RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 TRAPPC1Q9Y5R8 145 aa6.29□□□□□ -1.4
TMEM39A-207ENST00000482162 TRAV8-4A0A0B4J246 113 aa6.28□□□□□ -1.4
TMEM39A-207ENST00000482162 CRPP02741 224 aa6.28□□□□□ -1.4
TMEM39A-207ENST00000482162 APCSP02743 223 aa6.28□□□□□ -1.4
TMEM39A-207ENST00000482162 MGPP08493 103 aa6.28□□□□□ -1.4
TMEM39A-207ENST00000482162 FAM104BQ5XKR9 115 aa6.28□□□□□ -1.4
TMEM39A-207ENST00000482162 TMEM243Q9BU79 118 aa6.28□□□□□ -1.4
TMEM39A-207ENST00000482162 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
TMEM39A-207ENST00000482162 IGLV4-60A0A075B6I1 120 aa6.27□□□□□ -1.41
TMEM39A-207ENST00000482162 KRTAP29-1A8MX34 341 aaPredicted RBP6.27□□□□□ -1.41
TMEM39A-207ENST00000482162 PPP1R17O96001 155 aa6.27□□□□□ -1.41
TMEM39A-207ENST00000482162 PPBPP02775 128 aa6.27□□□□□ -1.41
TMEM39A-207ENST00000482162 REG3AQ06141 175 aa6.27□□□□□ -1.41
TMEM39A-207ENST00000482162 SDIM1Q6ZPB5 146 aa6.27□□□□□ -1.41
TMEM39A-207ENST00000482162 MRAP2Q96G30 205 aa6.27□□□□□ -1.41
TMEM39A-207ENST00000482162 CNBPP62633 177 aaKnown RBP6.26□□□□□ -1.41
TMEM39A-207ENST00000482162 FABP9Q0Z7S8 132 aa6.26□□□□□ -1.41
TMEM39A-207ENST00000482162 AMN1Q8IY45 258 aa6.26□□□□□ -1.41
TMEM39A-207ENST00000482162 DEFB104AQ8WTQ1 72 aa6.26□□□□□ -1.41
TMEM39A-207ENST00000482162 LAMTOR2Q9Y2Q5 125 aa6.26□□□□□ -1.41
TMEM39A-207ENST00000482162 TRBV6-5A0A0K0K1A5 114 aa6.25□□□□□ -1.41
TMEM39A-207ENST00000482162 C1orf196B1AJZ1 125 aa6.25□□□□□ -1.41
TMEM39A-207ENST00000482162 SLPIP03973 132 aa6.25□□□□□ -1.41
TMEM39A-207ENST00000482162 RAB4AP20338 218 aa6.25□□□□□ -1.41
TMEM39A-207ENST00000482162 CKS2P33552 79 aa6.25□□□□□ -1.41
TMEM39A-207ENST00000482162 CIRBPQ14011 172 aaKnown RBP6.25□□□□□ -1.41
TMEM39A-207ENST00000482162 COTL1Q14019 142 aa6.25□□□□□ -1.41
TMEM39A-207ENST00000482162 MRPL51Q4U2R6 128 aaKnown RBP6.25□□□□□ -1.41
TMEM39A-207ENST00000482162 ORMDL3Q8N138 153 aa6.25□□□□□ -1.41
TMEM39A-207ENST00000482162 H7C423 109 aa6.24□□□□□ -1.41
TMEM39A-207ENST00000482162 NCR2O95944 276 aa6.24□□□□□ -1.41
TMEM39A-207ENST00000482162 TRGC2P03986 189 aa6.24□□□□□ -1.41
TMEM39A-207ENST00000482162 CLPSL2Q6UWE3 100 aa6.24□□□□□ -1.41
TMEM39A-207ENST00000482162 RNF185Q96GF1 192 aa6.24□□□□□ -1.41
TMEM39A-207ENST00000482162 TRAV26-2A0A0B4J265 109 aa6.23□□□□□ -1.41
TMEM39A-207ENST00000482162 D6R8Y8 96 aa6.23□□□□□ -1.41
TMEM39A-207ENST00000482162 PANO1I0J062 215 aa6.23□□□□□ -1.41
TMEM39A-207ENST00000482162 PHOX2AO14813 284 aa6.23□□□□□ -1.41
TMEM39A-207ENST00000482162 AMTP48728 403 aa6.23□□□□□ -1.41
TMEM39A-207ENST00000482162 RAB5BP61020 215 aa6.23□□□□□ -1.41
TMEM39A-207ENST00000482162 RPL39LQ96EH5 51 aaKnown RBP6.23□□□□□ -1.41
TMEM39A-207ENST00000482162 PRELID3AQ96N28 172 aa6.23□□□□□ -1.41
TMEM39A-207ENST00000482162 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
TMEM39A-207ENST00000482162 IGLV10-54A0A075B6I4 117 aa6.22□□□□□ -1.41
TMEM39A-207ENST00000482162 ESDP10768 282 aa6.22□□□□□ -1.41
TMEM39A-207ENST00000482162 ALKBH7Q9BT30 221 aaPredicted RBP6.22□□□□□ -1.41
TMEM39A-207ENST00000482162 SDHAF1A6NFY7 115 aa6.21□□□□□ -1.42
TMEM39A-207ENST00000482162 GAS8-AS1O95177 125 aa6.21□□□□□ -1.42
TMEM39A-207ENST00000482162 POLR2KP53803 58 aaKnown RBP6.21□□□□□ -1.42
TMEM39A-207ENST00000482162 KIAA1644Q3SXP7 199 aa6.21□□□□□ -1.42
TMEM39A-207ENST00000482162 C15orf56Q8N910 161 aa6.21□□□□□ -1.42
TMEM39A-207ENST00000482162 C20orf78Q9BR46 151 aa6.21□□□□□ -1.42
TMEM39A-207ENST00000482162 MAP1LC3AQ9H492 121 aa6.21□□□□□ -1.42
TMEM39A-207ENST00000482162 SMKR1H3BMG3 65 aa6.2□□□□□ -1.42
TMEM39A-207ENST00000482162 I3L3M4 83 aa6.2□□□□□ -1.42
TMEM39A-207ENST00000482162 UBE2L6O14933 153 aa6.2□□□□□ -1.42
TMEM39A-207ENST00000482162 TCAPO15273 167 aa6.2□□□□□ -1.42
TMEM39A-207ENST00000482162 TNFRSF6BO95407 300 aa6.2□□□□□ -1.42
TMEM39A-207ENST00000482162 OXTP01178 125 aa6.2□□□□□ -1.42
TMEM39A-207ENST00000482162 FGF6P10767 208 aa6.2□□□□□ -1.42
TMEM39A-207ENST00000482162 PMCHP20382 165 aa6.2□□□□□ -1.42
TMEM39A-207ENST00000482162 ST20Q9HBF5 79 aa6.2□□□□□ -1.42
TMEM39A-207ENST00000482162 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
TMEM39A-207ENST00000482162 TRBV27A0A0K0K1C4 114 aa6.19□□□□□ -1.42
TMEM39A-207ENST00000482162 hDV102S1A0JD36 115 aa6.19□□□□□ -1.42
TMEM39A-207ENST00000482162 TSHBP01222 138 aa6.19□□□□□ -1.42
TMEM39A-207ENST00000482162 NPYP01303 97 aa6.19□□□□□ -1.42
TMEM39A-207ENST00000482162 ZNF25P17030 456 aaPredicted RBP6.19□□□□□ -1.42
TMEM39A-207ENST00000482162 SUMO2P61956 95 aaKnown RBP6.19□□□□□ -1.42
TMEM39A-207ENST00000482162 RPL32P62910 135 aaKnown RBP6.19□□□□□ -1.42
TMEM39A-207ENST00000482162 NRACQ8N912 160 aa6.19□□□□□ -1.42
TMEM39A-207ENST00000482162 NXT2Q9NPJ8 142 aaKnown RBP6.19□□□□□ -1.42
TMEM39A-207ENST00000482162 IGHV3-64A0A075B6Q5 118 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 GVQW2A0A096LPI5 108 aaPredicted RBP6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 GAGE12HA6NDE8 117 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 PRSS47A8MTI9 375 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 K7EMI3 77 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST1H2BKO60814 126 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST1H2BJP06899 126 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST1H2BOP23527 126 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST1H2BBP33778 126 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HNRNPA3P51991 378 aaKnown RBP6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST1H2BDP58876 126 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST1H2BCP62807 126 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 FOXI1Q12951 378 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST2H2BEQ16778 126 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 MRPL52Q86TS9 123 aaKnown RBP6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 BAGE3Q86Y29 109 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 OR5A1Q8NGJ0 315 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 PRSS3P2Q8NHM4 247 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 C18orf32Q8TCD1 76 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 CHCHD10Q8WYQ3 142 aaPredicted RBP6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST1H2BHQ93079 126 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST1H2BNQ99877 126 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 HIST1H2BMQ99879 126 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 SMIM2Q9BVW6 85 aa6.18□□□□□ -1.42
TMEM39A-207ENST00000482162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.17□□□□□ -1.42
TMEM39A-207ENST00000482162 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms