RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 PFDN1O60925 122 aa6.47□□□□□ -1.37
SMARCC1-205ENST00000483847 TSPAN13O95857 204 aa6.47□□□□□ -1.37
SMARCC1-205ENST00000483847 SS18Q15532 418 aa6.47□□□□□ -1.37
SMARCC1-205ENST00000483847 SFT2D1Q8WV19 159 aa6.47□□□□□ -1.37
SMARCC1-205ENST00000483847 CAMK2N2Q96S95 79 aa6.47□□□□□ -1.37
SMARCC1-205ENST00000483847 CYTL1Q9NRR1 136 aa6.47□□□□□ -1.37
SMARCC1-205ENST00000483847 TRAV1-1A0A0B4J248 108 aa6.46□□□□□ -1.38
SMARCC1-205ENST00000483847 A0A1B0GVG6 124 aa6.46□□□□□ -1.38
SMARCC1-205ENST00000483847 SDHAF1A6NFY7 115 aa6.46□□□□□ -1.38
SMARCC1-205ENST00000483847 BCL2L11O43521 198 aa6.46□□□□□ -1.38
SMARCC1-205ENST00000483847 CENPWQ5EE01 88 aa6.46□□□□□ -1.38
SMARCC1-205ENST00000483847 TMEM101Q96IK0 257 aa6.46□□□□□ -1.38
SMARCC1-205ENST00000483847 BTF3L4Q96K17 158 aa6.46□□□□□ -1.38
SMARCC1-205ENST00000483847 IFNA1P01562 189 aa6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 ESDP10768 282 aa6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 MALP21145 153 aa6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 CTRLP40313 264 aa6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 RPL13AP40429 203 aaKnown RBP6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 FOXA3P55318 350 aaPredicted RBP6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 TWIST1Q15672 202 aa6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 C9orf62Q8N4C0 152 aa6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 FAM213BQ8TBF2 198 aa6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 MBD3L1Q8WWY6 194 aa6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 CDC42SE2Q9NRR3 84 aa6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 TMA7Q9Y2S6 64 aaKnown RBP6.45□□□□□ -1.38
SMARCC1-205ENST00000483847 RAB19A4D1S5 217 aa6.44□□□□□ -1.38
SMARCC1-205ENST00000483847 COX7A2LO14548 114 aa6.44□□□□□ -1.38
SMARCC1-205ENST00000483847 TSHBP01222 138 aa6.44□□□□□ -1.38
SMARCC1-205ENST00000483847 EIF5AL1Q6IS14 154 aaKnown RBP6.44□□□□□ -1.38
SMARCC1-205ENST00000483847 KRTAP7-1Q8IUC3 87 aa6.44□□□□□ -1.38
SMARCC1-205ENST00000483847 KCNRGQ8N5I3 272 aa6.44□□□□□ -1.38
SMARCC1-205ENST00000483847 C2orf48Q96LS8 159 aa6.44□□□□□ -1.38
SMARCC1-205ENST00000483847 I3L3M4 83 aa6.43□□□□□ -1.38
SMARCC1-205ENST00000483847 GIPP09681 153 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-205ENST00000483847 PMCHP20382 165 aa6.43□□□□□ -1.38
SMARCC1-205ENST00000483847 FAM19A5Q7Z5A7 132 aaPredicted RBP6.43□□□□□ -1.38
SMARCC1-205ENST00000483847 C11orf52Q96A22 123 aa6.43□□□□□ -1.38
SMARCC1-205ENST00000483847 CNFNQ9BYD5 112 aa6.43□□□□□ -1.38
SMARCC1-205ENST00000483847 TMEM242Q9NWH2 141 aa6.43□□□□□ -1.38
SMARCC1-205ENST00000483847 XKRY2A2RUG3 117 aa6.42□□□□□ -1.38
SMARCC1-205ENST00000483847 G3V3Q6 166 aa6.42□□□□□ -1.38
SMARCC1-205ENST00000483847 RGS21Q2M5E4 152 aa6.42□□□□□ -1.38
SMARCC1-205ENST00000483847 RNASE13Q5GAN3 156 aaKnown RBP6.42□□□□□ -1.38
SMARCC1-205ENST00000483847 C5orf38Q86SI9 138 aa6.42□□□□□ -1.38
SMARCC1-205ENST00000483847 MRPL52Q86TS9 123 aaKnown RBP6.42□□□□□ -1.38
SMARCC1-205ENST00000483847 MRAP2Q96G30 205 aa6.42□□□□□ -1.38
SMARCC1-205ENST00000483847 CRCT1Q9UGL9 99 aa6.42□□□□□ -1.38
SMARCC1-205ENST00000483847 hCG_2014768A0A024R1R8 64 aa6.41□□□□□ -1.38
SMARCC1-205ENST00000483847 TRBV20OR9-2A0A075B6H5 130 aa6.41□□□□□ -1.38
SMARCC1-205ENST00000483847 ARPC5O15511 151 aa6.41□□□□□ -1.38
SMARCC1-205ENST00000483847 GNG4P50150 75 aa6.41□□□□□ -1.38
SMARCC1-205ENST00000483847 CCL20P78556 96 aa6.41□□□□□ -1.38
SMARCC1-205ENST00000483847 SPAG11BQ08648 103 aa6.41□□□□□ -1.38
SMARCC1-205ENST00000483847 RNF151Q2KHN1 245 aa6.41□□□□□ -1.38
SMARCC1-205ENST00000483847 TSKUQ8WUA8 353 aa6.41□□□□□ -1.38
SMARCC1-205ENST00000483847 RNASE7Q9H1E1 156 aaKnown RBP6.41□□□□□ -1.38
SMARCC1-205ENST00000483847 CARHSP1Q9Y2V2 147 aaKnown RBP6.41□□□□□ -1.38
SMARCC1-205ENST00000483847 TRBV6-5A0A0K0K1A5 114 aa6.4□□□□□ -1.38
SMARCC1-205ENST00000483847 C1orf196B1AJZ1 125 aa6.4□□□□□ -1.38
SMARCC1-205ENST00000483847 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
SMARCC1-205ENST00000483847 NUDT10Q8NFP7 164 aa6.4□□□□□ -1.38
SMARCC1-205ENST00000483847 NUDT11Q96G61 164 aa6.4□□□□□ -1.38
SMARCC1-205ENST00000483847 RPP21Q9H633 154 aaKnown RBP6.4□□□□□ -1.38
SMARCC1-205ENST00000483847 H2AFB1P0C5Y9 115 aa6.39□□□□□ -1.39
SMARCC1-205ENST00000483847 RETNLBQ9BQ08 111 aa6.39□□□□□ -1.39
SMARCC1-205ENST00000483847 MRPL35Q9NZE8 188 aaKnown RBP6.39□□□□□ -1.39
SMARCC1-205ENST00000483847 GNG13Q9P2W3 67 aa6.39□□□□□ -1.39
SMARCC1-205ENST00000483847 A0A087X002 238 aa6.38□□□□□ -1.39
SMARCC1-205ENST00000483847 TRAV13-1A0A0B4J241 112 aa6.38□□□□□ -1.39
SMARCC1-205ENST00000483847 UMAD1C9J7I0 102 aa6.38□□□□□ -1.39
SMARCC1-205ENST00000483847 M0QXV9 152 aa6.38□□□□□ -1.39
SMARCC1-205ENST00000483847 UBE2BP63146 152 aa6.38□□□□□ -1.39
SMARCC1-205ENST00000483847 GAGE2EQ4V326 116 aa6.38□□□□□ -1.39
SMARCC1-205ENST00000483847 TEX261Q6UWH6 196 aa6.38□□□□□ -1.39
SMARCC1-205ENST00000483847 SMIM12Q96EX1 92 aa6.38□□□□□ -1.39
SMARCC1-205ENST00000483847 IMMP2LQ96T52 175 aa6.38□□□□□ -1.39
SMARCC1-205ENST00000483847 GAGE2DQ9UEU5 116 aa6.38□□□□□ -1.39
SMARCC1-205ENST00000483847 C7orf77A4D0Y5 90 aa6.37□□□□□ -1.39
SMARCC1-205ENST00000483847 UNQ6190/PRO20217Q6UXQ8 127 aa6.37□□□□□ -1.39
SMARCC1-205ENST00000483847 SMIM15Q7Z3B0 74 aa6.37□□□□□ -1.39
SMARCC1-205ENST00000483847 ORAOV1Q8WV07 137 aa6.37□□□□□ -1.39
SMARCC1-205ENST00000483847 ST20Q9HBF5 79 aa6.37□□□□□ -1.39
SMARCC1-205ENST00000483847 MANBALQ9NQG1 85 aa6.37□□□□□ -1.39
SMARCC1-205ENST00000483847 C6orf48Q9UBA6 75 aa6.37□□□□□ -1.39
SMARCC1-205ENST00000483847 TLX1NBP0CAT3 122 aa6.36□□□□□ -1.39
SMARCC1-205ENST00000483847 POLR2KP53803 58 aaKnown RBP6.36□□□□□ -1.39
SMARCC1-205ENST00000483847 C21orf62-AS1Q17RA5 79 aa6.36□□□□□ -1.39
SMARCC1-205ENST00000483847 Q6ZUT4 128 aa6.36□□□□□ -1.39
SMARCC1-205ENST00000483847 OR10D4PQ8NGN7 298 aa6.36□□□□□ -1.39
SMARCC1-205ENST00000483847 SMDT1Q9H4I9 107 aa6.36□□□□□ -1.39
SMARCC1-205ENST00000483847 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
SMARCC1-205ENST00000483847 TRBV27A0A0K0K1C4 114 aa6.35□□□□□ -1.39
SMARCC1-205ENST00000483847 SMLR1H3BR10 107 aa6.35□□□□□ -1.39
SMARCC1-205ENST00000483847 NDUFA1O15239 70 aa6.35□□□□□ -1.39
SMARCC1-205ENST00000483847 ZNF861PO60384 105 aa6.35□□□□□ -1.39
SMARCC1-205ENST00000483847 CDIP1Q9H305 208 aa6.35□□□□□ -1.39
SMARCC1-205ENST00000483847 MED9Q9NWA0 146 aa6.35□□□□□ -1.39
SMARCC1-205ENST00000483847 K7EN84 100 aa6.34□□□□□ -1.39
SMARCC1-205ENST00000483847 TYMSOSQ8TAI1 123 aa6.34□□□□□ -1.39
SMARCC1-205ENST00000483847 FAM210AQ96ND0 272 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms