RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 ARFGEF1Q9Y6D6 1849 aa3.14□□□□□ -1.91
RC3H1-204ENST00000479099 BRWD1Q9NSI6 2320 aa3.14□□□□□ -1.91
RC3H1-204ENST00000479099 BAZ2BQ9UIF8 2168 aaKnown RBP3.14□□□□□ -1.91
RC3H1-204ENST00000479099 A0A1W2PNN7 141 aa3.14□□□□□ -1.91
RC3H1-204ENST00000479099 IQCF6A8MYZ5 107 aa3.14□□□□□ -1.91
RC3H1-204ENST00000479099 PPP1R17O96001 155 aa3.14□□□□□ -1.91
RC3H1-204ENST00000479099 SAA2P0DJI9 122 aaPredicted RBP3.14□□□□□ -1.91
RC3H1-204ENST00000479099 PSMG4Q5JS54 123 aa3.14□□□□□ -1.91
RC3H1-204ENST00000479099 PI4KAP42356 2102 aa3.14□□□□□ -1.91
RC3H1-204ENST00000479099 ARFGEF3Q5TH69 2177 aa3.14□□□□□ -1.91
RC3H1-204ENST00000479099 SPTBP11277 2137 aa3.13□□□□□ -1.91
RC3H1-204ENST00000479099 IGLV3-32A0A0A0MS00 114 aa3.13□□□□□ -1.91
RC3H1-204ENST00000479099 IGKV1-17P01599 117 aa3.13□□□□□ -1.91
RC3H1-204ENST00000479099 LINC00315P59091 139 aa3.13□□□□□ -1.91
RC3H1-204ENST00000479099 AMELXQ99217 191 aa3.13□□□□□ -1.91
RC3H1-204ENST00000479099 GPR179Q6PRD1 2367 aa3.13□□□□□ -1.91
RC3H1-204ENST00000479099 GBF1Q92538 1859 aa3.12□□□□□ -1.91
RC3H1-204ENST00000479099 MYMXA0A1B0GTQ4 84 aa3.12□□□□□ -1.91
RC3H1-204ENST00000479099 FAM223BA6NKX1 122 aa3.12□□□□□ -1.91
RC3H1-204ENST00000479099 SPAG11BQ08648 103 aa3.12□□□□□ -1.91
RC3H1-204ENST00000479099 PRR9Q5T870 116 aa3.12□□□□□ -1.91
RC3H1-204ENST00000479099 SPAG11AQ6PDA7 123 aa3.12□□□□□ -1.91
RC3H1-204ENST00000479099 COX7B2Q8TF08 81 aa3.12□□□□□ -1.91
RC3H1-204ENST00000479099 PSENENQ9NZ42 101 aa3.12□□□□□ -1.91
RC3H1-204ENST00000479099 KLK9Q9UKQ9 250 aa3.12□□□□□ -1.91
RC3H1-204ENST00000479099 RAPGEF6Q8TEU7 1601 aa3.11□□□□□ -1.91
RC3H1-204ENST00000479099 CCDC180Q9P1Z9 1646 aa3.11□□□□□ -1.91
RC3H1-204ENST00000479099 RREB1Q92766 1687 aa3.11□□□□□ -1.91
RC3H1-204ENST00000479099 MRC1P22897 1456 aa3.11□□□□□ -1.91
RC3H1-204ENST00000479099 ATRXP46100 2492 aa3.11□□□□□ -1.91
RC3H1-204ENST00000479099 IGKV3D-7A0A0C4DH55 119 aa3.11□□□□□ -1.91
RC3H1-204ENST00000479099 IGKV3OR2-268A0A0C4DH90 116 aa3.11□□□□□ -1.91
RC3H1-204ENST00000479099 H3BRN7 92 aa3.11□□□□□ -1.91
RC3H1-204ENST00000479099 C1orf167Q5SNV9 1468 aa3.1□□□□□ -1.91
RC3H1-204ENST00000479099 LOC285556D6RIA3 1793 aa3.1□□□□□ -1.91
RC3H1-204ENST00000479099 MAP2P11137 1827 aaKnown RBP3.1□□□□□ -1.91
RC3H1-204ENST00000479099 A0A087WXM4 84 aa3.1□□□□□ -1.91
RC3H1-204ENST00000479099 WFDC10AQ9H1F0 79 aa3.1□□□□□ -1.91
RC3H1-204ENST00000479099 ARL2-SNX15V9GYD0 113 aa3.1□□□□□ -1.91
RC3H1-204ENST00000479099 SCN7AQ01118 1682 aa3.1□□□□□ -1.91
RC3H1-204ENST00000479099 URB2Q14146 1524 aaKnown RBP3.09□□□□□ -1.91
RC3H1-204ENST00000479099 ASXL1Q8IXJ9 1541 aa3.09□□□□□ -1.91
RC3H1-204ENST00000479099 KIF1AQ12756 1690 aa3.09□□□□□ -1.91
RC3H1-204ENST00000479099 SFTA3P0C7M3 94 aa3.09□□□□□ -1.91
RC3H1-204ENST00000479099 PLGLAQ15195 96 aa3.09□□□□□ -1.91
RC3H1-204ENST00000479099 SPAG17Q6Q759 2223 aa3.09□□□□□ -1.91
RC3H1-204ENST00000479099 SHANK1Q9Y566 2161 aa3.08□□□□□ -1.92
RC3H1-204ENST00000479099 NBDYA0A0U1RRE5 68 aa3.08□□□□□ -1.92
RC3H1-204ENST00000479099 A0A1B0GWA3 101 aa3.08□□□□□ -1.92
RC3H1-204ENST00000479099 ARMS2P0C7Q2 107 aa3.08□□□□□ -1.92
RC3H1-204ENST00000479099 FAM74A4Q5TZK3 123 aa3.08□□□□□ -1.92
RC3H1-204ENST00000479099 PLXNC1O60486 1568 aa3.08□□□□□ -1.92
RC3H1-204ENST00000479099 TRGV4A0A0C4DH28 118 aa3.07□□□□□ -1.92
RC3H1-204ENST00000479099 CEBPZOSA8MTT3 80 aa3.07□□□□□ -1.92
RC3H1-204ENST00000479099 DNAL4O96015 105 aa3.07□□□□□ -1.92
RC3H1-204ENST00000479099 IGLV3-19P01714 112 aa3.07□□□□□ -1.92
RC3H1-204ENST00000479099 CCL18P55774 89 aa3.07□□□□□ -1.92
RC3H1-204ENST00000479099 RPL37AP61513 92 aaKnown RBP3.07□□□□□ -1.92
RC3H1-204ENST00000479099 ZNF563Q8TA94 476 aa3.07□□□□□ -1.92
RC3H1-204ENST00000479099 TTTY12Q9BZ98 90 aa3.07□□□□□ -1.92
RC3H1-204ENST00000479099 R4GMQ9 66 aa3.07□□□□□ -1.92
RC3H1-204ENST00000479099 PRRC2AP48634 2157 aaKnown RBP3.07□□□□□ -1.92
RC3H1-204ENST00000479099 IGKV2-24A0A0C4DH68 120 aa3.06□□□□□ -1.92
RC3H1-204ENST00000479099 INE1O15225 51 aa3.06□□□□□ -1.92
RC3H1-204ENST00000479099 ABCA6Q8N139 1617 aa3.06□□□□□ -1.92
RC3H1-204ENST00000479099 TMEM14CQ9P0S9 112 aa3.06□□□□□ -1.92
RC3H1-204ENST00000479099 TNRC6BQ9UPQ9 1833 aaKnown RBP3.06□□□□□ -1.92
RC3H1-204ENST00000479099 ABCA4P78363 2273 aa3.05□□□□□ -1.92
RC3H1-204ENST00000479099 PRRC2BQ5JSZ5 2229 aaKnown RBP3.05□□□□□ -1.92
RC3H1-204ENST00000479099 ALPK2Q86TB3 2170 aa3.05□□□□□ -1.92
RC3H1-204ENST00000479099 SIPA1L3O60292 1781 aaPredicted RBP3.05□□□□□ -1.92
RC3H1-204ENST00000479099 IGKV2-40A0A087WW87 121 aaPredicted RBP3.05□□□□□ -1.92
RC3H1-204ENST00000479099 F8VRH5 84 aa3.05□□□□□ -1.92
RC3H1-204ENST00000479099 FXYD1O00168 92 aa3.05□□□□□ -1.92
RC3H1-204ENST00000479099 IGKV2D-40P01614 121 aaPredicted RBP3.05□□□□□ -1.92
RC3H1-204ENST00000479099 COX8AP10176 69 aa3.05□□□□□ -1.92
RC3H1-204ENST00000479099 Q6JHZ5 121 aa3.05□□□□□ -1.92
RC3H1-204ENST00000479099 LINC00322Q6ZN03 302 aaPredicted RBP3.05□□□□□ -1.92
RC3H1-204ENST00000479099 C6orf201Q7Z4U5 140 aa3.05□□□□□ -1.92
RC3H1-204ENST00000479099 PPP1R1CQ8WVI7 109 aa3.05□□□□□ -1.92
RC3H1-204ENST00000479099 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
RC3H1-204ENST00000479099 PCDH15Q96QU1 1955 aa3.05□□□□□ -1.92
RC3H1-204ENST00000479099 ADGRB2O60241 1585 aa3.04□□□□□ -1.92
RC3H1-204ENST00000479099 MYO7BQ6PIF6 2116 aa3.04□□□□□ -1.92
RC3H1-204ENST00000479099 A0A087WTM6 91 aa3.04□□□□□ -1.92
RC3H1-204ENST00000479099 M0R2N4 97 aa3.04□□□□□ -1.92
RC3H1-204ENST00000479099 LEPROTL1O95214 131 aa3.04□□□□□ -1.92
RC3H1-204ENST00000479099 FXYD3Q14802 87 aa3.04□□□□□ -1.92
RC3H1-204ENST00000479099 PRR15LQ9BU68 103 aa3.04□□□□□ -1.92
RC3H1-204ENST00000479099 PROK2Q9HC23 129 aa3.04□□□□□ -1.92
RC3H1-204ENST00000479099 V9GYV3 84 aa3.04□□□□□ -1.92
RC3H1-204ENST00000479099 RTTNQ86VV8 2226 aa3.03□□□□□ -1.92
RC3H1-204ENST00000479099 LOC110117498A0A087WWA1 95 aa3.03□□□□□ -1.92
RC3H1-204ENST00000479099 GCHFRP30047 84 aa3.03□□□□□ -1.92
RC3H1-204ENST00000479099 HCP5Q6MZN7 132 aa3.03□□□□□ -1.92
RC3H1-204ENST00000479099 SHROOM3Q8TF72 1996 aa3.03□□□□□ -1.92
RC3H1-204ENST00000479099 TET1Q8NFU7 2136 aa3.02□□□□□ -1.93
RC3H1-204ENST00000479099 IGKV2-29A2NJV5 120 aaPredicted RBP3.02□□□□□ -1.93
RC3H1-204ENST00000479099 IL9P15248 144 aa3.02□□□□□ -1.93
RC3H1-204ENST00000479099 IGFL1Q6UW32 110 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms