RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 TMEM14DPA8MWL7 114 aa2.4□□□□□ -2.03
VPS41-212ENST00000482217 CISD3P0C7P0 127 aa2.4□□□□□ -2.03
VPS41-212ENST00000482217 MDKP21741 143 aaPredicted RBP2.4□□□□□ -2.03
VPS41-212ENST00000482217 GCHFRP30047 84 aa2.4□□□□□ -2.03
VPS41-212ENST00000482217 SMIM11AP58511 58 aa2.4□□□□□ -2.03
VPS41-212ENST00000482217 NDUFA4L2Q9NRX3 87 aa2.4□□□□□ -2.03
VPS41-212ENST00000482217 TMEM14BQ9NUH8 114 aa2.4□□□□□ -2.03
VPS41-212ENST00000482217 GCC2Q8IWJ2 1684 aa2.4□□□□□ -2.03
VPS41-212ENST00000482217 PLA2R1Q13018 1463 aa2.39□□□□□ -2.03
VPS41-212ENST00000482217 ABCA4P78363 2273 aa2.39□□□□□ -2.03
VPS41-212ENST00000482217 PAPPAQ13219 1627 aa2.39□□□□□ -2.03
VPS41-212ENST00000482217 ALKQ9UM73 1620 aa2.39□□□□□ -2.03
VPS41-212ENST00000482217 ALS2Q96Q42 1657 aa2.39□□□□□ -2.03
VPS41-212ENST00000482217 C6orf201Q7Z4U5 140 aa2.39□□□□□ -2.03
VPS41-212ENST00000482217 TVP23CQ96ET8 276 aa2.39□□□□□ -2.03
VPS41-212ENST00000482217 MAST1Q9Y2H9 1570 aa2.39□□□□□ -2.03
VPS41-212ENST00000482217 ARFGEF3Q5TH69 2177 aa2.39□□□□□ -2.03
VPS41-212ENST00000482217 KDM6BO15054 1643 aa2.39□□□□□ -2.03
VPS41-212ENST00000482217 LOC285556D6RIA3 1793 aa2.38□□□□□ -2.03
VPS41-212ENST00000482217 COL4A1P02462 1669 aa2.38□□□□□ -2.03
VPS41-212ENST00000482217 TRAV23DV6A0A075B6W5 121 aa2.38□□□□□ -2.03
VPS41-212ENST00000482217 IGLV3-32A0A0A0MS00 114 aa2.38□□□□□ -2.03
VPS41-212ENST00000482217 TRBV10-1A0A0K0K1A3 114 aa2.38□□□□□ -2.03
VPS41-212ENST00000482217 IGHV3-33P01772 117 aa2.38□□□□□ -2.03
VPS41-212ENST00000482217 COX6CP09669 75 aa2.38□□□□□ -2.03
VPS41-212ENST00000482217 CNBPP62633 177 aaKnown RBP2.38□□□□□ -2.03
VPS41-212ENST00000482217 C2orf82Q6UX34 121 aa2.38□□□□□ -2.03
VPS41-212ENST00000482217 CEP170BQ9Y4F5 1589 aaPredicted RBP2.38□□□□□ -2.03
VPS41-212ENST00000482217 PARP4Q9UKK3 1724 aaKnown RBP2.37□□□□□ -2.03
VPS41-212ENST00000482217 IGKV3-7A0A075B6H7 116 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 FXYD6-FXYD2A0A087WZ82 144 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 TRBV6-7A0A0A0MS04 114 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 LOC101927531A0A1B0GV80 90 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 NUPR2A6NF83 97 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 ZNF815PA8K554 130 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 HMGN4O00479 90 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 PSCAO43653 123 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 PDE6HQ13956 83 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 PYDC2Q56P42 97 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 C1orf137Q5JT78 98 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 SMIM5Q71RC9 77 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 DYNLRB1Q9NP97 96 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 MRPL36Q9P0J6 103 aaKnown RBP2.37□□□□□ -2.03
VPS41-212ENST00000482217 PRO2289Q9P1D8 64 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 ZNF831Q5JPB2 1677 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 DNAJC13O75165 2243 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 ATP7AQ04656 1500 aa2.37□□□□□ -2.03
VPS41-212ENST00000482217 COL14A1Q05707 1796 aaKnown RBP2.36□□□□□ -2.03
VPS41-212ENST00000482217 ANKRD50Q9ULJ7 1429 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 LOC285095A0A1B0GVY8 99 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 A0A1B0GWA3 101 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 PLGLAQ15195 96 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 PSMG4Q5JS54 123 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 Q6JHZ5 121 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 LYPD1Q8N2G4 141 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 FXYD6Q9H0Q3 95 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 ARL2-SNX15V9GYD0 113 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 RICTORQ6R327 1708 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 DLEC1Q9Y238 1755 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 UGGT1Q9NYU2 1555 aa2.36□□□□□ -2.03
VPS41-212ENST00000482217 PRRC2BQ5JSZ5 2229 aaKnown RBP2.36□□□□□ -2.03
VPS41-212ENST00000482217 EIF2AK4Q9P2K8 1649 aaKnown RBP2.35□□□□□ -2.03
VPS41-212ENST00000482217 SHPRHQ149N8 1683 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 RREB1Q92766 1687 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 CD163L1Q9NR16 1453 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 TIAM2Q8IVF5 1701 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 CEBPZOSA8MTT3 80 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 CTSGP08311 255 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 S100A3P33764 101 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 NDUFA11Q86Y39 141 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 Q9BRP9 147 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 FAM103A1Q9BTL3 118 aaKnown RBP2.35□□□□□ -2.03
VPS41-212ENST00000482217 HIGD2AQ9BW72 106 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 SLIT2O94813 1529 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 ZMYM4Q5VZL5 1548 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 VWDEQ8N2E2 1590 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 DEPDC5O75140 1603 aa2.35□□□□□ -2.03
VPS41-212ENST00000482217 TRBV6-8A0A0A6YYG3 113 aa2.34□□□□□ -2.03
VPS41-212ENST00000482217 H3BVH4 76 aa2.34□□□□□ -2.03
VPS41-212ENST00000482217 HCRTO43612 131 aa2.34□□□□□ -2.03
VPS41-212ENST00000482217 HRES1P13985 223 aa2.34□□□□□ -2.03
VPS41-212ENST00000482217 TPRXLQ17RH7 258 aa2.34□□□□□ -2.03
VPS41-212ENST00000482217 FDCSPQ8NFU4 85 aa2.34□□□□□ -2.03
VPS41-212ENST00000482217 DMAC1Q96GE9 116 aa2.34□□□□□ -2.03
VPS41-212ENST00000482217 PRR15LQ9BU68 103 aa2.34□□□□□ -2.03
VPS41-212ENST00000482217 UBE2D4Q9Y2X8 147 aa2.34□□□□□ -2.03
VPS41-212ENST00000482217 PKD1L3Q7Z443 1732 aa2.34□□□□□ -2.04
VPS41-212ENST00000482217 MRC1P22897 1456 aa2.33□□□□□ -2.04
VPS41-212ENST00000482217 SEC16AO15027 2179 aa2.33□□□□□ -2.04
VPS41-212ENST00000482217 IGKV1-17P01599 117 aa2.33□□□□□ -2.04
VPS41-212ENST00000482217 ARMS2P0C7Q2 107 aa2.33□□□□□ -2.04
VPS41-212ENST00000482217 BAGE3Q86Y29 109 aa2.33□□□□□ -2.04
VPS41-212ENST00000482217 BAGE2Q86Y30 109 aa2.33□□□□□ -2.04
VPS41-212ENST00000482217 PATE1Q8WXA2 126 aa2.33□□□□□ -2.04
VPS41-212ENST00000482217 CCL26Q9Y258 94 aa2.33□□□□□ -2.04
VPS41-212ENST00000482217 EFCAB6Q5THR3 1501 aa2.32□□□□□ -2.04
VPS41-212ENST00000482217 ZFHX3Q15911 3703 aa2.32□□□□□ -2.04
VPS41-212ENST00000482217 E9PCH4 1651 aa2.32□□□□□ -2.04
VPS41-212ENST00000482217 DOCK10Q96BY6 2186 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms