RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 KLK9Q9UKQ9 250 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 R4GN34 69 aa2.03□□□□□ -2.08
SHQ1-208ENST00000482785 TSTD3H0UI37 97 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 H3BPC8 53 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 LEPROTO15243 131 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 IFNA7P01567 189 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 IGKV1-5P01602 117 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 APOA2P02652 100 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 SMIM17P0DL12 118 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 ZNF22P17026 224 aaPredicted RBP2.02□□□□□ -2.09
SHQ1-208ENST00000482785 RAB4BP61018 213 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 FLI1Q01543 452 aaPredicted RBP2.02□□□□□ -2.09
SHQ1-208ENST00000482785 FXYD3Q14802 87 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 PLGLAQ15195 96 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 MSMO1Q15800 293 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 MIAQ16674 131 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 RTL8BQ17RB0 113 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 SCGB2B2Q4G0G5 96 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 TMEM78Q5T7P6 136 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 AADACL3Q5VUY0 350 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 LINC00299Q6ZSB3 139 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 C2orf91Q6ZV80 131 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 USMG5Q96IX5 58 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 DERL1Q9BUN8 251 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 HIGD2AQ9BW72 106 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 TTTY13Q9BZ97 58 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 ATG5Q9H1Y0 275 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 CYTL1Q9NRR1 136 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 COMMD3Q9UBI1 195 aa2.02□□□□□ -2.09
SHQ1-208ENST00000482785 MAP1LC3B2A6NCE7 125 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 FAM223BA6NKX1 122 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 FAM25AB3EWG3 89 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 FAM25CB3EWG5 89 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 FAM25GB3EWG6 89 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 CREBL2O60519 120 aaPredicted RBP2.01□□□□□ -2.09
SHQ1-208ENST00000482785 PFDN1O60925 122 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 ATP5G3P48201 142 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 GNG2P59768 71 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 KRTAP10-5P60370 271 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 MRPS10P82664 201 aaKnown RBP2.01□□□□□ -2.09
SHQ1-208ENST00000482785 SSBP1Q04837 148 aaKnown RBP2.01□□□□□ -2.09
SHQ1-208ENST00000482785 RHEBQ15382 184 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 VMA21Q3ZAQ7 101 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 LYRM7Q5U5X0 104 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 UNQ5815/PRO19632Q6UWF5 114 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 FAM223AQ8IWN6 122 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 TTC9CQ8N5M4 171 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 OR5H6Q8NGV6 325 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 VSTM2AQ8TAG5 236 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 DEDD2Q8WXF8 326 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 LINC00167Q96N53 147 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 GINS4Q9BRT9 223 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 ZNF2Q9BSG1 426 aaPredicted RBP2.01□□□□□ -2.09
SHQ1-208ENST00000482785 IMUPQ9GZP8 106 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 MAP1LC3BQ9GZQ8 125 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 TP73-AS1Q9UF72 201 aa2.01□□□□□ -2.09
SHQ1-208ENST00000482785 FABP5P3A8MUU1 101 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 GABARAPH6UMI1 98 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 HIST1H1BP16401 226 aaKnown RBP2□□□□□ -2.09
SHQ1-208ENST00000482785 NFYAP23511 347 aaPredicted RBP2□□□□□ -2.09
SHQ1-208ENST00000482785 ETV6P41212 452 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 PIGPP57054 158 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 DEFA3P59666 94 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 SS18Q15532 418 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 TPRXLQ17RH7 258 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 FAM24BQ8N5W8 94 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 GRPEL2Q8TAA5 225 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 TMEM167AQ8TBQ9 72 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 S100ZQ8WXG8 99 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 MAFIPQ8WZ33 124 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 BORCS5Q969J3 196 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 FAM103A1Q9BTL3 118 aaKnown RBP2□□□□□ -2.09
SHQ1-208ENST00000482785 TMEM14BQ9NUH8 114 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 TAS2R8Q9NYW2 309 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 PSORS1C2Q9UIG4 136 aa2□□□□□ -2.09
SHQ1-208ENST00000482785 RBM7Q9Y580 266 aaKnown RBP2□□□□□ -2.09
SHQ1-208ENST00000482785 TRBV7-1A0A0A6YYK4 115 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 E7EUB6 86 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 GGCTO75223 188 aaKnown RBP1.99□□□□□ -2.09
SHQ1-208ENST00000482785 PGLYRP1O75594 196 aaPredicted RBP1.99□□□□□ -2.09
SHQ1-208ENST00000482785 DHFRP00374 187 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 PPYP01298 95 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 SAA1P0DJI8 122 aaPredicted RBP1.99□□□□□ -2.09
SHQ1-208ENST00000482785 S100GP29377 79 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 RHOGP84095 191 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 MEF2BQ02080 365 aaPredicted RBP1.99□□□□□ -2.09
SHQ1-208ENST00000482785 KRTAP13-2Q52LG2 175 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 PYDC2Q56P42 97 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 SPINK6Q6UWN8 80 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 TOMM20LQ6UXN7 152 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 ZNF705AQ6ZN79 300 aaPredicted RBP1.99□□□□□ -2.09
SHQ1-208ENST00000482785 SNX29P2Q8IUI4 249 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 TMEM229BQ8NBD8 167 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 OR10D4PQ8NGN7 298 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 SMIM4Q8WVI0 70 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 PLEKHB2Q96CS7 222 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 COA4Q9NYJ1 87 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 BET1LQ9NYM9 111 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 HSPB11Q9Y547 144 aa1.99□□□□□ -2.09
SHQ1-208ENST00000482785 IGLC7A0M8Q6 106 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms