RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
PTPRF-213ENST00000481019 H7C423 109 aa8.27□□□□□ -1.09
PTPRF-213ENST00000481019 NPSP0C0P6 89 aa8.27□□□□□ -1.09
PTPRF-213ENST00000481019 DNAH10OSP0CZ25 163 aa8.27□□□□□ -1.09
PTPRF-213ENST00000481019 TTC32Q5I0X7 151 aa8.27□□□□□ -1.09
PTPRF-213ENST00000481019 OR10D4PQ8NGN7 298 aa8.27□□□□□ -1.09
PTPRF-213ENST00000481019 TOMM6Q96B49 74 aa8.27□□□□□ -1.09
PTPRF-213ENST00000481019 LOC105371267A0A1B0GV96 52 aa8.26□□□□□ -1.09
PTPRF-213ENST00000481019 C20orf202A1L168 122 aa8.26□□□□□ -1.09
PTPRF-213ENST00000481019 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.26□□□□□ -1.09
PTPRF-213ENST00000481019 TSHBP01222 138 aa8.26□□□□□ -1.09
PTPRF-213ENST00000481019 PKIAP61925 76 aa8.26□□□□□ -1.09
PTPRF-213ENST00000481019 LELP1Q5T871 98 aa8.26□□□□□ -1.09
PTPRF-213ENST00000481019 C2orf66Q6UXQ4 117 aa8.26□□□□□ -1.09
PTPRF-213ENST00000481019 TMEM141Q96I45 108 aa8.26□□□□□ -1.09
PTPRF-213ENST00000481019 DNAH8Q96JB1 4490 aa8.25□□□□□ -1.09
PTPRF-213ENST00000481019 TRBV25-1A0A075B6N4 114 aa8.25□□□□□ -1.09
PTPRF-213ENST00000481019 UBE2L6O14933 153 aa8.25□□□□□ -1.09
PTPRF-213ENST00000481019 Q6ZN92 141 aa8.25□□□□□ -1.09
PTPRF-213ENST00000481019 ERASQ7Z444 233 aa8.25□□□□□ -1.09
PTPRF-213ENST00000481019 C20orf203Q8NBC4 194 aa8.25□□□□□ -1.09
PTPRF-213ENST00000481019 SCGB3A1Q96QR1 104 aa8.25□□□□□ -1.09
PTPRF-213ENST00000481019 HSPG2P98160 4391 aa8.25□□□□□ -1.09
PTPRF-213ENST00000481019 IGHV3-38A0A0C4DH36 116 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 IGHV3-30P01768 117 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 IGHV3-33P01772 117 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 IGHV3-30-3P0DP02 117 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 IGHV3-30-5P0DP03 117 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 PMCHL1Q16048 86 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 PET117Q6UWS5 81 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 TIMM17AQ99595 171 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 PYGO1Q9Y3Y4 419 aa8.24□□□□□ -1.09
PTPRF-213ENST00000481019 TRBV6-8A0A0A6YYG3 113 aa8.23□□□□□ -1.09
PTPRF-213ENST00000481019 TRAV8-6A0A0B4J262 113 aa8.23□□□□□ -1.09
PTPRF-213ENST00000481019 IFITM10A6NMD0 228 aa8.23□□□□□ -1.09
PTPRF-213ENST00000481019 PRSS1P07477 247 aa8.23□□□□□ -1.09
PTPRF-213ENST00000481019 KRTDAPP60985 99 aa8.23□□□□□ -1.09
PTPRF-213ENST00000481019 LINC01556Q5JQF7 62 aa8.23□□□□□ -1.09
PTPRF-213ENST00000481019 DGAT2L7PQ6IED9 249 aa8.23□□□□□ -1.09
PTPRF-213ENST00000481019 SPATA12Q7Z6I5 190 aa8.23□□□□□ -1.09
PTPRF-213ENST00000481019 TMEM243Q9BU79 118 aa8.23□□□□□ -1.09
PTPRF-213ENST00000481019 TIMM21Q9BVV7 248 aa8.23□□□□□ -1.09
PTPRF-213ENST00000481019 JOSD1Q15040 202 aaPredicted RBP8.22□□□□□ -1.09
PTPRF-213ENST00000481019 TMEM101Q96IK0 257 aa8.22□□□□□ -1.09
PTPRF-213ENST00000481019 A0A096LNJ9 63 aa8.21□□□□□ -1.1
PTPRF-213ENST00000481019 SYS1-DBNDD2H3BUS1 97 aa8.21□□□□□ -1.1
PTPRF-213ENST00000481019 SCGB1D1O95968 90 aa8.21□□□□□ -1.1
PTPRF-213ENST00000481019 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.1
PTPRF-213ENST00000481019 FUSP35637 526 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTPRF-213ENST00000481019 AMMECR1LQ6DCA0 310 aa8.21□□□□□ -1.1
PTPRF-213ENST00000481019 NTM-AS1Q6ZSK4 140 aa8.21□□□□□ -1.1
PTPRF-213ENST00000481019 DEFB104AQ8WTQ1 72 aa8.21□□□□□ -1.1
PTPRF-213ENST00000481019 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.1
PTPRF-213ENST00000481019 IBA57-AS1B1ANH7 110 aa8.2□□□□□ -1.1
PTPRF-213ENST00000481019 C3orf79P0CE67 100 aa8.2□□□□□ -1.1
PTPRF-213ENST00000481019 SMIM6P0DI80 62 aa8.2□□□□□ -1.1
PTPRF-213ENST00000481019 KRTAP10-2P60368 255 aa8.2□□□□□ -1.1
PTPRF-213ENST00000481019 CHCHD7Q9BUK0 85 aa8.2□□□□□ -1.1
PTPRF-213ENST00000481019 VCX2Q9H322 139 aa8.2□□□□□ -1.1
PTPRF-213ENST00000481019 TRAV9-2A0A087WT02 112 aa8.19□□□□□ -1.1
PTPRF-213ENST00000481019 TRAV12-1A0A0B4J245 112 aa8.19□□□□□ -1.1
PTPRF-213ENST00000481019 IGIPA6NJ69 53 aa8.19□□□□□ -1.1
PTPRF-213ENST00000481019 S100A12P80511 92 aa8.19□□□□□ -1.1
PTPRF-213ENST00000481019 MRPS36P82909 103 aaKnown RBP8.19□□□□□ -1.1
PTPRF-213ENST00000481019 MRPL52Q86TS9 123 aaKnown RBP8.19□□□□□ -1.1
PTPRF-213ENST00000481019 CHCHD5Q9BSY4 110 aa8.19□□□□□ -1.1
PTPRF-213ENST00000481019 PMVKQ15126 192 aa8.18□□□□□ -1.1
PTPRF-213ENST00000481019 OR5A1Q8NGJ0 315 aa8.18□□□□□ -1.1
PTPRF-213ENST00000481019 C2orf88Q9BSF0 95 aa8.18□□□□□ -1.1
PTPRF-213ENST00000481019 Q9HAA7 133 aa8.18□□□□□ -1.1
PTPRF-213ENST00000481019 A0A1B0GUV1 79 aa8.17□□□□□ -1.1
PTPRF-213ENST00000481019 FGF6P10767 208 aa8.17□□□□□ -1.1
PTPRF-213ENST00000481019 RPL39P62891 51 aaKnown RBP8.17□□□□□ -1.1
PTPRF-213ENST00000481019 TEX43Q6ZNM6 134 aa8.17□□□□□ -1.1
PTPRF-213ENST00000481019 C10orf126Q8N4M7 172 aa8.17□□□□□ -1.1
PTPRF-213ENST00000481019 UBE2D4Q9Y2X8 147 aa8.17□□□□□ -1.1
PTPRF-213ENST00000481019 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.16□□□□□ -1.1
PTPRF-213ENST00000481019 A0A087WX48 190 aa8.16□□□□□ -1.1
PTPRF-213ENST00000481019 IGKV2-29A2NJV5 120 aaPredicted RBP8.16□□□□□ -1.1
PTPRF-213ENST00000481019 HSBP1L1C9JCN9 74 aa8.16□□□□□ -1.1
PTPRF-213ENST00000481019 TMEM262E9PQX1 116 aa8.16□□□□□ -1.1
PTPRF-213ENST00000481019 K7EP13 123 aa8.16□□□□□ -1.1
PTPRF-213ENST00000481019 SEC11AP67812 179 aa8.16□□□□□ -1.1
PTPRF-213ENST00000481019 LINC01545Q5VT33 79 aa8.16□□□□□ -1.1
PTPRF-213ENST00000481019 ABCA13Q86UQ4 5058 aa8.15□□□□□ -1.1
PTPRF-213ENST00000481019 A0A087WTM6 91 aa8.15□□□□□ -1.1
PTPRF-213ENST00000481019 H0Y8G0 127 aa8.15□□□□□ -1.1
PTPRF-213ENST00000481019 PLNP26678 52 aa8.15□□□□□ -1.1
PTPRF-213ENST00000481019 MPV17L2Q567V2 206 aa8.15□□□□□ -1.1
PTPRF-213ENST00000481019 LINC00173Q6ZV60 143 aa8.15□□□□□ -1.1
PTPRF-213ENST00000481019 NFE4Q86UQ8 179 aa8.15□□□□□ -1.1
PTPRF-213ENST00000481019 BAALCQ8WXS3 180 aa8.15□□□□□ -1.1
PTPRF-213ENST00000481019 CHTOPQ9Y3Y2 248 aaKnown RBP8.15□□□□□ -1.1
PTPRF-213ENST00000481019 IGLV4-3A0A075B6K6 122 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 LRCOL1A6NCL2 159 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 F8VRH5 84 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 CCL25O15444 150 aa8.14□□□□□ -1.11
PTPRF-213ENST00000481019 DPM2O94777 84 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms