RNA–Protein interactions for RNA: ENST00000478209.1

PDZRN3-207, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-207ENST00000478209 MAP1LC3AQ9H492 121 aa10.84□□□□□ -0.67
PDZRN3-207ENST00000478209 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.83□□□□□ -0.68
PDZRN3-207ENST00000478209 RAB5AP20339 215 aa10.83□□□□□ -0.68
PDZRN3-207ENST00000478209 COX19Q49B96 90 aa10.83□□□□□ -0.68
PDZRN3-207ENST00000478209 DYNC1H1Q14204 4646 aaKnown RBP10.83□□□□□ -0.68
PDZRN3-207ENST00000478209 USP17L23D6RBM5 183 aa10.82□□□□□ -0.68
PDZRN3-207ENST00000478209 GCSHP23434 173 aa10.82□□□□□ -0.68
PDZRN3-207ENST00000478209 KRTAP26-1Q6PEX3 210 aa10.82□□□□□ -0.68
PDZRN3-207ENST00000478209 LOC389332A0A1B0GUA5 103 aa10.81□□□□□ -0.68
PDZRN3-207ENST00000478209 PRSS47A8MTI9 375 aa10.81□□□□□ -0.68
PDZRN3-207ENST00000478209 GNB1LQ9BYB4 327 aa10.81□□□□□ -0.68
PDZRN3-207ENST00000478209 UBE2D4Q9Y2X8 147 aa10.81□□□□□ -0.68
PDZRN3-207ENST00000478209 CSDC2Q9Y534 153 aaKnown RBP10.81□□□□□ -0.68
PDZRN3-207ENST00000478209 CDK2AP2O75956 126 aa10.8□□□□□ -0.68
PDZRN3-207ENST00000478209 ZNF664Q8N3J9 261 aa10.8□□□□□ -0.68
PDZRN3-207ENST00000478209 TIMM21Q9BVV7 248 aa10.8□□□□□ -0.68
PDZRN3-207ENST00000478209 CDC42SE2Q9NRR3 84 aa10.8□□□□□ -0.68
PDZRN3-207ENST00000478209 GAGE12HA6NDE8 117 aa10.79□□□□□ -0.68
PDZRN3-207ENST00000478209 MT-ND6P03923 174 aa10.79□□□□□ -0.68
PDZRN3-207ENST00000478209 KIAA1644Q3SXP7 199 aa10.79□□□□□ -0.68
PDZRN3-207ENST00000478209 Q8N8P6 123 aa10.79□□□□□ -0.68
PDZRN3-207ENST00000478209 CHCHD10Q8WYQ3 142 aaPredicted RBP10.79□□□□□ -0.68
PDZRN3-207ENST00000478209 KRTAP10-1P60331 282 aa10.78□□□□□ -0.68
PDZRN3-207ENST00000478209 SS18Q15532 418 aa10.78□□□□□ -0.68
PDZRN3-207ENST00000478209 LINC00959A0A1B0GUT2 108 aa10.77□□□□□ -0.69
PDZRN3-207ENST00000478209 RPL39P62891 51 aaKnown RBP10.77□□□□□ -0.69
PDZRN3-207ENST00000478209 NXT2Q9NPJ8 142 aaKnown RBP10.77□□□□□ -0.69
PDZRN3-207ENST00000478209 SPANXA1Q9NS26 97 aa10.77□□□□□ -0.69
PDZRN3-207ENST00000478209 Q6ZUT4 128 aa10.76□□□□□ -0.69
PDZRN3-207ENST00000478209 TGIF2-C20orf24A0A0A6YYL0 155 aa10.75□□□□□ -0.69
PDZRN3-207ENST00000478209 K7EMI3 77 aa10.75□□□□□ -0.69
PDZRN3-207ENST00000478209 CCL25O15444 150 aa10.75□□□□□ -0.69
PDZRN3-207ENST00000478209 PRSS1P07477 247 aa10.75□□□□□ -0.69
PDZRN3-207ENST00000478209 XCL1P47992 114 aa10.75□□□□□ -0.69
PDZRN3-207ENST00000478209 ORMDL2Q53FV1 153 aa10.75□□□□□ -0.69
PDZRN3-207ENST00000478209 RNASE13Q5GAN3 156 aaKnown RBP10.75□□□□□ -0.69
PDZRN3-207ENST00000478209 CFAP161Q6P656 301 aa10.75□□□□□ -0.69
PDZRN3-207ENST00000478209 MRPL18Q9H0U6 180 aaKnown RBP10.75□□□□□ -0.69
PDZRN3-207ENST00000478209 IFI27P40305 119 aaPredicted RBP10.74□□□□□ -0.69
PDZRN3-207ENST00000478209 FABP9Q0Z7S8 132 aa10.74□□□□□ -0.69
PDZRN3-207ENST00000478209 hDV102S1A0JD36 115 aa10.73□□□□□ -0.69
PDZRN3-207ENST00000478209 MRPS36P82909 103 aaKnown RBP10.73□□□□□ -0.69
PDZRN3-207ENST00000478209 SLC7A5P1Q8MH63 180 aa10.73□□□□□ -0.69
PDZRN3-207ENST00000478209 AP5S1Q9NUS5 200 aa10.73□□□□□ -0.69
PDZRN3-207ENST00000478209 CYSLTR1Q9Y271 337 aa10.73□□□□□ -0.69
PDZRN3-207ENST00000478209 KIAA1109Q2LD37 5005 aa10.73□□□□□ -0.69
PDZRN3-207ENST00000478209 TRAV13-1A0A0B4J241 112 aa10.72□□□□□ -0.69
PDZRN3-207ENST00000478209 C1orf196B1AJZ1 125 aa10.72□□□□□ -0.69
PDZRN3-207ENST00000478209 FOXI1Q12951 378 aa10.72□□□□□ -0.69
PDZRN3-207ENST00000478209 CD164L2Q6UWJ8 174 aa10.72□□□□□ -0.69
PDZRN3-207ENST00000478209 PRSS3P2Q8NHM4 247 aa10.72□□□□□ -0.69
PDZRN3-207ENST00000478209 ALKBH7Q9BT30 221 aaPredicted RBP10.72□□□□□ -0.69
PDZRN3-207ENST00000478209 LRP1BQ9NZR2 4599 aa10.72□□□□□ -0.69
PDZRN3-207ENST00000478209 DNAH5Q8TE73 4624 aa10.71□□□□□ -0.69
PDZRN3-207ENST00000478209 G0S2P27469 103 aa10.71□□□□□ -0.69
PDZRN3-207ENST00000478209 C2orf66Q6UXQ4 117 aa10.71□□□□□ -0.69
PDZRN3-207ENST00000478209 PYGO1Q9Y3Y4 419 aa10.71□□□□□ -0.69
PDZRN3-207ENST00000478209 TRAPPC1Q9Y5R8 145 aa10.71□□□□□ -0.69
PDZRN3-207ENST00000478209 LINC01620Q4KN68 170 aa10.7□□□□□ -0.7
PDZRN3-207ENST00000478209 C15orf56Q8N910 161 aa10.7□□□□□ -0.7
PDZRN3-207ENST00000478209 OPRPNQ99935 248 aaPredicted RBP10.7□□□□□ -0.7
PDZRN3-207ENST00000478209 IFITM10A6NMD0 228 aa10.69□□□□□ -0.7
PDZRN3-207ENST00000478209 IGLV4-3A0A075B6K6 122 aa10.68□□□□□ -0.7
PDZRN3-207ENST00000478209 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.68□□□□□ -0.7
PDZRN3-207ENST00000478209 IGHV1-58A0A0C4DH39 117 aa10.68□□□□□ -0.7
PDZRN3-207ENST00000478209 HIGD2BQ4VC39 106 aa10.68□□□□□ -0.7
PDZRN3-207ENST00000478209 FAM104AQ969W3 186 aa10.68□□□□□ -0.7
PDZRN3-207ENST00000478209 TMEM141Q96I45 108 aa10.68□□□□□ -0.7
PDZRN3-207ENST00000478209 SMCO4Q9NRQ5 59 aa10.68□□□□□ -0.7
PDZRN3-207ENST00000478209 HERC2O95714 4834 aa10.68□□□□□ -0.7
PDZRN3-207ENST00000478209 COX7A2LO14548 114 aa10.67□□□□□ -0.7
PDZRN3-207ENST00000478209 MALP21145 153 aa10.67□□□□□ -0.7
PDZRN3-207ENST00000478209 XGP55808 180 aa10.67□□□□□ -0.7
PDZRN3-207ENST00000478209 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
PDZRN3-207ENST00000478209 Q6ZN92 141 aa10.67□□□□□ -0.7
PDZRN3-207ENST00000478209 FA2HQ7L5A8 372 aa10.67□□□□□ -0.7
PDZRN3-207ENST00000478209 RYR1P21817 5038 aa10.66□□□□□ -0.7
PDZRN3-207ENST00000478209 GVQW2A0A096LPI5 108 aaPredicted RBP10.66□□□□□ -0.7
PDZRN3-207ENST00000478209 TEX43Q6ZNM6 134 aa10.66□□□□□ -0.7
PDZRN3-207ENST00000478209 CBLN2Q8IUK8 224 aa10.66□□□□□ -0.7
PDZRN3-207ENST00000478209 C9orf163Q8N9P6 203 aa10.66□□□□□ -0.7
PDZRN3-207ENST00000478209 YPEL4Q96NS1 127 aa10.66□□□□□ -0.7
PDZRN3-207ENST00000478209 FAM30AQ9NZY2 134 aa10.66□□□□□ -0.7
PDZRN3-207ENST00000478209 NPSP0C0P6 89 aa10.65□□□□□ -0.7
PDZRN3-207ENST00000478209 Q6ZSA8 131 aa10.65□□□□□ -0.7
PDZRN3-207ENST00000478209 C2orf88Q9BSF0 95 aa10.65□□□□□ -0.7
PDZRN3-207ENST00000478209 LINC01549A6NIU2 74 aa10.64□□□□□ -0.71
PDZRN3-207ENST00000478209 PAPPA-AS1Q5QFB9 102 aa10.64□□□□□ -0.71
PDZRN3-207ENST00000478209 TOMM6Q96B49 74 aa10.64□□□□□ -0.71
PDZRN3-207ENST00000478209 LINC01546A6NGU7 62 aa10.63□□□□□ -0.71
PDZRN3-207ENST00000478209 IGIPA6NJ69 53 aa10.63□□□□□ -0.71
PDZRN3-207ENST00000478209 APOMO95445 188 aa10.63□□□□□ -0.71
PDZRN3-207ENST00000478209 HAMPP81172 84 aa10.63□□□□□ -0.71
PDZRN3-207ENST00000478209 C5orf38Q86SI9 138 aa10.63□□□□□ -0.71
PDZRN3-207ENST00000478209 Q8N1X5 172 aa10.63□□□□□ -0.71
PDZRN3-207ENST00000478209 TIMM17AQ99595 171 aa10.63□□□□□ -0.71
PDZRN3-207ENST00000478209 VCX2Q9H322 139 aa10.63□□□□□ -0.71
PDZRN3-207ENST00000478209 IGHV3-64A0A075B6Q5 118 aa10.62□□□□□ -0.71
PDZRN3-207ENST00000478209 ZNF561-AS1K7EIQ3 104 aa10.62□□□□□ -0.71
PDZRN3-207ENST00000478209 SLPIP03973 132 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms