RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 DNAH10Q8IVF4 4471 aa8.28□□□□□ -1.08
SHROOM3-205ENST00000481002 DNAH17Q9UFH2 4485 aa8.27□□□□□ -1.08
SHROOM3-205ENST00000481002 CRPP02741 224 aa8.27□□□□□ -1.09
SHROOM3-205ENST00000481002 MIAQ16674 131 aa8.27□□□□□ -1.09
SHROOM3-205ENST00000481002 ZNF664Q8N3J9 261 aa8.27□□□□□ -1.09
SHROOM3-205ENST00000481002 FAM104AQ969W3 186 aa8.27□□□□□ -1.09
SHROOM3-205ENST00000481002 AP5S1Q9NUS5 200 aa8.27□□□□□ -1.09
SHROOM3-205ENST00000481002 CYSLTR1Q9Y271 337 aa8.27□□□□□ -1.09
SHROOM3-205ENST00000481002 FRAS1Q86XX4 4008 aa8.27□□□□□ -1.09
SHROOM3-205ENST00000481002 TRAV8-4A0A0B4J246 113 aa8.26□□□□□ -1.09
SHROOM3-205ENST00000481002 MRPS36P82909 103 aaKnown RBP8.26□□□□□ -1.09
SHROOM3-205ENST00000481002 CLPSL2Q6UWE3 100 aa8.26□□□□□ -1.09
SHROOM3-205ENST00000481002 LINC00336Q6ZUF6 198 aa8.26□□□□□ -1.09
SHROOM3-205ENST00000481002 TOMM6Q96B49 74 aa8.26□□□□□ -1.09
SHROOM3-205ENST00000481002 RMI2Q96E14 147 aa8.26□□□□□ -1.09
SHROOM3-205ENST00000481002 TM2D2Q9BX73 214 aa8.26□□□□□ -1.09
SHROOM3-205ENST00000481002 COX11Q9Y6N1 276 aa8.26□□□□□ -1.09
SHROOM3-205ENST00000481002 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
SHROOM3-205ENST00000481002 CHCHD1Q96BP2 118 aaKnown RBP8.25□□□□□ -1.09
SHROOM3-205ENST00000481002 IGKV2D-24A0A075B6R9 120 aa8.24□□□□□ -1.09
SHROOM3-205ENST00000481002 IGIPA6NJ69 53 aa8.24□□□□□ -1.09
SHROOM3-205ENST00000481002 NPSP0C0P6 89 aa8.24□□□□□ -1.09
SHROOM3-205ENST00000481002 KRTAP26-1Q6PEX3 210 aa8.24□□□□□ -1.09
SHROOM3-205ENST00000481002 Q6ZUT4 128 aa8.24□□□□□ -1.09
SHROOM3-205ENST00000481002 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
SHROOM3-205ENST00000481002 C1orf43Q9BWL3 253 aa8.24□□□□□ -1.09
SHROOM3-205ENST00000481002 IGLV4-3A0A075B6K6 122 aa8.23□□□□□ -1.09
SHROOM3-205ENST00000481002 A0A096LNJ9 63 aa8.23□□□□□ -1.09
SHROOM3-205ENST00000481002 LINC00959A0A1B0GUT2 108 aa8.23□□□□□ -1.09
SHROOM3-205ENST00000481002 PRSS29PA6NIE9 313 aa8.23□□□□□ -1.09
SHROOM3-205ENST00000481002 ERASQ7Z444 233 aa8.23□□□□□ -1.09
SHROOM3-205ENST00000481002 BAGE3Q86Y29 109 aa8.23□□□□□ -1.09
SHROOM3-205ENST00000481002 MAPKAPK5-AS1Q8N8E1 139 aa8.23□□□□□ -1.09
SHROOM3-205ENST00000481002 TIMM17AQ99595 171 aa8.23□□□□□ -1.09
SHROOM3-205ENST00000481002 IGKV3OR2-268A0A0C4DH90 116 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 CCL25O15444 150 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 PSCAO43653 123 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST1H2BKO60814 126 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST1H2BJP06899 126 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST1H2BOP23527 126 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST1H2BBP33778 126 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST1H2BDP58876 126 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST1H2BCP62807 126 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 TNP2Q05952 138 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST2H2BEQ16778 126 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 RNASE13Q5GAN3 156 aaKnown RBP8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST1H2BHQ93079 126 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 TMEM141Q96I45 108 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 SCGB3A1Q96QR1 104 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST1H2BNQ99877 126 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 HIST1H2BMQ99879 126 aa8.22□□□□□ -1.09
SHROOM3-205ENST00000481002 IGLV10-54A0A075B6I4 117 aa8.21□□□□□ -1.1
SHROOM3-205ENST00000481002 HBDP02042 147 aa8.21□□□□□ -1.1
SHROOM3-205ENST00000481002 LINC00310P59036 64 aa8.21□□□□□ -1.1
SHROOM3-205ENST00000481002 AMELXQ99217 191 aa8.21□□□□□ -1.1
SHROOM3-205ENST00000481002 FAT2Q9NYQ8 4349 aa8.2□□□□□ -1.1
SHROOM3-205ENST00000481002 LRCOL1A6NCL2 159 aa8.2□□□□□ -1.1
SHROOM3-205ENST00000481002 C1orf196B1AJZ1 125 aa8.2□□□□□ -1.1
SHROOM3-205ENST00000481002 SERF1AO75920 110 aa8.2□□□□□ -1.1
SHROOM3-205ENST00000481002 SS18Q15532 418 aa8.2□□□□□ -1.1
SHROOM3-205ENST00000481002 PMCHL1Q16048 86 aa8.2□□□□□ -1.1
SHROOM3-205ENST00000481002 PDZD11Q5EBL8 140 aa8.2□□□□□ -1.1
SHROOM3-205ENST00000481002 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
SHROOM3-205ENST00000481002 CHCHD10Q8WYQ3 142 aaPredicted RBP8.2□□□□□ -1.1
SHROOM3-205ENST00000481002 A0A087WTM6 91 aa8.19□□□□□ -1.1
SHROOM3-205ENST00000481002 TRAV13-1A0A0B4J241 112 aa8.19□□□□□ -1.1
SHROOM3-205ENST00000481002 HSBP1O75506 76 aa8.19□□□□□ -1.1
SHROOM3-205ENST00000481002 PAPPA-AS1Q5QFB9 102 aa8.19□□□□□ -1.1
SHROOM3-205ENST00000481002 Q6ZN92 141 aa8.19□□□□□ -1.1
SHROOM3-205ENST00000481002 VCX2Q9H322 139 aa8.19□□□□□ -1.1
SHROOM3-205ENST00000481002 NUPR1O60356 82 aa8.18□□□□□ -1.1
SHROOM3-205ENST00000481002 TEX43Q6ZNM6 134 aa8.18□□□□□ -1.1
SHROOM3-205ENST00000481002 BAALCQ8WXS3 180 aa8.18□□□□□ -1.1
SHROOM3-205ENST00000481002 PKD1P98161 4303 aa8.18□□□□□ -1.1
SHROOM3-205ENST00000481002 A0A1B0GVY2 172 aa8.17□□□□□ -1.1
SHROOM3-205ENST00000481002 GAGE12HA6NDE8 117 aa8.17□□□□□ -1.1
SHROOM3-205ENST00000481002 IFITM10A6NMD0 228 aa8.17□□□□□ -1.1
SHROOM3-205ENST00000481002 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.17□□□□□ -1.1
SHROOM3-205ENST00000481002 XCL1P47992 114 aa8.17□□□□□ -1.1
SHROOM3-205ENST00000481002 FOXI1Q12951 378 aa8.17□□□□□ -1.1
SHROOM3-205ENST00000481002 ZC2HC1BQ5TFG8 222 aa8.17□□□□□ -1.1
SHROOM3-205ENST00000481002 CD164L2Q6UWJ8 174 aa8.17□□□□□ -1.1
SHROOM3-205ENST00000481002 FAM19A2Q8N3H0 131 aa8.17□□□□□ -1.1
SHROOM3-205ENST00000481002 C2orf88Q9BSF0 95 aa8.17□□□□□ -1.1
SHROOM3-205ENST00000481002 EREGO14944 169 aa8.16□□□□□ -1.1
SHROOM3-205ENST00000481002 ATP5LO75964 103 aa8.16□□□□□ -1.1
SHROOM3-205ENST00000481002 UBE2D1P51668 147 aa8.16□□□□□ -1.1
SHROOM3-205ENST00000481002 WFDC2Q14508 124 aa8.16□□□□□ -1.1
SHROOM3-205ENST00000481002 COA6Q5JTJ3 125 aaKnown RBP8.16□□□□□ -1.1
SHROOM3-205ENST00000481002 FAM19A3Q7Z5A8 133 aa8.16□□□□□ -1.1
SHROOM3-205ENST00000481002 LINC00242Q5T6M2 205 aa8.15□□□□□ -1.1
SHROOM3-205ENST00000481002 CST9LQ9H4G1 147 aa8.15□□□□□ -1.1
SHROOM3-205ENST00000481002 IGHV3OR16-9A0A0B4J2B5 98 aa8.14□□□□□ -1.11
SHROOM3-205ENST00000481002 USP17L23D6RBM5 183 aa8.14□□□□□ -1.11
SHROOM3-205ENST00000481002 LECT2O14960 151 aa8.14□□□□□ -1.11
SHROOM3-205ENST00000481002 PMVKQ15126 192 aa8.14□□□□□ -1.11
SHROOM3-205ENST00000481002 DNAH11Q96DT5 4516 aa8.14□□□□□ -1.11
SHROOM3-205ENST00000481002 NDUFA6P56556 154 aa8.13□□□□□ -1.11
SHROOM3-205ENST00000481002 SEC11AP67812 179 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 233.6 ms