RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 UMAD1C9J7I0 102 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 PHOX2AO14813 284 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 ARPC5O15511 151 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 NDUFS6O75380 124 aaKnown RBP3.7□□□□□ -1.82
CSDE1-207ENST00000483407 TRGC1P0CF51 173 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 RPS10P46783 165 aaKnown RBP3.7□□□□□ -1.82
CSDE1-207ENST00000483407 RPS20P60866 119 aaKnown RBP3.7□□□□□ -1.82
CSDE1-207ENST00000483407 CACNG7P62955 275 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 COTL1Q14019 142 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 RASL11AQ6T310 242 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 TMUB2Q71RG4 321 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 FER1L6-AS1Q8NA97 138 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 FAM213BQ8TBF2 198 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 GTSF1Q8WW33 167 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 PGLYRP4Q96LB8 373 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 CYTL1Q9NRR1 136 aa3.7□□□□□ -1.82
CSDE1-207ENST00000483407 IGKV2-24A0A0C4DH68 120 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 A0A1B0GV50 99 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 XKRY2A2RUG3 117 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 F2Z2F3 143 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 RPL35P42766 123 aaKnown RBP3.69□□□□□ -1.82
CSDE1-207ENST00000483407 COX6A2Q02221 97 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 MAJINQ3KP22 176 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 KCNRGQ8N5I3 272 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 OR2D3Q8NGH3 330 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 MBD3L1Q8WWY6 194 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 C2orf48Q96LS8 159 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 LINC01600Q96MT4 127 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 GFRA4Q9GZZ7 299 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 NIT2Q9NQR4 276 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 PKIGQ9Y2B9 76 aa3.69□□□□□ -1.82
CSDE1-207ENST00000483407 IGKV3OR2-268A0A0C4DH90 116 aa3.68□□□□□ -1.82
CSDE1-207ENST00000483407 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
CSDE1-207ENST00000483407 EIF5AP63241 154 aaKnown RBP3.68□□□□□ -1.82
CSDE1-207ENST00000483407 PRR3P79522 188 aaKnown RBP3.68□□□□□ -1.82
CSDE1-207ENST00000483407 HIGD2BQ4VC39 106 aa3.68□□□□□ -1.82
CSDE1-207ENST00000483407 AMMECR1LQ6DCA0 310 aa3.68□□□□□ -1.82
CSDE1-207ENST00000483407 REG3GQ6UW15 175 aa3.68□□□□□ -1.82
CSDE1-207ENST00000483407 C15orf56Q8N910 161 aa3.68□□□□□ -1.82
CSDE1-207ENST00000483407 SMIM12Q96EX1 92 aa3.68□□□□□ -1.82
CSDE1-207ENST00000483407 FAM218AQ96MZ4 157 aa3.68□□□□□ -1.82
CSDE1-207ENST00000483407 LINC00474Q9P2X8 69 aa3.68□□□□□ -1.82
CSDE1-207ENST00000483407 A0A0J9YXV3 536 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 G3V3Q6 166 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 TEX46H3BTG2 121 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 IFNA1P01562 189 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 NTF3P20783 257 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 ZNF345Q14585 488 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 CENPWQ5EE01 88 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 RNASEKQ6P5S7 137 aaKnown RBP3.67□□□□□ -1.82
CSDE1-207ENST00000483407 SPINK6Q6UWN8 80 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 LYPD6BQ8NI32 183 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 CHCHD10Q8WYQ3 142 aaPredicted RBP3.67□□□□□ -1.82
CSDE1-207ENST00000483407 C11orf52Q96A22 123 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 MANBALQ9NQG1 85 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 BIN3Q9NQY0 253 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 GNG13Q9P2W3 67 aa3.67□□□□□ -1.82
CSDE1-207ENST00000483407 GVQW2A0A096LPI5 108 aaPredicted RBP3.66□□□□□ -1.82
CSDE1-207ENST00000483407 KANTRA0A1W2PQU2 76 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 C19orf71A6NCJ1 209 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 H7C423 109 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 ATP6V1G1O75348 118 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 NCR2O95944 276 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 APCSP02743 223 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 GNG4P50150 75 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 CCL20P78556 96 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 LYZL1Q6UWQ5 148 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 SMIM15Q7Z3B0 74 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 BTF3L4Q96K17 158 aa3.66□□□□□ -1.82
CSDE1-207ENST00000483407 A0A096LNI7 61 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 IGHV1-58A0A0C4DH39 117 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 BCL2L11O43521 198 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 PDE6DO43924 150 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 FGF6P10767 208 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 ZNF25P17030 456 aaPredicted RBP3.65□□□□□ -1.83
CSDE1-207ENST00000483407 CTRLP40313 264 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 HERV-K104P63124 156 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 TEX261Q6UWH6 196 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 Q6ZRP5 223 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 Q6ZVQ6 151 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 C9orf62Q8N4C0 152 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 TMEM101Q96IK0 257 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 BATF3Q9NR55 127 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 PYGO1Q9Y3Y4 419 aa3.65□□□□□ -1.83
CSDE1-207ENST00000483407 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-207ENST00000483407 TRAV1-1A0A0B4J248 108 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 TRAV26-2A0A0B4J265 109 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 IGKV2-29A2NJV5 120 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-207ENST00000483407 RAB19A4D1S5 217 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 HMSDA8MTL9 139 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 SMLR1H3BR10 107 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 XCL1P47992 114 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 KRTAP10-8P60410 259 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 MEF2BQ02080 365 aaPredicted RBP3.64□□□□□ -1.83
CSDE1-207ENST00000483407 RGS21Q2M5E4 152 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 EIF5AL1Q6IS14 154 aaKnown RBP3.64□□□□□ -1.83
CSDE1-207ENST00000483407 GATD1Q8NB37 220 aa3.64□□□□□ -1.83
CSDE1-207ENST00000483407 OR5A1Q8NGJ0 315 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms