1-208ENST00000484874 SCGB3A1Q96QR1 104 aa11.73□□□□□ -0.53
CNKSR1-208ENST00000484874 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.72□□□□□ -0.53
CNKSR1-208ENST00000484874 Q6ZSA8 131 aa11.72□□□□□ -0.53
CNKSR1-208ENST00000484874 LINC00173Q6ZV60 143 aa11.72□□□□□ -0.53
CNKSR1-208ENST00000484874 C2orf88Q9BSF0 95 aa11.72□□□□□ -0.53
CNKSR1-208ENST00000484874 KIAA1109Q2LD37 5005 aa11.71□□□□□ -0.53
CNKSR1-208ENST00000484874 MALP21145 153 aa11.71□□□□□ -0.53
CNKSR1-208ENST00000484874 UBE2D1P51668 147 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms