RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 DEFB112Q30KQ8 113 aa14.22□□□□□ -0.13
RPUSD3-216ENST00000484134 BEAN1Q3B7T3 259 aa14.22□□□□□ -0.13
RPUSD3-216ENST00000484134 LY6DQ14210 128 aa14.21□□□□□ -0.13
RPUSD3-216ENST00000484134 C11orf72Q8NBR9 251 aa14.21□□□□□ -0.13
RPUSD3-216ENST00000484134 UCNP55089 124 aa14.2□□□□□ -0.14
RPUSD3-216ENST00000484134 DAZ2Q13117 558 aaKnown RBP14.2□□□□□ -0.14
RPUSD3-216ENST00000484134 DAZ4Q86SG3 579 aaKnown RBP14.2□□□□□ -0.14
RPUSD3-216ENST00000484134 DAZ3Q9NR90 486 aaKnown RBP14.2□□□□□ -0.14
RPUSD3-216ENST00000484134 ITPR1Q14643 2758 aa14.2□□□□□ -0.14
RPUSD3-216ENST00000484134 LINC00694P0DN24 101 aa14.2□□□□□ -0.14
RPUSD3-216ENST00000484134 ZNF415Q09FC8 603 aa14.2□□□□□ -0.14
RPUSD3-216ENST00000484134 DGAT2L7PQ6IED9 249 aa14.2□□□□□ -0.14
RPUSD3-216ENST00000484134 A8MTW9 85 aa14.19□□□□□ -0.14
RPUSD3-216ENST00000484134 ACYP1P07311 99 aa14.19□□□□□ -0.14
RPUSD3-216ENST00000484134 FAM218AQ96MZ4 157 aa14.19□□□□□ -0.14
RPUSD3-216ENST00000484134 TMEM89A2RUT3 159 aa14.19□□□□□ -0.14
RPUSD3-216ENST00000484134 C2CD3Q4AC94 2353 aa14.18□□□□□ -0.14
RPUSD3-216ENST00000484134 SMIM1B2RUZ4 78 aa14.18□□□□□ -0.14
RPUSD3-216ENST00000484134 PIK3CD-AS1Q5SR53 167 aa14.18□□□□□ -0.14
RPUSD3-216ENST00000484134 CCL19Q99731 98 aa14.18□□□□□ -0.14
RPUSD3-216ENST00000484134 USP9YO00507 2555 aaPredicted RBP14.18□□□□□ -0.14
RPUSD3-216ENST00000484134 DNAJC30Q96LL9 226 aa14.18□□□□□ -0.14
RPUSD3-216ENST00000484134 MXRA5Q9NR99 2828 aa14.18□□□□□ -0.14
RPUSD3-216ENST00000484134 BAALC-AS2P0C853 105 aa14.17□□□□□ -0.14
RPUSD3-216ENST00000484134 ATP5J2P56134 94 aa14.17□□□□□ -0.14
RPUSD3-216ENST00000484134 C18orf65Q6ZTR6 163 aa14.17□□□□□ -0.14
RPUSD3-216ENST00000484134 IMUPQ9GZP8 106 aa14.17□□□□□ -0.14
RPUSD3-216ENST00000484134 DEFB136Q30KP8 78 aa14.17□□□□□ -0.14
RPUSD3-216ENST00000484134 CUBNO60494 3623 aa14.16□□□□□ -0.14
RPUSD3-216ENST00000484134 HERVK_113P63121 156 aa14.16□□□□□ -0.14
RPUSD3-216ENST00000484134 SLURP1P55000 103 aa14.16□□□□□ -0.14
RPUSD3-216ENST00000484134 SDIM1Q6ZPB5 146 aa14.16□□□□□ -0.14
RPUSD3-216ENST00000484134 LINC00643Q86TS7 51 aa14.15□□□□□ -0.14
RPUSD3-216ENST00000484134 PRORYQ9H606 182 aa14.15□□□□□ -0.14
RPUSD3-216ENST00000484134 TRAV13-1A0A0B4J241 112 aa14.15□□□□□ -0.14
RPUSD3-216ENST00000484134 RS1O15537 224 aa14.15□□□□□ -0.14
RPUSD3-216ENST00000484134 PRIMA1Q86XR5 153 aa14.15□□□□□ -0.14
RPUSD3-216ENST00000484134 TRACP01848 142 aa14.14□□□□□ -0.15
RPUSD3-216ENST00000484134 GNLYP22749 145 aa14.13□□□□□ -0.15
RPUSD3-216ENST00000484134 TMEM126AQ9H061 195 aa14.13□□□□□ -0.15
RPUSD3-216ENST00000484134 B4DSR2 109 aa14.12□□□□□ -0.15
RPUSD3-216ENST00000484134 F5H768 121 aa14.12□□□□□ -0.15
RPUSD3-216ENST00000484134 UBE2E2Q96LR5 201 aa14.12□□□□□ -0.15
RPUSD3-216ENST00000484134 Q9HAA7 133 aa14.12□□□□□ -0.15
RPUSD3-216ENST00000484134 NTM-AS1Q6ZSK4 140 aa14.11□□□□□ -0.15
RPUSD3-216ENST00000484134 UTP20O75691 2785 aaKnown RBP14.11□□□□□ -0.15
RPUSD3-216ENST00000484134 FLNCQ14315 2725 aa14.11□□□□□ -0.15
RPUSD3-216ENST00000484134 FAM19A3Q7Z5A8 133 aa14.1□□□□□ -0.15
RPUSD3-216ENST00000484134 Q96MF0 132 aa14.1□□□□□ -0.15
RPUSD3-216ENST00000484134 NOTCH3Q9UM47 2321 aa14.09□□□□□ -0.15
RPUSD3-216ENST00000484134 C3orf22Q8N5N4 141 aa14.09□□□□□ -0.15
RPUSD3-216ENST00000484134 MAP6D1Q9H9H5 199 aa14.09□□□□□ -0.15
RPUSD3-216ENST00000484134 PEMTQ9UBM1 199 aa14.09□□□□□ -0.15
RPUSD3-216ENST00000484134 ZNF702PQ9H963 129 aa14.08□□□□□ -0.15
RPUSD3-216ENST00000484134 MYO9AB2RTY4 2548 aa14.08□□□□□ -0.16
RPUSD3-216ENST00000484134 C5orf38Q86SI9 138 aa14.08□□□□□ -0.16
RPUSD3-216ENST00000484134 COPS9Q8WXC6 57 aa14.07□□□□□ -0.16
RPUSD3-216ENST00000484134 C9orf153Q5TBE3 101 aa14.07□□□□□ -0.16
RPUSD3-216ENST00000484134 GAGE2AQ6NT46 116 aa14.07□□□□□ -0.16
RPUSD3-216ENST00000484134 PPDPFQ9H3Y8 114 aa14.07□□□□□ -0.16
RPUSD3-216ENST00000484134 FAM222AQ5U5X8 452 aa14.06□□□□□ -0.16
RPUSD3-216ENST00000484134 HIST2H2BDQ6DRA6 164 aa14.06□□□□□ -0.16
RPUSD3-216ENST00000484134 CDC42SE2Q9NRR3 84 aa14.06□□□□□ -0.16
RPUSD3-216ENST00000484134 VPREB3Q9UKI3 123 aa14.06□□□□□ -0.16
RPUSD3-216ENST00000484134 XCL2Q9UBD3 114 aa14.06□□□□□ -0.16
RPUSD3-216ENST00000484134 C9orf129Q5T035 196 aaKnown RBP14.05□□□□□ -0.16
RPUSD3-216ENST00000484134 HIST2H2BCQ6DN03 193 aa14.05□□□□□ -0.16
RPUSD3-216ENST00000484134 LINC00337Q8N6G1 96 aa14.05□□□□□ -0.16
RPUSD3-216ENST00000484134 NRGNQ92686 78 aa14.05□□□□□ -0.16
RPUSD3-216ENST00000484134 INSP01308 110 aa14.05□□□□□ -0.16
RPUSD3-216ENST00000484134 CSDC2Q9Y534 153 aaKnown RBP14.05□□□□□ -0.16
RPUSD3-216ENST00000484134 CFAP46Q8IYW2 2715 aa14.05□□□□□ -0.16
RPUSD3-216ENST00000484134 USP9XQ93008 2570 aaPredicted RBP14.05□□□□□ -0.16
RPUSD3-216ENST00000484134 MALP21145 153 aa14.04□□□□□ -0.16
RPUSD3-216ENST00000484134 POLQO75417 2590 aa14.04□□□□□ -0.16
RPUSD3-216ENST00000484134 UQCRQO14949 82 aa14.04□□□□□ -0.16
RPUSD3-216ENST00000484134 IGKV2-28A0A075B6P5 120 aa14.03□□□□□ -0.16
RPUSD3-216ENST00000484134 TRGV1A0A0A0MS02 117 aa14.03□□□□□ -0.16
RPUSD3-216ENST00000484134 IGKV2D-28P01615 120 aa14.03□□□□□ -0.16
RPUSD3-216ENST00000484134 RPL28P46779 137 aaKnown RBP14.03□□□□□ -0.16
RPUSD3-216ENST00000484134 MAPK1IP1LQ8NDC0 245 aa14.03□□□□□ -0.16
RPUSD3-216ENST00000484134 LINC00526Q96FQ7 95 aa14.03□□□□□ -0.16
RPUSD3-216ENST00000484134 KLK5Q9Y337 293 aaPredicted RBP14.03□□□□□ -0.16
RPUSD3-216ENST00000484134 CXCL5P42830 114 aa14.02□□□□□ -0.16
RPUSD3-216ENST00000484134 CHD6Q8TD26 2715 aa14.02□□□□□ -0.16
RPUSD3-216ENST00000484134 INAFM2P0DMQ5 153 aa14.01□□□□□ -0.17
RPUSD3-216ENST00000484134 A0A087WYN8 130 aa14.01□□□□□ -0.17
RPUSD3-216ENST00000484134 CFAP161Q6P656 301 aa14.01□□□□□ -0.17
RPUSD3-216ENST00000484134 C1orf158Q8N1D5 194 aa14.01□□□□□ -0.17
RPUSD3-216ENST00000484134 MIR7-3HGQ8N6C7 128 aa14.01□□□□□ -0.17
RPUSD3-216ENST00000484134 C2orf48Q96LS8 159 aa14.01□□□□□ -0.17
RPUSD3-216ENST00000484134 RPL36AP83881 106 aaKnown RBP14□□□□□ -0.17
RPUSD3-216ENST00000484134 Q6ZTI0 123 aa14□□□□□ -0.17
RPUSD3-216ENST00000484134 RPL36ALQ969Q0 106 aaKnown RBP14□□□□□ -0.17
RPUSD3-216ENST00000484134 TRAV13-2A0A0B4J235 113 aa13.99□□□□□ -0.17
RPUSD3-216ENST00000484134 K7EQD1 137 aa13.99□□□□□ -0.17
RPUSD3-216ENST00000484134 IL17DQ8TAD2 202 aa13.99□□□□□ -0.17
RPUSD3-216ENST00000484134 CRPP02741 224 aa13.99□□□□□ -0.17
RPUSD3-216ENST00000484134 WNK1Q9H4A3 2382 aa13.99□□□□□ -0.17
RPUSD3-216ENST00000484134 ATP5G1P05496 136 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms