RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 PHF5AQ7RTV0 110 aaKnown RBP4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 PRR26Q8N8Z3 221 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 MBD3L1Q8WWY6 194 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 CAMK2N2Q96S95 79 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 MANBALQ9NQG1 85 aa4.1□□□□□ -1.75
RTFDC1-206ENST00000477485 A0A0U1RQV1 116 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 A0A1W2PNN7 141 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 KANTRA0A1W2PQU2 76 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 C19orf71A6NCJ1 209 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 I3L3M4 83 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 UBE2D1P51668 147 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 C9orf116Q5BN46 136 aaPredicted RBP4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 DIRC1Q969H9 104 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 MRAP2Q96G30 205 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 BIN3Q9NQY0 253 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 MED9Q9NWA0 146 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 TMEM242Q9NWH2 141 aa4.09□□□□□ -1.75
RTFDC1-206ENST00000477485 A0A087WZ39 114 aa4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 TEX46H3BTG2 121 aa4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 COX7A2LO14548 114 aa4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 APOMO95445 188 aa4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 CTRLP40313 264 aa4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 FOXA3P55318 350 aaPredicted RBP4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 CCL20P78556 96 aa4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 RNASE13Q5GAN3 156 aaKnown RBP4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 CD164L2Q6UWJ8 174 aa4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 C11orf52Q96A22 123 aa4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 OPRPNQ99935 248 aaPredicted RBP4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 RNASE7Q9H1E1 156 aaKnown RBP4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 RPP21Q9H633 154 aaKnown RBP4.08□□□□□ -1.76
RTFDC1-206ENST00000477485 G3V3Q6 166 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 BCL2L11O43521 198 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 IGLV7-43P04211 117 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 MEF2BQ02080 365 aaPredicted RBP4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 TEX261Q6UWH6 196 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 C9orf62Q8N4C0 152 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 NUP35Q8NFH5 326 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 NUDT10Q8NFP7 164 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 BORCS7Q96B45 105 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 SMIM12Q96EX1 92 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 NUDT11Q96G61 164 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 KRTAP9-2Q9BYQ4 174 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 ST20Q9HBF5 79 aa4.07□□□□□ -1.76
RTFDC1-206ENST00000477485 TRBV20OR9-2A0A075B6H5 130 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 TRAV13-1A0A0B4J241 112 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 C7orf77A4D0Y5 90 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 H0Y9J4 135 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 PDE6DO43924 150 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 TSHBP01222 138 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 FCER1GP30273 86 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 UBE2BP63146 152 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 SPAG11BQ08648 103 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 ZNF345Q14585 488 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 FAM19A5Q7Z5A7 132 aaPredicted RBP4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 C5orf38Q86SI9 138 aa4.06□□□□□ -1.76
RTFDC1-206ENST00000477485 LPAP08519 4548 aa4.05□□□□□ -1.76
RTFDC1-206ENST00000477485 TRAV1-1A0A0B4J248 108 aa4.05□□□□□ -1.76
RTFDC1-206ENST00000477485 C1orf196B1AJZ1 125 aa4.05□□□□□ -1.76
RTFDC1-206ENST00000477485 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.05□□□□□ -1.76
RTFDC1-206ENST00000477485 TSKUQ8WUA8 353 aa4.05□□□□□ -1.76
RTFDC1-206ENST00000477485 CNFNQ9BYD5 112 aa4.05□□□□□ -1.76
RTFDC1-206ENST00000477485 CDC42SE2Q9NRR3 84 aa4.05□□□□□ -1.76
RTFDC1-206ENST00000477485 IGLV1-50A0A075B6I6 118 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 FAM168BA1KXE4 195 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 GATCO43716 136 aaKnown RBP4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 TSPAN13O95857 204 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 ESDP10768 282 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 CEBPGP53567 150 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 SMAGPQ0VAQ4 97 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 GAGE2EQ4V326 116 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 ORAOV1Q8WV07 137 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 C2orf48Q96LS8 159 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 CDIP1Q9H305 208 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 GAGE2DQ9UEU5 116 aa4.04□□□□□ -1.76
RTFDC1-206ENST00000477485 TRBV6-5A0A0K0K1A5 114 aa4.03□□□□□ -1.76
RTFDC1-206ENST00000477485 SMKR1H3BMG3 65 aa4.03□□□□□ -1.76
RTFDC1-206ENST00000477485 K7EN84 100 aa4.03□□□□□ -1.76
RTFDC1-206ENST00000477485 RPL13AP40429 203 aaKnown RBP4.03□□□□□ -1.76
RTFDC1-206ENST00000477485 Q6ZUT4 128 aa4.03□□□□□ -1.76
RTFDC1-206ENST00000477485 MRPL52Q86TS9 123 aaKnown RBP4.03□□□□□ -1.76
RTFDC1-206ENST00000477485 OCC1Q8TAD7 63 aa4.03□□□□□ -1.76
RTFDC1-206ENST00000477485 IMMP2LQ96T52 175 aa4.03□□□□□ -1.76
RTFDC1-206ENST00000477485 HMSDA8MTL9 139 aa4.02□□□□□ -1.77
RTFDC1-206ENST00000477485 A8MWL6 223 aa4.02□□□□□ -1.77
RTFDC1-206ENST00000477485 M0QXV9 152 aa4.02□□□□□ -1.77
RTFDC1-206ENST00000477485 NDUFA1O15239 70 aa4.02□□□□□ -1.77
RTFDC1-206ENST00000477485 RGS21Q2M5E4 152 aa4.02□□□□□ -1.77
RTFDC1-206ENST00000477485 KRTAP11-1Q8IUC1 163 aa4.02□□□□□ -1.77
RTFDC1-206ENST00000477485 KIR2DL4Q99706 377 aa4.02□□□□□ -1.77
RTFDC1-206ENST00000477485 UBE2D4Q9Y2X8 147 aa4.02□□□□□ -1.77
RTFDC1-206ENST00000477485 hCG_2014768A0A024R1R8 64 aa4.01□□□□□ -1.77
RTFDC1-206ENST00000477485 TRBV27A0A0K0K1C4 114 aa4.01□□□□□ -1.77
RTFDC1-206ENST00000477485 VCYO14598 125 aa4.01□□□□□ -1.77
RTFDC1-206ENST00000477485 AMN1Q8IY45 258 aa4.01□□□□□ -1.77
RTFDC1-206ENST00000477485 OR10D4PQ8NGN7 298 aa4.01□□□□□ -1.77
RTFDC1-206ENST00000477485 TMEM18Q96B42 140 aa4.01□□□□□ -1.77
RTFDC1-206ENST00000477485 MRPL35Q9NZE8 188 aaKnown RBP4.01□□□□□ -1.77
RTFDC1-206ENST00000477485 A0A1B0GUT8 65 aa4□□□□□ -1.77
RTFDC1-206ENST00000477485 HIGD1CA8MV81 97 aa4□□□□□ -1.77
RTFDC1-206ENST00000477485 KRTAP1-4P0C5Y4 121 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms