RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 ZNF702PQ9H963 129 aa9.69□□□□□ -0.86
PDZRN3-208ENST00000479530 SLURP1P55000 103 aa9.69□□□□□ -0.86
PDZRN3-208ENST00000479530 CCDC168Q8NDH2 2452 aa9.69□□□□□ -0.86
PDZRN3-208ENST00000479530 MIAQ16674 131 aa9.69□□□□□ -0.86
PDZRN3-208ENST00000479530 Q6ZSN1 163 aa9.69□□□□□ -0.86
PDZRN3-208ENST00000479530 VSIG2Q96IQ7 327 aa9.69□□□□□ -0.86
PDZRN3-208ENST00000479530 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.68□□□□□ -0.86
PDZRN3-208ENST00000479530 IGKV2-29A2NJV5 120 aaPredicted RBP9.68□□□□□ -0.86
PDZRN3-208ENST00000479530 SNRPD3P62318 126 aaKnown RBP9.68□□□□□ -0.86
PDZRN3-208ENST00000479530 TMEM61Q8N0U2 210 aa9.68□□□□□ -0.86
PDZRN3-208ENST00000479530 SPANXDQ9BXN6 97 aa9.68□□□□□ -0.86
PDZRN3-208ENST00000479530 SPANXCQ9NY87 97 aa9.68□□□□□ -0.86
PDZRN3-208ENST00000479530 PYGO1Q9Y3Y4 419 aa9.68□□□□□ -0.86
PDZRN3-208ENST00000479530 WNK1Q9H4A3 2382 aa9.67□□□□□ -0.86
PDZRN3-208ENST00000479530 Q6Q795 121 aa9.67□□□□□ -0.86
PDZRN3-208ENST00000479530 IGHV3-38A0A0C4DH36 116 aa9.66□□□□□ -0.86
PDZRN3-208ENST00000479530 LST1O00453 97 aa9.66□□□□□ -0.86
PDZRN3-208ENST00000479530 IGHV4-31P0DP07 118 aa9.66□□□□□ -0.86
PDZRN3-208ENST00000479530 MEIG1Q5JSS6 88 aa9.66□□□□□ -0.86
PDZRN3-208ENST00000479530 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.66□□□□□ -0.86
PDZRN3-208ENST00000479530 DSCR9P59020 149 aa9.66□□□□□ -0.86
PDZRN3-208ENST00000479530 C5orf47Q569G3 176 aa9.66□□□□□ -0.86
PDZRN3-208ENST00000479530 CHCHD7Q9BUK0 85 aa9.66□□□□□ -0.86
PDZRN3-208ENST00000479530 SPANXA1Q9NS26 97 aa9.66□□□□□ -0.86
PDZRN3-208ENST00000479530 Q6YL49 198 aa9.65□□□□□ -0.86
PDZRN3-208ENST00000479530 UBE2D4Q9Y2X8 147 aa9.65□□□□□ -0.86
PDZRN3-208ENST00000479530 CSDC2Q9Y534 153 aaKnown RBP9.65□□□□□ -0.86
PDZRN3-208ENST00000479530 NOTCH3Q9UM47 2321 aa9.65□□□□□ -0.86
PDZRN3-208ENST00000479530 COX6CP09669 75 aa9.65□□□□□ -0.86
PDZRN3-208ENST00000479530 TRGV11A0A075B6L2 103 aa9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 A0A0U1RRA0 63 aa9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 H3BT86 120 aa9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 C3orf56Q8N813 242 aa9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 LINC00467Q9BRT7 94 aa9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 CHCHD5Q9BSY4 110 aa9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 CDKN2A-AS1Q9UH64 79 aa9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 C2CD3Q4AC94 2353 aa9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 TINCRA0A1B0GVN0 87 aa9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 RBMY1BA6NDE4 496 aaKnown RBP9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 RBMY1EA6NEQ0 496 aaKnown RBP9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 RBMY1DP0C7P1 496 aaKnown RBP9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 DEFB131AP59861 70 aa9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 CITED2Q99967 270 aaPredicted RBP9.64□□□□□ -0.87
PDZRN3-208ENST00000479530 FSHBP01225 129 aa9.63□□□□□ -0.87
PDZRN3-208ENST00000479530 ZNF625Q96I27 306 aaPredicted RBP9.63□□□□□ -0.87
PDZRN3-208ENST00000479530 ITPR3Q14573 2671 aa9.63□□□□□ -0.87
PDZRN3-208ENST00000479530 UBE2E2Q96LR5 201 aa9.63□□□□□ -0.87
PDZRN3-208ENST00000479530 TMEM126AQ9H061 195 aa9.62□□□□□ -0.87
PDZRN3-208ENST00000479530 CR1P17927 2039 aa9.61□□□□□ -0.87
PDZRN3-208ENST00000479530 J3QLI3 93 aa9.61□□□□□ -0.87
PDZRN3-208ENST00000479530 COX6A2Q02221 97 aa9.61□□□□□ -0.87
PDZRN3-208ENST00000479530 TMEM89A2RUT3 159 aa9.61□□□□□ -0.87
PDZRN3-208ENST00000479530 ACANP16112 2415 aa9.61□□□□□ -0.87
PDZRN3-208ENST00000479530 KHDC1LQ5JSQ8 128 aa9.61□□□□□ -0.87
PDZRN3-208ENST00000479530 Q8N2B8 174 aa9.61□□□□□ -0.87
PDZRN3-208ENST00000479530 C11orf44Q8N8P7 122 aa9.61□□□□□ -0.87
PDZRN3-208ENST00000479530 TMEM101Q96IK0 257 aa9.61□□□□□ -0.87
PDZRN3-208ENST00000479530 DEFB121Q5J5C9 76 aa9.6□□□□□ -0.87
PDZRN3-208ENST00000479530 JMJD1CQ15652 2540 aa9.6□□□□□ -0.87
PDZRN3-208ENST00000479530 NDUFA7O95182 113 aa9.59□□□□□ -0.87
PDZRN3-208ENST00000479530 EDA2RQ9HAV5 297 aa9.59□□□□□ -0.87
PDZRN3-208ENST00000479530 FAM240AA0A1B0GVK7 77 aa9.59□□□□□ -0.87
PDZRN3-208ENST00000479530 Q96MF0 132 aa9.59□□□□□ -0.87
PDZRN3-208ENST00000479530 SMCR5Q8TEV8 140 aa9.58□□□□□ -0.88
PDZRN3-208ENST00000479530 FLNAP21333 2647 aaKnown RBP9.58□□□□□ -0.88
PDZRN3-208ENST00000479530 HIST2H2BCQ6DN03 193 aa9.58□□□□□ -0.88
PDZRN3-208ENST00000479530 SOSTDC1Q6X4U4 206 aa9.58□□□□□ -0.88
PDZRN3-208ENST00000479530 ZNF843Q8N446 348 aa9.58□□□□□ -0.88
PDZRN3-208ENST00000479530 LINC00308Q8TCZ7 52 aa9.58□□□□□ -0.88
PDZRN3-208ENST00000479530 Q9H8V8 135 aa9.58□□□□□ -0.88
PDZRN3-208ENST00000479530 MTORP42345 2549 aa9.58□□□□□ -0.88
PDZRN3-208ENST00000479530 TENM4Q6N022 2769 aa9.58□□□□□ -0.88
PDZRN3-208ENST00000479530 NDUFA1O15239 70 aa9.58□□□□□ -0.88
PDZRN3-208ENST00000479530 RNF152Q8N8N0 203 aa9.57□□□□□ -0.88
PDZRN3-208ENST00000479530 IGHV3OR16-12A0A075B7B8 117 aa9.57□□□□□ -0.88
PDZRN3-208ENST00000479530 TRAV25A0A0B4J276 109 aa9.57□□□□□ -0.88
PDZRN3-208ENST00000479530 MRPL23Q16540 153 aaKnown RBP9.57□□□□□ -0.88
PDZRN3-208ENST00000479530 DNAJC30Q96LL9 226 aa9.57□□□□□ -0.88
PDZRN3-208ENST00000479530 LINC01587Q99440 93 aa9.57□□□□□ -0.88
PDZRN3-208ENST00000479530 TRBV7-7A0A0K0K1E9 115 aa9.56□□□□□ -0.88
PDZRN3-208ENST00000479530 TIMM17BO60830 172 aa9.56□□□□□ -0.88
PDZRN3-208ENST00000479530 FAM236AA0A1B0GUQ0 79 aa9.56□□□□□ -0.88
PDZRN3-208ENST00000479530 FAM236BA0A1B0GV22 79 aa9.56□□□□□ -0.88
PDZRN3-208ENST00000479530 DEFB113Q30KQ7 82 aa9.56□□□□□ -0.88
PDZRN3-208ENST00000479530 SMIM9A6NGZ8 99 aa9.55□□□□□ -0.88
PDZRN3-208ENST00000479530 LINC00694P0DN24 101 aa9.55□□□□□ -0.88
PDZRN3-208ENST00000479530 KRTAP1-3Q8IUG1 177 aa9.55□□□□□ -0.88
PDZRN3-208ENST00000479530 A0A1W2PRX2 142 aa9.55□□□□□ -0.88
PDZRN3-208ENST00000479530 WIPF1O43516 503 aa9.55□□□□□ -0.88
PDZRN3-208ENST00000479530 SETXQ7Z333 2677 aaKnown RBP9.55□□□□□ -0.88
PDZRN3-208ENST00000479530 IGLV5-45A0A087WSX0 123 aa9.54□□□□□ -0.88
PDZRN3-208ENST00000479530 LINC00242Q5T6M2 205 aa9.54□□□□□ -0.88
PDZRN3-208ENST00000479530 COX7A2LO14548 114 aa9.54□□□□□ -0.88
PDZRN3-208ENST00000479530 MAP6D1Q9H9H5 199 aa9.54□□□□□ -0.88
PDZRN3-208ENST00000479530 LOC107984640A0A0U1RRK4 108 aa9.53□□□□□ -0.88
PDZRN3-208ENST00000479530 DAZ2Q13117 558 aaKnown RBP9.53□□□□□ -0.88
PDZRN3-208ENST00000479530 DAZ4Q86SG3 579 aaKnown RBP9.53□□□□□ -0.88
PDZRN3-208ENST00000479530 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
PDZRN3-208ENST00000479530 DAZ3Q9NR90 486 aaKnown RBP9.53□□□□□ -0.88
PDZRN3-208ENST00000479530 C22orf24Q9Y442 160 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms