RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 TRIAP1O43715 76 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 WT1P19544 449 aaPredicted RBP4.13□□□□□ -1.75
USF3-202ENST00000478658 NEXN-AS1Q8NBZ9 246 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 CIRBP-AS1Q8TBR5 109 aa4.13□□□□□ -1.75
USF3-202ENST00000478658 Q6ZTC4 211 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 C4orf51C9J302 202 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 PRM2P04554 102 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 C6orf223Q8N319 242 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 PRORYQ9H606 182 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 COL5A3P25940 1745 aaPredicted RBP4.12□□□□□ -1.75
USF3-202ENST00000478658 H0Y9P7 68 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 BCE1O60756 84 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 FAM19A5Q7Z5A7 132 aaPredicted RBP4.12□□□□□ -1.75
USF3-202ENST00000478658 NAV3Q8IVL0 2385 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 COLCA2A8K830 154 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 LINC00575Q6W349 94 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 LINC00269Q8N2A0 174 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 GPHA2Q96T91 129 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 FLG2Q5D862 2391 aaPredicted RBP4.12□□□□□ -1.75
USF3-202ENST00000478658 IGF2-ASQ6U949 168 aa4.12□□□□□ -1.75
USF3-202ENST00000478658 TGFBR3LH3BV60 316 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 K7ERJ3 54 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 DAZAP2Q15038 168 aaPredicted RBP4.11□□□□□ -1.75
USF3-202ENST00000478658 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 LINC01561Q8N1V8 128 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 IGLV9-49A0A0B4J1Y8 123 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 RUSC1-AS1Q66K80 236 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 AGPAT4-IT1Q9H0P7 198 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 IGHV4-30-2A0A087WSY4 118 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 ITGBL1O95965 494 aaPredicted RBP4.11□□□□□ -1.75
USF3-202ENST00000478658 IGHV4-61A0A0C4DH41 118 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 ATRAIDQ6UW56 229 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 ATP11AUNQ6ZP68 121 aa4.11□□□□□ -1.75
USF3-202ENST00000478658 FRMD6-AS1P0C7T7 363 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 WDR90Q96KV7 1748 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 LY6G6DO95868 133 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 C2orf48Q96LS8 159 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 PRLHP81277 87 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 CENPVL1A0A0U1RR11 272 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 PRB1P04280 392 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 SPINK2P20155 84 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 ODF3BA8MYP8 253 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 LINC00208Q96KT6 92 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 PRO0628Q9UI54 55 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 IGKV1-8A0A0C4DH67 115 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 IGLV2-23P01705 113 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 LY6G6CO95867 125 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 Q6ZR03 302 aa4.1□□□□□ -1.75
USF3-202ENST00000478658 Q8IZM0 81 aa4.09□□□□□ -1.75
USF3-202ENST00000478658 C8orf17Q9NRJ1 99 aa4.09□□□□□ -1.75
USF3-202ENST00000478658 F8P00451 2351 aa4.09□□□□□ -1.75
USF3-202ENST00000478658 EGFEM1PQ0D2K5 195 aa4.09□□□□□ -1.75
USF3-202ENST00000478658 TRBV6-8A0A0A6YYG3 113 aa4.09□□□□□ -1.75
USF3-202ENST00000478658 C6orf99Q4VX62 202 aa4.09□□□□□ -1.75
USF3-202ENST00000478658 FOXL2NBQ6ZUU3 175 aa4.09□□□□□ -1.75
USF3-202ENST00000478658 WFDC13Q8IUB5 93 aa4.09□□□□□ -1.75
USF3-202ENST00000478658 C20orf203Q8NBC4 194 aa4.09□□□□□ -1.75
USF3-202ENST00000478658 ZFAND3Q9H8U3 227 aa4.09□□□□□ -1.75
USF3-202ENST00000478658 PRAC2D3DTV9 90 aa4.09□□□□□ -1.76
USF3-202ENST00000478658 C3orf84H3BNL1 204 aa4.09□□□□□ -1.76
USF3-202ENST00000478658 RNASE13Q5GAN3 156 aaKnown RBP4.09□□□□□ -1.76
USF3-202ENST00000478658 ATP1A1-AS1Q5TC04 95 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 LOC100131303A0A0U1RQF7 123 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 LYNX1G3V0Z9 82 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 LYNX1P0DP58 116 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 IGHV6-1A0A0B4J1U7 121 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 A0A0J9YXV3 536 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 C6orf48Q9UBA6 75 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 LOC105371267A0A1B0GV96 52 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 ELOF1P60002 83 aaKnown RBP4.08□□□□□ -1.76
USF3-202ENST00000478658 C1orf137Q5JT78 98 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 MSRB1Q9NZV6 116 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 IGHV4-30-4P0DP06 118 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 IGHV4-31P0DP07 118 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 C10orf55Q5SWW7 151 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 CCDC168Q8NDH2 2452 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 A0A0J9YWU9 116 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 C1orf134Q5TEV5 83 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
USF3-202ENST00000478658 Q9BRP9 147 aa4.07□□□□□ -1.76
USF3-202ENST00000478658 A0A0J9YX75 114 aa4.07□□□□□ -1.76
USF3-202ENST00000478658 FSTL3O95633 263 aa4.07□□□□□ -1.76
USF3-202ENST00000478658 C22orf34Q6ZV56 151 aa4.07□□□□□ -1.76
USF3-202ENST00000478658 TP73-AS1Q9UF72 201 aa4.07□□□□□ -1.76
USF3-202ENST00000478658 GNRH2O43555 120 aa4.07□□□□□ -1.76
USF3-202ENST00000478658 RIF1Q5UIP0 2472 aaKnown RBP4.07□□□□□ -1.76
USF3-202ENST00000478658 G3V318 75 aa4.07□□□□□ -1.76
USF3-202ENST00000478658 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
USF3-202ENST00000478658 PATE2Q6UY27 113 aa4.06□□□□□ -1.76
USF3-202ENST00000478658 IGLV11-55A0A075B6I3 123 aa4.06□□□□□ -1.76
USF3-202ENST00000478658 K7EIM0 57 aa4.06□□□□□ -1.76
USF3-202ENST00000478658 RBM12B-AS1Q9P1G2 102 aa4.06□□□□□ -1.76
USF3-202ENST00000478658 EPM2AB3EWF7 344 aa4.06□□□□□ -1.76
USF3-202ENST00000478658 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
USF3-202ENST00000478658 LINC00308Q8TCZ7 52 aa4.06□□□□□ -1.76
USF3-202ENST00000478658 MAP6D1Q9H9H5 199 aa4.06□□□□□ -1.76
USF3-202ENST00000478658 IGLV1-44P01699 117 aa4.05□□□□□ -1.76
USF3-202ENST00000478658 IGLV4-3A0A075B6K6 122 aa4.05□□□□□ -1.76
USF3-202ENST00000478658 UQCR11O14957 56 aa4.05□□□□□ -1.76
USF3-202ENST00000478658 RNASE3P12724 160 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms