RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 TCEAL7Q9BRU2 100 aa5.77□□□□□ -1.49
GPNMB-211ENST00000479625 MED28Q9H204 178 aa5.77□□□□□ -1.49
GPNMB-211ENST00000479625 A0A087WZ39 114 aa5.76□□□□□ -1.49
GPNMB-211ENST00000479625 FAM168BA1KXE4 195 aa5.76□□□□□ -1.49
GPNMB-211ENST00000479625 APOMO95445 188 aa5.76□□□□□ -1.49
GPNMB-211ENST00000479625 APCSP02743 223 aa5.76□□□□□ -1.49
GPNMB-211ENST00000479625 FHITP49789 147 aa5.76□□□□□ -1.49
GPNMB-211ENST00000479625 MARVELD1Q9BSK0 173 aa5.76□□□□□ -1.49
GPNMB-211ENST00000479625 TRAV1-1A0A0B4J248 108 aa5.75□□□□□ -1.49
GPNMB-211ENST00000479625 UPK1BO75841 260 aa5.75□□□□□ -1.49
GPNMB-211ENST00000479625 RPL13AP40429 203 aaKnown RBP5.75□□□□□ -1.49
GPNMB-211ENST00000479625 AKR1C8PQ5T2L2 129 aa5.75□□□□□ -1.49
GPNMB-211ENST00000479625 GATD1Q8NB37 220 aa5.75□□□□□ -1.49
GPNMB-211ENST00000479625 RPL39LQ96EH5 51 aaKnown RBP5.75□□□□□ -1.49
GPNMB-211ENST00000479625 CAMK2N2Q96S95 79 aa5.75□□□□□ -1.49
GPNMB-211ENST00000479625 OPRPNQ99935 248 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-211ENST00000479625 A0A1B0GV50 99 aa5.74□□□□□ -1.49
GPNMB-211ENST00000479625 TRGC1P0CF51 173 aa5.74□□□□□ -1.49
GPNMB-211ENST00000479625 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
GPNMB-211ENST00000479625 Q5BKY6 102 aa5.74□□□□□ -1.49
GPNMB-211ENST00000479625 OR2D3Q8NGH3 330 aa5.74□□□□□ -1.49
GPNMB-211ENST00000479625 ISOC2Q96AB3 205 aa5.74□□□□□ -1.49
GPNMB-211ENST00000479625 BCL2L11O43521 198 aa5.73□□□□□ -1.49
GPNMB-211ENST00000479625 NCR2O95944 276 aa5.73□□□□□ -1.49
GPNMB-211ENST00000479625 S100A9P06702 114 aaKnown RBP5.73□□□□□ -1.49
GPNMB-211ENST00000479625 ZNF25P17030 456 aaPredicted RBP5.73□□□□□ -1.49
GPNMB-211ENST00000479625 CD164L2Q6UWJ8 174 aa5.73□□□□□ -1.49
GPNMB-211ENST00000479625 LYZL1Q6UWQ5 148 aa5.73□□□□□ -1.49
GPNMB-211ENST00000479625 FAM19A5Q7Z5A7 132 aaPredicted RBP5.73□□□□□ -1.49
GPNMB-211ENST00000479625 BTF3L4Q96K17 158 aa5.73□□□□□ -1.49
GPNMB-211ENST00000479625 RETNLBQ9BQ08 111 aa5.73□□□□□ -1.49
GPNMB-211ENST00000479625 BORCS7-ASMTA0A0B4J1R7 106 aa5.72□□□□□ -1.49
GPNMB-211ENST00000479625 H7C423 109 aa5.72□□□□□ -1.49
GPNMB-211ENST00000479625 RPL35P42766 123 aaKnown RBP5.72□□□□□ -1.49
GPNMB-211ENST00000479625 SS18Q15532 418 aa5.72□□□□□ -1.49
GPNMB-211ENST00000479625 TMEM101Q96IK0 257 aa5.72□□□□□ -1.49
GPNMB-211ENST00000479625 SDHAF1A6NFY7 115 aa5.71□□□□□ -1.5
GPNMB-211ENST00000479625 PFDN1O60925 122 aa5.71□□□□□ -1.5
GPNMB-211ENST00000479625 MALP21145 153 aa5.71□□□□□ -1.5
GPNMB-211ENST00000479625 EIF5AL1Q6IS14 154 aaKnown RBP5.71□□□□□ -1.5
GPNMB-211ENST00000479625 TMUB2Q71RG4 321 aa5.71□□□□□ -1.5
GPNMB-211ENST00000479625 KRTAP7-1Q8IUC3 87 aa5.71□□□□□ -1.5
GPNMB-211ENST00000479625 ALG5Q9Y673 324 aa5.71□□□□□ -1.5
GPNMB-211ENST00000479625 C19orf71A6NCJ1 209 aa5.7□□□□□ -1.5
GPNMB-211ENST00000479625 COX7A2LO14548 114 aa5.7□□□□□ -1.5
GPNMB-211ENST00000479625 RPS20P60866 119 aaKnown RBP5.7□□□□□ -1.5
GPNMB-211ENST00000479625 SPAG11BQ08648 103 aa5.7□□□□□ -1.5
GPNMB-211ENST00000479625 CENPWQ5EE01 88 aa5.7□□□□□ -1.5
GPNMB-211ENST00000479625 RNASE13Q5GAN3 156 aaKnown RBP5.7□□□□□ -1.5
GPNMB-211ENST00000479625 S100ZQ8WXG8 99 aa5.7□□□□□ -1.5
GPNMB-211ENST00000479625 RPP21Q9H633 154 aaKnown RBP5.7□□□□□ -1.5
GPNMB-211ENST00000479625 CDC42SE2Q9NRR3 84 aa5.7□□□□□ -1.5
GPNMB-211ENST00000479625 TMEM242Q9NWH2 141 aa5.7□□□□□ -1.5
GPNMB-211ENST00000479625 FXYD6-FXYD2A0A087WZ82 144 aa5.69□□□□□ -1.5
GPNMB-211ENST00000479625 A0A087X002 238 aa5.69□□□□□ -1.5
GPNMB-211ENST00000479625 F2Z2F3 143 aa5.69□□□□□ -1.5
GPNMB-211ENST00000479625 TSHBP01222 138 aa5.69□□□□□ -1.5
GPNMB-211ENST00000479625 ESDP10768 282 aa5.69□□□□□ -1.5
GPNMB-211ENST00000479625 CTRLP40313 264 aa5.69□□□□□ -1.5
GPNMB-211ENST00000479625 FOXA3P55318 350 aaPredicted RBP5.69□□□□□ -1.5
GPNMB-211ENST00000479625 TWIST1Q15672 202 aa5.69□□□□□ -1.5
GPNMB-211ENST00000479625 TSKUQ8WUA8 353 aa5.69□□□□□ -1.5
GPNMB-211ENST00000479625 C2orf48Q96LS8 159 aa5.69□□□□□ -1.5
GPNMB-211ENST00000479625 I3L3M4 83 aa5.68□□□□□ -1.5
GPNMB-211ENST00000479625 M0QXV9 152 aa5.68□□□□□ -1.5
GPNMB-211ENST00000479625 IFNA1P01562 189 aa5.68□□□□□ -1.5
GPNMB-211ENST00000479625 PMCHP20382 165 aa5.68□□□□□ -1.5
GPNMB-211ENST00000479625 UBE2BP63146 152 aa5.68□□□□□ -1.5
GPNMB-211ENST00000479625 C5orf38Q86SI9 138 aa5.68□□□□□ -1.5
GPNMB-211ENST00000479625 MRAP2Q96G30 205 aa5.68□□□□□ -1.5
GPNMB-211ENST00000479625 CYTL1Q9NRR1 136 aa5.68□□□□□ -1.5
GPNMB-211ENST00000479625 CARHSP1Q9Y2V2 147 aaKnown RBP5.68□□□□□ -1.5
GPNMB-211ENST00000479625 C10orf25Q5T742 122 aa5.67□□□□□ -1.5
GPNMB-211ENST00000479625 MRPL52Q86TS9 123 aaKnown RBP5.67□□□□□ -1.5
GPNMB-211ENST00000479625 KCNRGQ8N5I3 272 aa5.67□□□□□ -1.5
GPNMB-211ENST00000479625 FAM213BQ8TBF2 198 aa5.67□□□□□ -1.5
GPNMB-211ENST00000479625 SFT2D1Q8WV19 159 aa5.67□□□□□ -1.5
GPNMB-211ENST00000479625 RNASE7Q9H1E1 156 aaKnown RBP5.67□□□□□ -1.5
GPNMB-211ENST00000479625 XKRY2A2RUG3 117 aa5.66□□□□□ -1.5
GPNMB-211ENST00000479625 RAB19A4D1S5 217 aa5.66□□□□□ -1.5
GPNMB-211ENST00000479625 G3V3Q6 166 aa5.66□□□□□ -1.5
GPNMB-211ENST00000479625 C21orf62-AS1Q17RA5 79 aa5.66□□□□□ -1.5
GPNMB-211ENST00000479625 GAGE2EQ4V326 116 aa5.66□□□□□ -1.5
GPNMB-211ENST00000479625 LINC00299Q6ZSB3 139 aa5.66□□□□□ -1.5
GPNMB-211ENST00000479625 C9orf62Q8N4C0 152 aa5.66□□□□□ -1.5
GPNMB-211ENST00000479625 C11orf52Q96A22 123 aa5.66□□□□□ -1.5
GPNMB-211ENST00000479625 CNFNQ9BYD5 112 aa5.66□□□□□ -1.5
GPNMB-211ENST00000479625 MRPL35Q9NZE8 188 aaKnown RBP5.66□□□□□ -1.5
GPNMB-211ENST00000479625 GAGE2DQ9UEU5 116 aa5.66□□□□□ -1.5
GPNMB-211ENST00000479625 TRBV20OR9-2A0A075B6H5 130 aa5.65□□□□□ -1.5
GPNMB-211ENST00000479625 TRAV13-1A0A0B4J241 112 aa5.65□□□□□ -1.5
GPNMB-211ENST00000479625 C1orf196B1AJZ1 125 aa5.65□□□□□ -1.5
GPNMB-211ENST00000479625 TPRXLQ17RH7 258 aa5.65□□□□□ -1.5
GPNMB-211ENST00000479625 ORAOV1Q8WV07 137 aa5.65□□□□□ -1.5
GPNMB-211ENST00000479625 MBD3L1Q8WWY6 194 aa5.65□□□□□ -1.5
GPNMB-211ENST00000479625 C6orf48Q9UBA6 75 aa5.65□□□□□ -1.5
GPNMB-211ENST00000479625 TRBV6-5A0A0K0K1A5 114 aa5.64□□□□□ -1.51
GPNMB-211ENST00000479625 C7orf77A4D0Y5 90 aa5.64□□□□□ -1.51
GPNMB-211ENST00000479625 ZNF861PO60384 105 aa5.64□□□□□ -1.51
GPNMB-211ENST00000479625 GIPP09681 153 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms