RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 SIRPDQ9H106 197 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 C14orf132Q9NPU4 83 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 LINC00846Q9NV44 126 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 UBE2D4Q9Y2X8 147 aa7.14□□□□□ -1.27
COL13A1-207ENST00000478219 IGHV3-38A0A0C4DH36 116 aa7.13□□□□□ -1.27
COL13A1-207ENST00000478219 NDUFA4O00483 81 aa7.13□□□□□ -1.27
COL13A1-207ENST00000478219 NDUFA1O15239 70 aa7.13□□□□□ -1.27
COL13A1-207ENST00000478219 SPINK13Q1W4C9 94 aa7.13□□□□□ -1.27
COL13A1-207ENST00000478219 PIK3CD-AS1Q5SR53 167 aa7.13□□□□□ -1.27
COL13A1-207ENST00000478219 LINC00467Q9BRT7 94 aa7.13□□□□□ -1.27
COL13A1-207ENST00000478219 TMEM258P61165 79 aa7.13□□□□□ -1.27
COL13A1-207ENST00000478219 C19orf54Q5BKX5 351 aa7.13□□□□□ -1.27
COL13A1-207ENST00000478219 HTN1P15515 57 aa7.12□□□□□ -1.27
COL13A1-207ENST00000478219 SERP2Q8N6R1 65 aa7.12□□□□□ -1.27
COL13A1-207ENST00000478219 MALP21145 153 aa7.12□□□□□ -1.27
COL13A1-207ENST00000478219 FHL2Q14192 279 aa7.12□□□□□ -1.27
COL13A1-207ENST00000478219 C10orf105Q8TEF2 133 aa7.12□□□□□ -1.27
COL13A1-207ENST00000478219 PRIMA1Q86XR5 153 aa7.11□□□□□ -1.27
COL13A1-207ENST00000478219 IGHV1OR15-1A0A075B7D0 117 aa7.11□□□□□ -1.27
COL13A1-207ENST00000478219 A0A087WYN8 130 aa7.11□□□□□ -1.27
COL13A1-207ENST00000478219 FAM223BA6NKX1 122 aa7.1□□□□□ -1.27
COL13A1-207ENST00000478219 USP17L23D6RBM5 183 aa7.1□□□□□ -1.27
COL13A1-207ENST00000478219 RBMY1A1P0DJD3 496 aaKnown RBP7.1□□□□□ -1.27
COL13A1-207ENST00000478219 RBMY1CP0DJD4 496 aa7.1□□□□□ -1.27
COL13A1-207ENST00000478219 HILS1P60008 231 aa7.1□□□□□ -1.27
COL13A1-207ENST00000478219 RBMY1FQ15415 496 aaKnown RBP7.1□□□□□ -1.27
COL13A1-207ENST00000478219 FAM222AQ5U5X8 452 aa7.1□□□□□ -1.27
COL13A1-207ENST00000478219 FAM223AQ8IWN6 122 aa7.1□□□□□ -1.27
COL13A1-207ENST00000478219 INAFM2P0DMQ5 153 aa7.1□□□□□ -1.27
COL13A1-207ENST00000478219 SYNJ2BPP57105 145 aa7.1□□□□□ -1.27
COL13A1-207ENST00000478219 Q8NA96 180 aa7.1□□□□□ -1.27
COL13A1-207ENST00000478219 ABCA2Q9BZC7 2435 aa7.09□□□□□ -1.27
COL13A1-207ENST00000478219 RIF1Q5UIP0 2472 aaKnown RBP7.09□□□□□ -1.27
COL13A1-207ENST00000478219 CIRBPQ14011 172 aaKnown RBP7.09□□□□□ -1.27
COL13A1-207ENST00000478219 WFDC9Q8NEX5 89 aa7.09□□□□□ -1.27
COL13A1-207ENST00000478219 IGHV3OR16-12A0A075B7B8 117 aa7.09□□□□□ -1.28
COL13A1-207ENST00000478219 DNAL4O96015 105 aa7.09□□□□□ -1.28
COL13A1-207ENST00000478219 CDSNQ15517 529 aa7.09□□□□□ -1.28
COL13A1-207ENST00000478219 IGLV5-45A0A087WSX0 123 aa7.08□□□□□ -1.28
COL13A1-207ENST00000478219 IGLV5-39A0A0G2JS06 123 aa7.08□□□□□ -1.28
COL13A1-207ENST00000478219 ZNF561-AS1K7EIQ3 104 aa7.08□□□□□ -1.28
COL13A1-207ENST00000478219 LINC00337Q8N6G1 96 aa7.08□□□□□ -1.28
COL13A1-207ENST00000478219 CEP295Q9C0D2 2601 aa7.08□□□□□ -1.28
COL13A1-207ENST00000478219 NCR3O14931 201 aa7.07□□□□□ -1.28
COL13A1-207ENST00000478219 LINC00242Q5T6M2 205 aa7.07□□□□□ -1.28
COL13A1-207ENST00000478219 ZNF292O60281 2723 aa7.07□□□□□ -1.28
COL13A1-207ENST00000478219 SMIM1B2RUZ4 78 aa7.07□□□□□ -1.28
COL13A1-207ENST00000478219 FBXL19-AS1Q494R0 122 aa7.07□□□□□ -1.28
COL13A1-207ENST00000478219 KHDC1LQ5JSQ8 128 aa7.07□□□□□ -1.28
COL13A1-207ENST00000478219 Q6JHZ5 121 aa7.07□□□□□ -1.28
COL13A1-207ENST00000478219 HIST2H2BCQ6DN03 193 aa7.06□□□□□ -1.28
COL13A1-207ENST00000478219 HIST2H2BDQ6DRA6 164 aa7.06□□□□□ -1.28
COL13A1-207ENST00000478219 IGKV2-28A0A075B6P5 120 aa7.06□□□□□ -1.28
COL13A1-207ENST00000478219 IGKV2D-28P01615 120 aa7.06□□□□□ -1.28
COL13A1-207ENST00000478219 SLPIP03973 132 aa7.06□□□□□ -1.28
COL13A1-207ENST00000478219 RPL28P46779 137 aaKnown RBP7.06□□□□□ -1.28
COL13A1-207ENST00000478219 UCNP55089 124 aa7.06□□□□□ -1.28
COL13A1-207ENST00000478219 SEC61GP60059 68 aa7.06□□□□□ -1.28
COL13A1-207ENST00000478219 LY6EQ16553 131 aa7.06□□□□□ -1.28
COL13A1-207ENST00000478219 BRD3OSQ6XYD6 125 aa7.06□□□□□ -1.28
COL13A1-207ENST00000478219 ATRXP46100 2492 aa7.06□□□□□ -1.28
COL13A1-207ENST00000478219 BLCAPP62952 87 aa7.05□□□□□ -1.28
COL13A1-207ENST00000478219 C11orf71Q6IPW1 123 aa7.05□□□□□ -1.28
COL13A1-207ENST00000478219 MOB4Q9Y3A3 225 aa7.05□□□□□ -1.28
COL13A1-207ENST00000478219 NOTCH3Q9UM47 2321 aa7.04□□□□□ -1.28
COL13A1-207ENST00000478219 SMIM11BQ8TCY0 68 aa7.04□□□□□ -1.28
COL13A1-207ENST00000478219 TRAV23DV6A0A075B6W5 121 aa7.04□□□□□ -1.28
COL13A1-207ENST00000478219 LINC00336Q6ZUF6 198 aa7.04□□□□□ -1.28
COL13A1-207ENST00000478219 Q96MF0 132 aa7.04□□□□□ -1.28
COL13A1-207ENST00000478219 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
COL13A1-207ENST00000478219 CSPG4Q6UVK1 2322 aa7.04□□□□□ -1.28
COL13A1-207ENST00000478219 CELSR2Q9HCU4 2923 aa7.03□□□□□ -1.28
COL13A1-207ENST00000478219 K7ENP7 123 aa7.03□□□□□ -1.28
COL13A1-207ENST00000478219 FAM19A1Q7Z5A9 133 aa7.03□□□□□ -1.28
COL13A1-207ENST00000478219 A0A1W2PPR1 153 aa7.03□□□□□ -1.28
COL13A1-207ENST00000478219 SS18Q15532 418 aa7.03□□□□□ -1.28
COL13A1-207ENST00000478219 LECT2O14960 151 aa7.02□□□□□ -1.29
COL13A1-207ENST00000478219 GHRHP01286 108 aa7.02□□□□□ -1.29
COL13A1-207ENST00000478219 DGAT2L7PQ6IED9 249 aa7.02□□□□□ -1.29
COL13A1-207ENST00000478219 C10orf99Q6UWK7 81 aa7.02□□□□□ -1.29
COL13A1-207ENST00000478219 C20orf197Q8N268 126 aa7.02□□□□□ -1.29
COL13A1-207ENST00000478219 CRPP02741 224 aa7.01□□□□□ -1.29
COL13A1-207ENST00000478219 PFN2P35080 140 aa7.01□□□□□ -1.29
COL13A1-207ENST00000478219 MIR7-3HGQ8N6C7 128 aa7.01□□□□□ -1.29
COL13A1-207ENST00000478219 USMG5Q96IX5 58 aa7.01□□□□□ -1.29
COL13A1-207ENST00000478219 ZFHX2Q9C0A1 2572 aaPredicted RBP7.01□□□□□ -1.29
COL13A1-207ENST00000478219 MUC6Q6W4X9 2439 aa7.01□□□□□ -1.29
COL13A1-207ENST00000478219 AKAP9Q99996 3911 aa7.01□□□□□ -1.29
COL13A1-207ENST00000478219 ZNF415Q09FC8 603 aa7.01□□□□□ -1.29
COL13A1-207ENST00000478219 PRORYQ9H606 182 aa7.01□□□□□ -1.29
COL13A1-207ENST00000478219 K7EQG2 157 aa7□□□□□ -1.29
COL13A1-207ENST00000478219 CFHR3Q02985 330 aa7□□□□□ -1.29
COL13A1-207ENST00000478219 CCL21O00585 134 aa7□□□□□ -1.29
COL13A1-207ENST00000478219 SND1-IT1Q9HBX3 110 aa7□□□□□ -1.29
COL13A1-207ENST00000478219 TRAV13-2A0A0B4J235 113 aa6.99□□□□□ -1.29
COL13A1-207ENST00000478219 LMO4P61968 165 aa6.99□□□□□ -1.29
COL13A1-207ENST00000478219 SNRPD3P62318 126 aaKnown RBP6.99□□□□□ -1.29
COL13A1-207ENST00000478219 ENHOQ6UWT2 76 aa6.99□□□□□ -1.29
COL13A1-207ENST00000478219 TMEM243Q9BU79 118 aa6.99□□□□□ -1.29
COL13A1-207ENST00000478219 BPESC1Q9GZL8 116 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms