RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 SMIM2Q9BVW6 85 aa7.7□□□□□ -1.18
GARNL3-217ENST00000481875 TRBV25-1A0A075B6N4 114 aa7.69□□□□□ -1.18
GARNL3-217ENST00000481875 IGLV5-52A0A0A0MRZ9 124 aa7.69□□□□□ -1.18
GARNL3-217ENST00000481875 IGHV1-24A0A0C4DH33 117 aa7.69□□□□□ -1.18
GARNL3-217ENST00000481875 AMTP48728 403 aa7.69□□□□□ -1.18
GARNL3-217ENST00000481875 RPL32P62910 135 aaKnown RBP7.69□□□□□ -1.18
GARNL3-217ENST00000481875 NTM-AS1Q6ZSK4 140 aa7.69□□□□□ -1.18
GARNL3-217ENST00000481875 Q8N814 137 aa7.69□□□□□ -1.18
GARNL3-217ENST00000481875 PRSS3P2Q8NHM4 247 aa7.69□□□□□ -1.18
GARNL3-217ENST00000481875 CHCHD5Q9BSY4 110 aa7.69□□□□□ -1.18
GARNL3-217ENST00000481875 PRSS47A8MTI9 375 aa7.68□□□□□ -1.18
GARNL3-217ENST00000481875 TMEM262E9PQX1 116 aa7.68□□□□□ -1.18
GARNL3-217ENST00000481875 PSCAO43653 123 aa7.68□□□□□ -1.18
GARNL3-217ENST00000481875 Q6ZSA8 131 aa7.68□□□□□ -1.18
GARNL3-217ENST00000481875 Q8N8P6 123 aa7.68□□□□□ -1.18
GARNL3-217ENST00000481875 TMEM243Q9BU79 118 aa7.68□□□□□ -1.18
GARNL3-217ENST00000481875 NXT2Q9NPJ8 142 aaKnown RBP7.68□□□□□ -1.18
GARNL3-217ENST00000481875 UBE2L6O14933 153 aa7.67□□□□□ -1.18
GARNL3-217ENST00000481875 TCAPO15273 167 aa7.67□□□□□ -1.18
GARNL3-217ENST00000481875 TSHBP01222 138 aa7.67□□□□□ -1.18
GARNL3-217ENST00000481875 SMR3BP02814 79 aaPredicted RBP7.67□□□□□ -1.18
GARNL3-217ENST00000481875 IQCJQ1A5X6 159 aa7.67□□□□□ -1.18
GARNL3-217ENST00000481875 TM2D2Q9BX73 214 aa7.67□□□□□ -1.18
GARNL3-217ENST00000481875 DNAH8Q96JB1 4490 aa7.67□□□□□ -1.18
GARNL3-217ENST00000481875 IFI27P40305 119 aaPredicted RBP7.66□□□□□ -1.18
GARNL3-217ENST00000481875 GAGE6Q13070 117 aa7.66□□□□□ -1.18
GARNL3-217ENST00000481875 FA2HQ7L5A8 372 aa7.66□□□□□ -1.18
GARNL3-217ENST00000481875 A0A087WX48 190 aa7.65□□□□□ -1.18
GARNL3-217ENST00000481875 PKIAP61925 76 aa7.65□□□□□ -1.18
GARNL3-217ENST00000481875 C18orf32Q8TCD1 76 aa7.65□□□□□ -1.18
GARNL3-217ENST00000481875 FAM30AQ9NZY2 134 aa7.65□□□□□ -1.18
GARNL3-217ENST00000481875 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.64□□□□□ -1.19
GARNL3-217ENST00000481875 TRAV8-3A0A0A6YYJ7 113 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 IGKV2-29A2NJV5 120 aaPredicted RBP7.64□□□□□ -1.19
GARNL3-217ENST00000481875 IGHV3-30P01768 117 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 IGHV3-33P01772 117 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 IGHV3-30-3P0DP02 117 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 IGHV3-30-5P0DP03 117 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 RAB5BP61020 215 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 AMMECR1LQ6DCA0 310 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 NIT1Q86X76 327 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 BAGE3Q86Y29 109 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 TMEM18Q96B42 140 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 CHCHD7Q9BUK0 85 aa7.64□□□□□ -1.19
GARNL3-217ENST00000481875 KRTAP29-1A8MX34 341 aaPredicted RBP7.63□□□□□ -1.19
GARNL3-217ENST00000481875 H7C423 109 aa7.63□□□□□ -1.19
GARNL3-217ENST00000481875 K7EMI3 77 aa7.63□□□□□ -1.19
GARNL3-217ENST00000481875 ESDP10768 282 aa7.63□□□□□ -1.19
GARNL3-217ENST00000481875 ORMDL2Q53FV1 153 aa7.63□□□□□ -1.19
GARNL3-217ENST00000481875 RNASEKQ6P5S7 137 aaKnown RBP7.63□□□□□ -1.19
GARNL3-217ENST00000481875 COX11Q9Y6N1 276 aa7.63□□□□□ -1.19
GARNL3-217ENST00000481875 C1orf196B1AJZ1 125 aa7.62□□□□□ -1.19
GARNL3-217ENST00000481875 PLA2G1BP04054 148 aaKnown RBP7.62□□□□□ -1.19
GARNL3-217ENST00000481875 LINC00614P0C842 121 aa7.62□□□□□ -1.19
GARNL3-217ENST00000481875 G0S2P27469 103 aa7.62□□□□□ -1.19
GARNL3-217ENST00000481875 SMAGPQ0VAQ4 97 aa7.62□□□□□ -1.19
GARNL3-217ENST00000481875 DGAT2L7PQ6IED9 249 aa7.62□□□□□ -1.19
GARNL3-217ENST00000481875 C20orf203Q8NBC4 194 aa7.62□□□□□ -1.19
GARNL3-217ENST00000481875 Q9HAA7 133 aa7.62□□□□□ -1.19
GARNL3-217ENST00000481875 FGF6P10767 208 aa7.61□□□□□ -1.19
GARNL3-217ENST00000481875 RBX1P62877 108 aa7.61□□□□□ -1.19
GARNL3-217ENST00000481875 Q0VG73 95 aa7.61□□□□□ -1.19
GARNL3-217ENST00000481875 MPV17L2Q567V2 206 aa7.61□□□□□ -1.19
GARNL3-217ENST00000481875 Q8N3U1 123 aa7.61□□□□□ -1.19
GARNL3-217ENST00000481875 TMEM101Q96IK0 257 aa7.61□□□□□ -1.19
GARNL3-217ENST00000481875 A0A1B0GUV1 79 aa7.6□□□□□ -1.19
GARNL3-217ENST00000481875 LINC01546A6NGU7 62 aa7.6□□□□□ -1.19
GARNL3-217ENST00000481875 ANGP03950 147 aaKnown RBP7.6□□□□□ -1.19
GARNL3-217ENST00000481875 RPL39P62891 51 aaKnown RBP7.6□□□□□ -1.19
GARNL3-217ENST00000481875 Q8N976 141 aa7.6□□□□□ -1.19
GARNL3-217ENST00000481875 OR5A1Q8NGJ0 315 aa7.6□□□□□ -1.19
GARNL3-217ENST00000481875 KLK12Q9UKR0 248 aa7.6□□□□□ -1.19
GARNL3-217ENST00000481875 CYSLTR1Q9Y271 337 aa7.6□□□□□ -1.19
GARNL3-217ENST00000481875 HIST1H2BKO60814 126 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HIST1H2BJP06899 126 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 ZNF25P17030 456 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HIST1H2BOP23527 126 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HIST1H2BBP33778 126 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HIST1H2BDP58876 126 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HIST1H2BCP62807 126 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HAMPP81172 84 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 WFDC2Q14508 124 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HIST2H2BEQ16778 126 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.59□□□□□ -1.19
GARNL3-217ENST00000481875 C2orf66Q6UXQ4 117 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HIST1H2BHQ93079 126 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 CHCHD1Q96BP2 118 aaKnown RBP7.59□□□□□ -1.19
GARNL3-217ENST00000481875 URB1-AS1Q96HZ7 61 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HIST1H2BNQ99877 126 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 HIST1H2BMQ99879 126 aa7.59□□□□□ -1.19
GARNL3-217ENST00000481875 IGLV4-60A0A075B6I1 120 aa7.58□□□□□ -1.2
GARNL3-217ENST00000481875 MRPL52Q86TS9 123 aaKnown RBP7.58□□□□□ -1.2
GARNL3-217ENST00000481875 TIMM21Q9BVV7 248 aa7.58□□□□□ -1.2
GARNL3-217ENST00000481875 SPANXA1Q9NS26 97 aa7.58□□□□□ -1.2
GARNL3-217ENST00000481875 LINC01549A6NIU2 74 aa7.57□□□□□ -1.2
GARNL3-217ENST00000481875 HSBP1O75506 76 aa7.57□□□□□ -1.2
GARNL3-217ENST00000481875 SERF1AO75920 110 aa7.57□□□□□ -1.2
GARNL3-217ENST00000481875 NDUFA6P56556 154 aa7.57□□□□□ -1.2
GARNL3-217ENST00000481875 UBE2WQ96B02 151 aa7.57□□□□□ -1.2
GARNL3-217ENST00000481875 TOMM6Q96B49 74 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms