RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 ODF1Q14990 250 aa2.66□□□□□ -1.98
VPS13D-208ENST00000481484 TWIST1Q15672 202 aa2.66□□□□□ -1.98
VPS13D-208ENST00000481484 KRTAP26-1Q6PEX3 210 aa2.66□□□□□ -1.98
VPS13D-208ENST00000481484 LYZL1Q6UWQ5 148 aa2.66□□□□□ -1.98
VPS13D-208ENST00000481484 MRAP2Q96G30 205 aa2.66□□□□□ -1.98
VPS13D-208ENST00000481484 TMEM101Q96IK0 257 aa2.66□□□□□ -1.98
VPS13D-208ENST00000481484 BTF3L4Q96K17 158 aa2.66□□□□□ -1.98
VPS13D-208ENST00000481484 GFRA4Q9GZZ7 299 aa2.66□□□□□ -1.98
VPS13D-208ENST00000481484 TNXBP22105 4242 aa2.66□□□□□ -1.98
VPS13D-208ENST00000481484 IGHV1-58A0A0C4DH39 117 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 TRBV6-5A0A0K0K1A5 114 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 C7orf77A4D0Y5 90 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 SDHAF1A6NFY7 115 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 PPP1R2P9O14990 202 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 RPS10P46783 165 aaKnown RBP2.65□□□□□ -1.99
VPS13D-208ENST00000481484 LINC01620Q4KN68 170 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 SDIM1Q6ZPB5 146 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 MRPL52Q86TS9 123 aaKnown RBP2.65□□□□□ -1.99
VPS13D-208ENST00000481484 AKAP14Q86UN6 197 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 C15orf56Q8N910 161 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 OR5A1Q8NGJ0 315 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 ISOC2Q96AB3 205 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 PLAC8Q9NZF1 115 aa2.65□□□□□ -1.99
VPS13D-208ENST00000481484 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 IGLV4-60A0A075B6I1 120 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 TRBV27A0A0K0K1C4 114 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 A0A1B0GUT8 65 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 A0A1B0GW15 77 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 RAB19A4D1S5 217 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 I3L3M4 83 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 K7EN84 100 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 GATCO43716 136 aaKnown RBP2.64□□□□□ -1.99
VPS13D-208ENST00000481484 S100A8P05109 93 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 FGF6P10767 208 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 FAM74A3Q4VXF1 159 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 RNASEKQ6P5S7 137 aaKnown RBP2.64□□□□□ -1.99
VPS13D-208ENST00000481484 GATD1Q8NB37 220 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 LYPD6BQ8NI32 183 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 TSKUQ8WUA8 353 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 CHCHD10Q8WYQ3 142 aaPredicted RBP2.64□□□□□ -1.99
VPS13D-208ENST00000481484 TMEM18Q96B42 140 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 CARD19Q96LW7 228 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 SMIM7Q9BQ49 75 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 TMEM191AQ9H0A3 160 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 ST20Q9HBF5 79 aa2.64□□□□□ -1.99
VPS13D-208ENST00000481484 LRP2P98164 4655 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 A0A087WYN8 130 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 TRAV26-2A0A0B4J265 109 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 HIGD1CA8MV81 97 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 F8WDY8 70 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 TRIAP1O43715 76 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 APOMO95445 188 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 FOXA3P55318 350 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-208ENST00000481484 SSTP61278 116 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 RPL32P62910 135 aaKnown RBP2.63□□□□□ -1.99
VPS13D-208ENST00000481484 PRR3P79522 188 aaKnown RBP2.63□□□□□ -1.99
VPS13D-208ENST00000481484 SS18Q15532 418 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 REG3GQ6UW15 175 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 CD164L2Q6UWJ8 174 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 LINC01551Q86U37 167 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 GTSF1Q8WW33 167 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 KIR2DL4Q99706 377 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 RNASE7Q9H1E1 156 aaKnown RBP2.63□□□□□ -1.99
VPS13D-208ENST00000481484 OSTCQ9NRP0 149 aa2.63□□□□□ -1.99
VPS13D-208ENST00000481484 CSDC2Q9Y534 153 aaKnown RBP2.63□□□□□ -1.99
VPS13D-208ENST00000481484 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.62□□□□□ -1.99
VPS13D-208ENST00000481484 LOC107984640A0A0U1RRK4 108 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 IGKV2-29A2NJV5 120 aaPredicted RBP2.62□□□□□ -1.99
VPS13D-208ENST00000481484 ZNF727A8MUV8 499 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 C1orf196B1AJZ1 125 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 COX7A2LO14548 114 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 PHOX2AO14813 284 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 TSHBP01222 138 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 ESDP10768 282 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 PMCHP20382 165 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 FCER1GP30273 86 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 CAMPP49913 170 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 SUMO2P61956 95 aaKnown RBP2.62□□□□□ -1.99
VPS13D-208ENST00000481484 COX6A2Q02221 97 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 RIGQ13278 110 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 MAJINQ3KP22 176 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 HIGD2BQ4VC39 106 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 ALKAL2Q6UX46 152 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 OR10D4PQ8NGN7 298 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 OCC1Q8TAD7 63 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 RPL39LQ96EH5 51 aaKnown RBP2.62□□□□□ -1.99
VPS13D-208ENST00000481484 TIMM21Q9BVV7 248 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 SMDT1Q9H4I9 107 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 SPANXA1Q9NS26 97 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 TMEM242Q9NWH2 141 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 NAT8BQ9UHF3 227 aa2.62□□□□□ -1.99
VPS13D-208ENST00000481484 IGLV4-69A0A075B6H9 119 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 IGKV2-24A0A0C4DH68 120 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 IGKV3OR2-268A0A0C4DH90 116 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 LINC00959A0A1B0GUT2 108 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 LINC00862A6NCI5 91 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 PANO1I0J062 215 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 VCYO14598 125 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 CHTF8P0CG12 524 aa2.61□□□□□ -1.99
VPS13D-208ENST00000481484 XCL1P47992 114 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms