RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 MON2Q7Z3U7 1717 aa1.83□□□□□ -2.12
PTCD3-214ENST00000483925 PARP14Q460N5 1801 aa1.83□□□□□ -2.12
PTCD3-214ENST00000483925 SBF2Q86WG5 1849 aa1.83□□□□□ -2.12
PTCD3-214ENST00000483925 CTXND1A0A1B0GTU2 59 aa1.83□□□□□ -2.12
PTCD3-214ENST00000483925 ACYP2P14621 99 aa1.83□□□□□ -2.12
PTCD3-214ENST00000483925 Q96NJ1 140 aa1.83□□□□□ -2.12
PTCD3-214ENST00000483925 ARL2-SNX15V9GYD0 113 aa1.83□□□□□ -2.12
PTCD3-214ENST00000483925 IQSEC2Q5JU85 1478 aa1.82□□□□□ -2.12
PTCD3-214ENST00000483925 INTS1Q8N201 2190 aaKnown RBP1.82□□□□□ -2.12
PTCD3-214ENST00000483925 TANC1Q9C0D5 1861 aa1.82□□□□□ -2.12
PTCD3-214ENST00000483925 PLXNA1Q9UIW2 1896 aa1.82□□□□□ -2.12
PTCD3-214ENST00000483925 TRGV1A0A0A0MS02 117 aa1.82□□□□□ -2.12
PTCD3-214ENST00000483925 TRAV1-2A0A0B4J238 106 aa1.82□□□□□ -2.12
PTCD3-214ENST00000483925 ZNF720Q7Z2F6 126 aa1.82□□□□□ -2.12
PTCD3-214ENST00000483925 SMIM4Q8WVI0 70 aa1.82□□□□□ -2.12
PTCD3-214ENST00000483925 LINC01558Q9Y6Z2 57 aa1.82□□□□□ -2.12
PTCD3-214ENST00000483925 AFDNP55196 1824 aaKnown RBP1.82□□□□□ -2.12
PTCD3-214ENST00000483925 HMGXB3Q12766 1538 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 CLTCQ00610 1675 aaKnown RBP1.81□□□□□ -2.12
PTCD3-214ENST00000483925 F2Z2F3 143 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 COX17Q14061 63 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 TDRG1Q3Y452 100 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 PSMG4Q5JS54 123 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 KRTAP13-1Q8IUC0 172 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 FAM223AQ8IWN6 122 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 CASP8AP2Q9UKL3 1982 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 ERVK-7P63135 1459 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 ABCC2Q92887 1545 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 KDM5DQ9BY66 1539 aa1.81□□□□□ -2.12
PTCD3-214ENST00000483925 SIPA1L3O60292 1781 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-214ENST00000483925 COL5A1P20908 1838 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-214ENST00000483925 A0A096LNT2 108 aa1.8□□□□□ -2.12
PTCD3-214ENST00000483925 ZNF815PA8K554 130 aa1.8□□□□□ -2.12
PTCD3-214ENST00000483925 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.8□□□□□ -2.12
PTCD3-214ENST00000483925 HIGD1BQ9P298 99 aa1.8□□□□□ -2.12
PTCD3-214ENST00000483925 HIVEP2P31629 2446 aa1.8□□□□□ -2.12
PTCD3-214ENST00000483925 SNRNP200O75643 2136 aaKnown RBP1.79□□□□□ -2.12
PTCD3-214ENST00000483925 MED13Q9UHV7 2174 aa1.79□□□□□ -2.12
PTCD3-214ENST00000483925 FAM223BA6NKX1 122 aa1.79□□□□□ -2.12
PTCD3-214ENST00000483925 MGPP08493 103 aa1.79□□□□□ -2.12
PTCD3-214ENST00000483925 ADIRFQ15847 76 aa1.79□□□□□ -2.12
PTCD3-214ENST00000483925 SPCS1Q9Y6A9 102 aa1.79□□□□□ -2.12
PTCD3-214ENST00000483925 NLRP1Q9C000 1473 aa1.79□□□□□ -2.12
PTCD3-214ENST00000483925 MAP3K1Q13233 1512 aa1.79□□□□□ -2.12
PTCD3-214ENST00000483925 ARHGEF5Q12774 1597 aa1.79□□□□□ -2.12
PTCD3-214ENST00000483925 MED12Q93074 2177 aa1.79□□□□□ -2.12
PTCD3-214ENST00000483925 COL4A6Q14031 1691 aa1.78□□□□□ -2.12
PTCD3-214ENST00000483925 MYO3AQ8NEV4 1616 aa1.78□□□□□ -2.12
PTCD3-214ENST00000483925 POLA1P09884 1462 aaPredicted RBP1.78□□□□□ -2.12
PTCD3-214ENST00000483925 A0A1B0GWA3 101 aa1.78□□□□□ -2.12
PTCD3-214ENST00000483925 KANTRA0A1W2PQU2 76 aa1.78□□□□□ -2.12
PTCD3-214ENST00000483925 SNRPFP62306 86 aaKnown RBP1.78□□□□□ -2.12
PTCD3-214ENST00000483925 ETDBQ3ZM63 59 aa1.78□□□□□ -2.12
PTCD3-214ENST00000483925 SMIM11BQ8TCY0 68 aa1.78□□□□□ -2.12
PTCD3-214ENST00000483925 ST20Q9HBF5 79 aa1.78□□□□□ -2.12
PTCD3-214ENST00000483925 TCHHQ07283 1943 aa1.78□□□□□ -2.13
PTCD3-214ENST00000483925 PSME4Q14997 1843 aa1.77□□□□□ -2.13
PTCD3-214ENST00000483925 KIF14Q15058 1648 aa1.77□□□□□ -2.13
PTCD3-214ENST00000483925 ABCA4P78363 2273 aa1.77□□□□□ -2.13
PTCD3-214ENST00000483925 PRRC2BQ5JSZ5 2229 aaKnown RBP1.77□□□□□ -2.13
PTCD3-214ENST00000483925 ZNF137PP52743 207 aa1.77□□□□□ -2.13
PTCD3-214ENST00000483925 HMGN3Q15651 99 aa1.77□□□□□ -2.13
PTCD3-214ENST00000483925 CFAP126Q5VTH2 177 aa1.77□□□□□ -2.13
PTCD3-214ENST00000483925 ARFGEF1Q9Y6D6 1849 aa1.77□□□□□ -2.13
PTCD3-214ENST00000483925 PPLO60437 1756 aa1.77□□□□□ -2.13
PTCD3-214ENST00000483925 MAP3K4Q9Y6R4 1608 aa1.77□□□□□ -2.13
PTCD3-214ENST00000483925 DCAF1Q9Y4B6 1507 aa1.76□□□□□ -2.13
PTCD3-214ENST00000483925 NRXN1Q9ULB1 1477 aa1.76□□□□□ -2.13
PTCD3-214ENST00000483925 FXYD6P3P58550 94 aa1.76□□□□□ -2.13
PTCD3-214ENST00000483925 PLAC4Q8WY50 150 aa1.76□□□□□ -2.13
PTCD3-214ENST00000483925 CDK13Q14004 1512 aaKnown RBP1.76□□□□□ -2.13
PTCD3-214ENST00000483925 ZMYM4Q5VZL5 1548 aa1.76□□□□□ -2.13
PTCD3-214ENST00000483925 CACNA1BQ00975 2339 aa1.75□□□□□ -2.13
PTCD3-214ENST00000483925 LOC285556D6RIA3 1793 aa1.75□□□□□ -2.13
PTCD3-214ENST00000483925 RGPD4Q7Z3J3 1758 aa1.75□□□□□ -2.13
PTCD3-214ENST00000483925 ACYP1P07311 99 aa1.75□□□□□ -2.13
PTCD3-214ENST00000483925 RPL37P61927 97 aaKnown RBP1.75□□□□□ -2.13
PTCD3-214ENST00000483925 ALKAL2Q6UX46 152 aa1.75□□□□□ -2.13
PTCD3-214ENST00000483925 LINC01600Q96MT4 127 aa1.75□□□□□ -2.13
PTCD3-214ENST00000483925 C7orf77A4D0Y5 90 aa1.74□□□□□ -2.13
PTCD3-214ENST00000483925 F8WEM9 126 aa1.74□□□□□ -2.13
PTCD3-214ENST00000483925 LY6G6CO95867 125 aa1.74□□□□□ -2.13
PTCD3-214ENST00000483925 ANGP03950 147 aaKnown RBP1.74□□□□□ -2.13
PTCD3-214ENST00000483925 LYNX1P0DP58 116 aa1.74□□□□□ -2.13
PTCD3-214ENST00000483925 NMSQ5H8A3 153 aa1.74□□□□□ -2.13
PTCD3-214ENST00000483925 PRR15LQ9BU68 103 aa1.74□□□□□ -2.13
PTCD3-214ENST00000483925 KIF21AQ7Z4S6 1674 aa1.74□□□□□ -2.13
PTCD3-214ENST00000483925 ESPL1Q14674 2120 aa1.73□□□□□ -2.13
PTCD3-214ENST00000483925 GVQW2A0A096LPI5 108 aaPredicted RBP1.73□□□□□ -2.13
PTCD3-214ENST00000483925 C10orf142B7Z368 130 aa1.73□□□□□ -2.13
PTCD3-214ENST00000483925 M0R3E3 92 aa1.73□□□□□ -2.13
PTCD3-214ENST00000483925 HMGN2P05204 90 aaKnown RBP1.73□□□□□ -2.13
PTCD3-214ENST00000483925 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
PTCD3-214ENST00000483925 Q6ZRX8 168 aa1.73□□□□□ -2.13
PTCD3-214ENST00000483925 LINC00643Q86TS7 51 aa1.73□□□□□ -2.13
PTCD3-214ENST00000483925 IFT172Q9UG01 1749 aa1.73□□□□□ -2.13
PTCD3-214ENST00000483925 PI4KAP42356 2102 aa1.72□□□□□ -2.13
PTCD3-214ENST00000483925 ARMS2P0C7Q2 107 aa1.72□□□□□ -2.13
PTCD3-214ENST00000483925 GCHFRP30047 84 aa1.72□□□□□ -2.13
PTCD3-214ENST00000483925 SPRR4Q96PI1 79 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms