RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 MDFICQ9P1T7 246 aa8.54□□□□□ -1.04
RAPGEF3-209ENST00000479866 TCL1BO95988 128 aa8.54□□□□□ -1.04
RAPGEF3-209ENST00000479866 ZNRF2Q8NHG8 242 aa8.54□□□□□ -1.04
RAPGEF3-209ENST00000479866 C11orf21Q9P2W6 132 aa8.54□□□□□ -1.04
RAPGEF3-209ENST00000479866 IGHV1OR15-1A0A075B7D0 117 aa8.54□□□□□ -1.04
RAPGEF3-209ENST00000479866 PRSS2P07478 247 aa8.54□□□□□ -1.04
RAPGEF3-209ENST00000479866 MRPL51Q4U2R6 128 aaKnown RBP8.54□□□□□ -1.04
RAPGEF3-209ENST00000479866 FAM104BQ5XKR9 115 aa8.54□□□□□ -1.04
RAPGEF3-209ENST00000479866 LGALS9O00182 355 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 COX6CP09669 75 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 PMAIP1Q13794 54 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 DPH3Q96FX2 82 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 TRGV1A0A0A0MS02 117 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 IGHV3-16A0A0C4DH30 117 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 MAP6D1Q9H9H5 199 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 TRGV2A0A075B6R0 118 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 ZNF815PA8K554 130 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 TMEM258P61165 79 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 LINC00526Q96FQ7 95 aa8.53□□□□□ -1.04
RAPGEF3-209ENST00000479866 INSP01308 110 aa8.52□□□□□ -1.04
RAPGEF3-209ENST00000479866 CEMP1Q6PRD7 247 aaPredicted RBP8.52□□□□□ -1.04
RAPGEF3-209ENST00000479866 Q6Q795 121 aa8.52□□□□□ -1.04
RAPGEF3-209ENST00000479866 ZFAND2AQ8N6M9 145 aa8.52□□□□□ -1.04
RAPGEF3-209ENST00000479866 COX7CP15954 63 aa8.52□□□□□ -1.05
RAPGEF3-209ENST00000479866 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
RAPGEF3-209ENST00000479866 LGALS9BQ3B8N2 356 aa8.51□□□□□ -1.05
RAPGEF3-209ENST00000479866 LGALS9CQ6DKI2 356 aa8.51□□□□□ -1.05
RAPGEF3-209ENST00000479866 LENEPQ9Y5L5 61 aa8.51□□□□□ -1.05
RAPGEF3-209ENST00000479866 STAB1Q9NY15 2570 aa8.51□□□□□ -1.05
RAPGEF3-209ENST00000479866 MGAM2Q2M2H8 2515 aa8.51□□□□□ -1.05
RAPGEF3-209ENST00000479866 HTN3P15516 51 aa8.51□□□□□ -1.05
RAPGEF3-209ENST00000479866 HHLA3Q9XRX5 114 aa8.51□□□□□ -1.05
RAPGEF3-209ENST00000479866 CRXO43186 299 aaPredicted RBP8.5□□□□□ -1.05
RAPGEF3-209ENST00000479866 SMCPP49901 116 aaPredicted RBP8.5□□□□□ -1.05
RAPGEF3-209ENST00000479866 RPS28P62857 69 aaKnown RBP8.5□□□□□ -1.05
RAPGEF3-209ENST00000479866 LINC01559Q495D7 138 aa8.5□□□□□ -1.05
RAPGEF3-209ENST00000479866 DPH3P1Q9H4G8 78 aa8.5□□□□□ -1.05
RAPGEF3-209ENST00000479866 IGKV2D-26A0A0A0MRZ7 120 aa8.5□□□□□ -1.05
RAPGEF3-209ENST00000479866 TRAV8-3A0A0A6YYJ7 113 aa8.5□□□□□ -1.05
RAPGEF3-209ENST00000479866 TRBV6-1A0A0K0K1D8 114 aa8.49□□□□□ -1.05
RAPGEF3-209ENST00000479866 ATOX1O00244 68 aa8.49□□□□□ -1.05
RAPGEF3-209ENST00000479866 DEFB130BP0DP73 79 aa8.49□□□□□ -1.05
RAPGEF3-209ENST00000479866 DEFB130AP0DP74 79 aa8.49□□□□□ -1.05
RAPGEF3-209ENST00000479866 ORMDL2Q53FV1 153 aa8.49□□□□□ -1.05
RAPGEF3-209ENST00000479866 PRO0461Q9UI25 63 aa8.49□□□□□ -1.05
RAPGEF3-209ENST00000479866 CUBNO60494 3623 aa8.49□□□□□ -1.05
RAPGEF3-209ENST00000479866 ATXN8Q156A1 80 aa8.49□□□□□ -1.05
RAPGEF3-209ENST00000479866 Q8N2B8 174 aa8.48□□□□□ -1.05
RAPGEF3-209ENST00000479866 NSD1Q96L73 2696 aaPredicted RBP8.48□□□□□ -1.05
RAPGEF3-209ENST00000479866 DGAT2L7PQ6IED9 249 aa8.48□□□□□ -1.05
RAPGEF3-209ENST00000479866 ZNF580Q9UK33 172 aa8.48□□□□□ -1.05
RAPGEF3-209ENST00000479866 PROK1P58294 105 aa8.48□□□□□ -1.05
RAPGEF3-209ENST00000479866 A0A1B0GXF2 115 aa8.47□□□□□ -1.05
RAPGEF3-209ENST00000479866 SOCS3O14543 225 aa8.47□□□□□ -1.05
RAPGEF3-209ENST00000479866 LINC00482Q8N8I6 264 aa8.47□□□□□ -1.05
RAPGEF3-209ENST00000479866 NDUFA11Q86Y39 141 aa8.47□□□□□ -1.05
RAPGEF3-209ENST00000479866 PHLDA1Q8WV24 401 aaPredicted RBP8.47□□□□□ -1.05
RAPGEF3-209ENST00000479866 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
RAPGEF3-209ENST00000479866 FAM19A4Q96LR4 140 aa8.47□□□□□ -1.05
RAPGEF3-209ENST00000479866 C9orf85Q96MD7 179 aa8.47□□□□□ -1.05
RAPGEF3-209ENST00000479866 IGKV3D-7A0A0C4DH55 119 aa8.46□□□□□ -1.05
RAPGEF3-209ENST00000479866 LINC01561Q8N1V8 128 aa8.46□□□□□ -1.05
RAPGEF3-209ENST00000479866 DEFB4AO15263 64 aa8.46□□□□□ -1.06
RAPGEF3-209ENST00000479866 DAD1P61803 113 aa8.46□□□□□ -1.06
RAPGEF3-209ENST00000479866 NOTCH1P46531 2555 aa8.45□□□□□ -1.06
RAPGEF3-209ENST00000479866 GAS8-AS1O95177 125 aa8.45□□□□□ -1.06
RAPGEF3-209ENST00000479866 TMEM158Q8WZ71 300 aa8.45□□□□□ -1.06
RAPGEF3-209ENST00000479866 NOP10Q9NPE3 64 aaKnown RBP8.45□□□□□ -1.06
RAPGEF3-209ENST00000479866 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
RAPGEF3-209ENST00000479866 ODF3L2Q3SX64 289 aa8.45□□□□□ -1.06
RAPGEF3-209ENST00000479866 DEFB121Q5J5C9 76 aa8.45□□□□□ -1.06
RAPGEF3-209ENST00000479866 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
RAPGEF3-209ENST00000479866 C20orf197Q8N268 126 aa8.45□□□□□ -1.06
RAPGEF3-209ENST00000479866 TIMM17BO60830 172 aa8.44□□□□□ -1.06
RAPGEF3-209ENST00000479866 CMC4P56277 68 aaPredicted RBP8.44□□□□□ -1.06
RAPGEF3-209ENST00000479866 SCGB3A1Q96QR1 104 aa8.44□□□□□ -1.06
RAPGEF3-209ENST00000479866 TRGV4A0A0C4DH28 118 aa8.44□□□□□ -1.06
RAPGEF3-209ENST00000479866 ZNF22P17026 224 aaPredicted RBP8.44□□□□□ -1.06
RAPGEF3-209ENST00000479866 C9orf66Q5T8R8 295 aa8.44□□□□□ -1.06
RAPGEF3-209ENST00000479866 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 C16orf95Q9H693 158 aa8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 NBEAL2Q6ZNJ1 2754 aa8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 H3BS24 57 aa8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 SUMO2P61956 95 aaKnown RBP8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 KLK9Q2XQG4 91 aa8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 URB1-AS1Q96HZ7 61 aa8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 MRPL35Q9NZE8 188 aaKnown RBP8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 PRO1854Q9UHT4 67 aa8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 INAFM2P0DMQ5 153 aa8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 LINC01620Q4KN68 170 aa8.43□□□□□ -1.06
RAPGEF3-209ENST00000479866 OTOGQ6ZRI0 2925 aa8.42□□□□□ -1.06
RAPGEF3-209ENST00000479866 RHOHQ15669 191 aa8.42□□□□□ -1.06
RAPGEF3-209ENST00000479866 DEFB135Q30KP9 77 aa8.42□□□□□ -1.06
RAPGEF3-209ENST00000479866 ODF3Q96PU9 254 aa8.42□□□□□ -1.06
RAPGEF3-209ENST00000479866 SDHAF1A6NFY7 115 aa8.42□□□□□ -1.06
RAPGEF3-209ENST00000479866 LAGE3Q14657 143 aa8.42□□□□□ -1.06
RAPGEF3-209ENST00000479866 RNASE3P12724 160 aaKnown RBP8.41□□□□□ -1.06
RAPGEF3-209ENST00000479866 SOSTDC1Q6X4U4 206 aa8.41□□□□□ -1.06
RAPGEF3-209ENST00000479866 MAPKAPK5-AS1Q8N8E1 139 aa8.41□□□□□ -1.06
RAPGEF3-209ENST00000479866 PDZD2O15018 2839 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms