RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 ESDP10768 282 aa8.83□□□□□ -1
HDAC6-224ENST00000481929 RPL35P42766 123 aaKnown RBP8.83□□□□□ -1
HDAC6-224ENST00000481929 UBE2BP63146 152 aa8.83□□□□□ -1
HDAC6-224ENST00000481929 LINC00299Q6ZSB3 139 aa8.83□□□□□ -1
HDAC6-224ENST00000481929 CDIP1Q9H305 208 aa8.83□□□□□ -1
HDAC6-224ENST00000481929 CDC42SE2Q9NRR3 84 aa8.83□□□□□ -1
HDAC6-224ENST00000481929 MUC17Q685J3 4493 aa8.83□□□□□ -1
HDAC6-224ENST00000481929 PMCHP20382 165 aa8.82□□□□□ -1
HDAC6-224ENST00000481929 IFITM3Q01628 133 aa8.82□□□□□ -1
HDAC6-224ENST00000481929 MRAP2Q96G30 205 aa8.82□□□□□ -1
HDAC6-224ENST00000481929 A0A1B0GV50 99 aa8.81□□□□□ -1
HDAC6-224ENST00000481929 C1orf196B1AJZ1 125 aa8.81□□□□□ -1
HDAC6-224ENST00000481929 I3L3M4 83 aa8.81□□□□□ -1
HDAC6-224ENST00000481929 SPAG11BQ08648 103 aa8.81□□□□□ -1
HDAC6-224ENST00000481929 TWIST1Q15672 202 aa8.81□□□□□ -1
HDAC6-224ENST00000481929 MRPL52Q86TS9 123 aaKnown RBP8.81□□□□□ -1
HDAC6-224ENST00000481929 IMMP2LQ96T52 175 aa8.81□□□□□ -1
HDAC6-224ENST00000481929 RPP21Q9H633 154 aaKnown RBP8.81□□□□□ -1
HDAC6-224ENST00000481929 G3V3Q6 166 aa8.8□□□□□ -1
HDAC6-224ENST00000481929 CTRLP40313 264 aa8.8□□□□□ -1
HDAC6-224ENST00000481929 Q5BKY6 102 aa8.8□□□□□ -1
HDAC6-224ENST00000481929 CENPWQ5EE01 88 aa8.8□□□□□ -1
HDAC6-224ENST00000481929 SFT2D1Q8WV19 159 aa8.8□□□□□ -1
HDAC6-224ENST00000481929 FXYD6-FXYD2A0A087WZ82 144 aa8.79□□□□□ -1
HDAC6-224ENST00000481929 M0QXV9 152 aa8.79□□□□□ -1
HDAC6-224ENST00000481929 TEX261Q6UWH6 196 aa8.79□□□□□ -1
HDAC6-224ENST00000481929 C9orf62Q8N4C0 152 aa8.79□□□□□ -1
HDAC6-224ENST00000481929 MRPL35Q9NZE8 188 aaKnown RBP8.79□□□□□ -1
HDAC6-224ENST00000481929 TPRXLQ17RH7 258 aa8.78□□□□□ -1
HDAC6-224ENST00000481929 C5orf38Q86SI9 138 aa8.78□□□□□ -1
HDAC6-224ENST00000481929 KCNRGQ8N5I3 272 aa8.78□□□□□ -1
HDAC6-224ENST00000481929 RETNLBQ9BQ08 111 aa8.78□□□□□ -1
HDAC6-224ENST00000481929 TMEM242Q9NWH2 141 aa8.78□□□□□ -1
HDAC6-224ENST00000481929 ALG5Q9Y673 324 aa8.78□□□□□ -1
HDAC6-224ENST00000481929 ZNF861PO60384 105 aa8.77□□□□□ -1.01
HDAC6-224ENST00000481929 TSHBP01222 138 aa8.77□□□□□ -1.01
HDAC6-224ENST00000481929 LINC01547P58512 204 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-224ENST00000481929 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
HDAC6-224ENST00000481929 TYMSOSQ8TAI1 123 aa8.77□□□□□ -1.01
HDAC6-224ENST00000481929 MBD3L1Q8WWY6 194 aa8.77□□□□□ -1.01
HDAC6-224ENST00000481929 CNFNQ9BYD5 112 aa8.77□□□□□ -1.01
HDAC6-224ENST00000481929 TLX1NBP0CAT3 122 aa8.76□□□□□ -1.01
HDAC6-224ENST00000481929 GAGE2EQ4V326 116 aa8.76□□□□□ -1.01
HDAC6-224ENST00000481929 OR10D4PQ8NGN7 298 aa8.76□□□□□ -1.01
HDAC6-224ENST00000481929 FAM213BQ8TBF2 198 aa8.76□□□□□ -1.01
HDAC6-224ENST00000481929 C11orf52Q96A22 123 aa8.76□□□□□ -1.01
HDAC6-224ENST00000481929 FAM210AQ96ND0 272 aa8.76□□□□□ -1.01
HDAC6-224ENST00000481929 GAGE2DQ9UEU5 116 aa8.76□□□□□ -1.01
HDAC6-224ENST00000481929 A0A087X002 238 aa8.75□□□□□ -1.01
HDAC6-224ENST00000481929 TRAV13-1A0A0B4J241 112 aa8.75□□□□□ -1.01
HDAC6-224ENST00000481929 TRBV6-5A0A0K0K1A5 114 aa8.75□□□□□ -1.01
HDAC6-224ENST00000481929 C7orf77A4D0Y5 90 aa8.75□□□□□ -1.01
HDAC6-224ENST00000481929 F8WDY8 70 aa8.75□□□□□ -1.01
HDAC6-224ENST00000481929 NDUFA1O15239 70 aa8.75□□□□□ -1.01
HDAC6-224ENST00000481929 SMIM12Q96EX1 92 aa8.75□□□□□ -1.01
HDAC6-224ENST00000481929 GIPP09681 153 aaPredicted RBP8.74□□□□□ -1.01
HDAC6-224ENST00000481929 CRYGAP11844 174 aa8.74□□□□□ -1.01
HDAC6-224ENST00000481929 GNG4P50150 75 aa8.74□□□□□ -1.01
HDAC6-224ENST00000481929 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
HDAC6-224ENST00000481929 FOXA3P55318 350 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-224ENST00000481929 RNASE13Q5GAN3 156 aaKnown RBP8.73□□□□□ -1.01
HDAC6-224ENST00000481929 ORAOV1Q8WV07 137 aa8.73□□□□□ -1.01
HDAC6-224ENST00000481929 SMDT1Q9H4I9 107 aa8.73□□□□□ -1.01
HDAC6-224ENST00000481929 ST20Q9HBF5 79 aa8.73□□□□□ -1.01
HDAC6-224ENST00000481929 BIN3Q9NQY0 253 aa8.73□□□□□ -1.01
HDAC6-224ENST00000481929 CYTL1Q9NRR1 136 aa8.73□□□□□ -1.01
HDAC6-224ENST00000481929 IGLV7-46A0A075B6I9 117 aa8.72□□□□□ -1.01
HDAC6-224ENST00000481929 SMAGPQ0VAQ4 97 aa8.72□□□□□ -1.01
HDAC6-224ENST00000481929 TMEM241Q24JQ0 296 aa8.72□□□□□ -1.01
HDAC6-224ENST00000481929 C10orf25Q5T742 122 aa8.72□□□□□ -1.01
HDAC6-224ENST00000481929 RNASE7Q9H1E1 156 aaKnown RBP8.72□□□□□ -1.01
HDAC6-224ENST00000481929 RAB19A4D1S5 217 aa8.71□□□□□ -1.02
HDAC6-224ENST00000481929 CCL20P78556 96 aa8.71□□□□□ -1.02
HDAC6-224ENST00000481929 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
HDAC6-224ENST00000481929 C6orf48Q9UBA6 75 aa8.71□□□□□ -1.02
HDAC6-224ENST00000481929 CSDC2Q9Y534 153 aaKnown RBP8.71□□□□□ -1.02
HDAC6-224ENST00000481929 UMAD1C9J7I0 102 aa8.7□□□□□ -1.02
HDAC6-224ENST00000481929 H2AFB1P0C5Y9 115 aa8.7□□□□□ -1.02
HDAC6-224ENST00000481929 SRSF3P84103 164 aaKnown RBP8.7□□□□□ -1.02
HDAC6-224ENST00000481929 NUDT10Q8NFP7 164 aa8.7□□□□□ -1.02
HDAC6-224ENST00000481929 NUDT11Q96G61 164 aa8.7□□□□□ -1.02
HDAC6-224ENST00000481929 MANBALQ9NQG1 85 aa8.7□□□□□ -1.02
HDAC6-224ENST00000481929 NUPR1O60356 82 aa8.69□□□□□ -1.02
HDAC6-224ENST00000481929 LINC00173Q6ZV60 143 aa8.69□□□□□ -1.02
HDAC6-224ENST00000481929 GNG13Q9P2W3 67 aa8.69□□□□□ -1.02
HDAC6-224ENST00000481929 UBE2D4Q9Y2X8 147 aa8.69□□□□□ -1.02
HDAC6-224ENST00000481929 TRBV27A0A0K0K1C4 114 aa8.68□□□□□ -1.02
HDAC6-224ENST00000481929 FCER1GP30273 86 aa8.68□□□□□ -1.02
HDAC6-224ENST00000481929 POLR2KP53803 58 aaKnown RBP8.68□□□□□ -1.02
HDAC6-224ENST00000481929 Q6ZUT4 128 aa8.68□□□□□ -1.02
HDAC6-224ENST00000481929 TRBV20OR9-2A0A075B6H5 130 aa8.67□□□□□ -1.02
HDAC6-224ENST00000481929 ARPC5O15511 151 aa8.67□□□□□ -1.02
HDAC6-224ENST00000481929 LINC00304Q8N9R0 145 aa8.67□□□□□ -1.02
HDAC6-224ENST00000481929 CTDSP1Q9GZU7 261 aa8.67□□□□□ -1.02
HDAC6-224ENST00000481929 RPL28P46779 137 aaKnown RBP8.66□□□□□ -1.02
HDAC6-224ENST00000481929 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
HDAC6-224ENST00000481929 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
HDAC6-224ENST00000481929 NDUFC2-KCTD14E9PQ53 114 aa8.64□□□□□ -1.03
HDAC6-224ENST00000481929 PPDPFQ9H3Y8 114 aa8.64□□□□□ -1.03
HDAC6-224ENST00000481929 MED9Q9NWA0 146 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms