RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 CHCHD5Q9BSY4 110 aa13.42□□□□□ -0.26
TRIM8-203ENST00000479004 TMEM243Q9BU79 118 aa13.42□□□□□ -0.26
TRIM8-203ENST00000479004 MYCBP2O75592 4640 aa13.41□□□□□ -0.26
TRIM8-203ENST00000479004 PRSS47A8MTI9 375 aa13.41□□□□□ -0.26
TRIM8-203ENST00000479004 TCAPO15273 167 aa13.41□□□□□ -0.26
TRIM8-203ENST00000479004 Q8N976 141 aa13.41□□□□□ -0.26
TRIM8-203ENST00000479004 SMIM2Q9BVW6 85 aa13.41□□□□□ -0.26
TRIM8-203ENST00000479004 MAP1LC3AQ9H492 121 aa13.41□□□□□ -0.26
TRIM8-203ENST00000479004 FAM229AH3BQW9 127 aa13.4□□□□□ -0.26
TRIM8-203ENST00000479004 TSHBP01222 138 aa13.4□□□□□ -0.26
TRIM8-203ENST00000479004 FCER1GP30273 86 aa13.4□□□□□ -0.26
TRIM8-203ENST00000479004 MPV17L2Q567V2 206 aa13.4□□□□□ -0.26
TRIM8-203ENST00000479004 ENHOQ6UWT2 76 aa13.4□□□□□ -0.26
TRIM8-203ENST00000479004 DEFB104AQ8WTQ1 72 aa13.4□□□□□ -0.26
TRIM8-203ENST00000479004 Q6ZSA8 131 aa13.39□□□□□ -0.27
TRIM8-203ENST00000479004 UBE2L6O14933 153 aa13.38□□□□□ -0.27
TRIM8-203ENST00000479004 ALKBH7Q9BT30 221 aaPredicted RBP13.38□□□□□ -0.27
TRIM8-203ENST00000479004 SRRM2Q9UQ35 2752 aaKnown RBP13.37□□□□□ -0.27
TRIM8-203ENST00000479004 SCO1O75880 301 aa13.37□□□□□ -0.27
TRIM8-203ENST00000479004 GAGE6Q13070 117 aa13.37□□□□□ -0.27
TRIM8-203ENST00000479004 C1orf43Q9BWL3 253 aa13.37□□□□□ -0.27
TRIM8-203ENST00000479004 LOC389332A0A1B0GUA5 103 aa13.36□□□□□ -0.27
TRIM8-203ENST00000479004 COLCA2A8K830 154 aa13.36□□□□□ -0.27
TRIM8-203ENST00000479004 H7C423 109 aa13.36□□□□□ -0.27
TRIM8-203ENST00000479004 CRPP02741 224 aa13.36□□□□□ -0.27
TRIM8-203ENST00000479004 ANGP03950 147 aaKnown RBP13.36□□□□□ -0.27
TRIM8-203ENST00000479004 ESDP10768 282 aa13.36□□□□□ -0.27
TRIM8-203ENST00000479004 RAB5AP20339 215 aa13.35□□□□□ -0.27
TRIM8-203ENST00000479004 Q8N8P6 123 aa13.35□□□□□ -0.27
TRIM8-203ENST00000479004 NXT2Q9NPJ8 142 aaKnown RBP13.35□□□□□ -0.27
TRIM8-203ENST00000479004 LINC01620Q4KN68 170 aa13.34□□□□□ -0.27
TRIM8-203ENST00000479004 K7EMI3 77 aa13.33□□□□□ -0.28
TRIM8-203ENST00000479004 RBX1P62877 108 aa13.33□□□□□ -0.28
TRIM8-203ENST00000479004 MIAQ16674 131 aa13.33□□□□□ -0.28
TRIM8-203ENST00000479004 PRR34Q9NV39 138 aa13.33□□□□□ -0.28
TRIM8-203ENST00000479004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.32□□□□□ -0.28
TRIM8-203ENST00000479004 A0A1B0GUV1 79 aa13.32□□□□□ -0.28
TRIM8-203ENST00000479004 IGKV2-29A2NJV5 120 aaPredicted RBP13.32□□□□□ -0.28
TRIM8-203ENST00000479004 TMEM18Q96B42 140 aa13.32□□□□□ -0.28
TRIM8-203ENST00000479004 SMAGPQ0VAQ4 97 aa13.31□□□□□ -0.28
TRIM8-203ENST00000479004 C14orf177Q52M58 125 aa13.31□□□□□ -0.28
TRIM8-203ENST00000479004 AMMECR1LQ6DCA0 310 aa13.31□□□□□ -0.28
TRIM8-203ENST00000479004 PRSS3P2Q8NHM4 247 aa13.31□□□□□ -0.28
TRIM8-203ENST00000479004 IFI27P40305 119 aaPredicted RBP13.3□□□□□ -0.28
TRIM8-203ENST00000479004 LINC00269Q8N2A0 174 aa13.3□□□□□ -0.28
TRIM8-203ENST00000479004 FGF6P10767 208 aa13.29□□□□□ -0.28
TRIM8-203ENST00000479004 ZNF25P17030 456 aaPredicted RBP13.29□□□□□ -0.28
TRIM8-203ENST00000479004 ORMDL2Q53FV1 153 aa13.29□□□□□ -0.28
TRIM8-203ENST00000479004 RNASEKQ6P5S7 137 aaKnown RBP13.29□□□□□ -0.28
TRIM8-203ENST00000479004 C20orf203Q8NBC4 194 aa13.29□□□□□ -0.28
TRIM8-203ENST00000479004 TRGC2P03986 189 aa13.28□□□□□ -0.28
TRIM8-203ENST00000479004 KRTAP26-1Q6PEX3 210 aa13.28□□□□□ -0.28
TRIM8-203ENST00000479004 CLPSL2Q6UWE3 100 aa13.28□□□□□ -0.28
TRIM8-203ENST00000479004 MRPL52Q86TS9 123 aaKnown RBP13.28□□□□□ -0.28
TRIM8-203ENST00000479004 TMEM101Q96IK0 257 aa13.28□□□□□ -0.28
TRIM8-203ENST00000479004 USP17L23D6RBM5 183 aa13.27□□□□□ -0.29
TRIM8-203ENST00000479004 SCXQ7RTU7 201 aa13.27□□□□□ -0.29
TRIM8-203ENST00000479004 C18orf32Q8TCD1 76 aa13.27□□□□□ -0.29
TRIM8-203ENST00000479004 IGLV4-60A0A075B6I1 120 aa13.26□□□□□ -0.29
TRIM8-203ENST00000479004 G0S2P27469 103 aa13.26□□□□□ -0.29
TRIM8-203ENST00000479004 FA2HQ7L5A8 372 aa13.26□□□□□ -0.29
TRIM8-203ENST00000479004 LINC00528Q8N1L1 170 aa13.26□□□□□ -0.29
TRIM8-203ENST00000479004 DGAT2L7PQ6IED9 249 aa13.25□□□□□ -0.29
TRIM8-203ENST00000479004 OR5A1Q8NGJ0 315 aa13.25□□□□□ -0.29
TRIM8-203ENST00000479004 CHAC1Q9BUX1 264 aa13.25□□□□□ -0.29
TRIM8-203ENST00000479004 TIMM21Q9BVV7 248 aa13.25□□□□□ -0.29
TRIM8-203ENST00000479004 CSDC2Q9Y534 153 aaKnown RBP13.25□□□□□ -0.29
TRIM8-203ENST00000479004 PKHD1L1Q86WI1 4243 aa13.24□□□□□ -0.29
TRIM8-203ENST00000479004 LINC01546A6NGU7 62 aa13.24□□□□□ -0.29
TRIM8-203ENST00000479004 PLA2G1BP04054 148 aaKnown RBP13.24□□□□□ -0.29
TRIM8-203ENST00000479004 RAB5BP61020 215 aa13.24□□□□□ -0.29
TRIM8-203ENST00000479004 REG3AQ06141 175 aa13.24□□□□□ -0.29
TRIM8-203ENST00000479004 UBE2D4Q9Y2X8 147 aa13.24□□□□□ -0.29
TRIM8-203ENST00000479004 PRSS1P07477 247 aa13.23□□□□□ -0.29
TRIM8-203ENST00000479004 RPL39P62891 51 aaKnown RBP13.23□□□□□ -0.29
TRIM8-203ENST00000479004 FLG2Q5D862 2391 aaPredicted RBP13.23□□□□□ -0.29
TRIM8-203ENST00000479004 SPANXA1Q9NS26 97 aa13.22□□□□□ -0.29
TRIM8-203ENST00000479004 CYSLTR1Q9Y271 337 aa13.22□□□□□ -0.29
TRIM8-203ENST00000479004 FAT3Q8TDW7 4589 aa13.22□□□□□ -0.29
TRIM8-203ENST00000479004 TRAV8-4A0A0B4J246 113 aa13.21□□□□□ -0.29
TRIM8-203ENST00000479004 LINC00614P0C842 121 aa13.21□□□□□ -0.29
TRIM8-203ENST00000479004 C2orf66Q6UXQ4 117 aa13.21□□□□□ -0.29
TRIM8-203ENST00000479004 CIRBP-AS1Q8TBR5 109 aa13.21□□□□□ -0.29
TRIM8-203ENST00000479004 CDC42SE2Q9NRR3 84 aa13.21□□□□□ -0.29
TRIM8-203ENST00000479004 AP5S1Q9NUS5 200 aa13.21□□□□□ -0.29
TRIM8-203ENST00000479004 IGLV10-54A0A075B6I4 117 aa13.2□□□□□ -0.3
TRIM8-203ENST00000479004 ZNF664Q8N3J9 261 aa13.2□□□□□ -0.3
TRIM8-203ENST00000479004 PYGO1Q9Y3Y4 419 aa13.2□□□□□ -0.3
TRIM8-203ENST00000479004 LINC01549A6NIU2 74 aa13.19□□□□□ -0.3
TRIM8-203ENST00000479004 DMBT1Q9UGM3 2413 aaPredicted RBP13.18□□□□□ -0.3
TRIM8-203ENST00000479004 C9orf163Q8N9P6 203 aa13.18□□□□□ -0.3
TRIM8-203ENST00000479004 URB1-AS1Q96HZ7 61 aa13.18□□□□□ -0.3
TRIM8-203ENST00000479004 MRPS36P82909 103 aaKnown RBP13.17□□□□□ -0.3
TRIM8-203ENST00000479004 BAGE3Q86Y29 109 aa13.17□□□□□ -0.3
TRIM8-203ENST00000479004 TOMM6Q96B49 74 aa13.17□□□□□ -0.3
TRIM8-203ENST00000479004 CHCHD1Q96BP2 118 aaKnown RBP13.17□□□□□ -0.3
TRIM8-203ENST00000479004 LRP1Q07954 4544 aaKnown RBP13.17□□□□□ -0.3
TRIM8-203ENST00000479004 IGKV3OR2-268A0A0C4DH90 116 aa13.15□□□□□ -0.3
TRIM8-203ENST00000479004 NPSP0C0P6 89 aa13.15□□□□□ -0.3
TRIM8-203ENST00000479004 Q6ZUT4 128 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms