RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 LRP1Q07954 4544 aaKnown RBP2.69□□□□□ -1.98
PDZRN3-206ENST00000477434 FAT3Q8TDW7 4589 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 TRGV1A0A0A0MS02 117 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 TEX48A0A1B0GUV7 120 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 COLCA2A8K830 154 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 RS1O15537 224 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 S100A8P05109 93 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 CRYGDP07320 174 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 TRGC1P0CF51 173 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 HBBP68871 147 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 COX19Q49B96 90 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 FAM222AQ5U5X8 452 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 CFAP126Q5VTH2 177 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 FAM104BQ5XKR9 115 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 UFSP1Q6NVU6 142 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 MRPL54Q6P161 138 aaKnown RBP2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 ZFP2Q6ZN57 461 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 SMIM15Q7Z3B0 74 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 C14orf178Q8N769 122 aaPredicted RBP2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 FAM210BQ96KR6 192 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 AP1S3Q96PC3 154 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 SAMD10Q9BYL1 202 aa2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 MRPL16Q9NX20 251 aaKnown RBP2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 KLK5Q9Y337 293 aaPredicted RBP2.68□□□□□ -1.98
PDZRN3-206ENST00000477434 MUC2Q02817 5179 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 TRGV2A0A075B6R0 118 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 TRAV4A0A0B4J268 109 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 M0R2N4 97 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 HLA-DQA1P01909 254 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 MT-ND6P03923 174 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 SMIM17P0DL12 118 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 DEFB130BP0DP73 79 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 DEFB130AP0DP74 79 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 RAB4AP20338 218 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 RAB5AP20339 215 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 DAD1P61803 113 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 C12orf74Q32Q52 190 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 TMEM136Q6ZRR5 245 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 OR4C5Q8NGB2 326 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 FRZBQ92765 325 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 RNF185Q96GF1 192 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 DPH3P1Q9H4G8 78 aa2.67□□□□□ -1.98
PDZRN3-206ENST00000477434 IGLV2-18A0A075B6J9 118 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 TRBV6-4A0A1B0GX49 114 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 FAM168BA1KXE4 195 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 IGLL5B9A064 214 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 M0QY20 66 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 IGHV3-53P01767 116 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 PPBPP02775 128 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 ATP5G1P05496 136 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 FUSP35637 526 aaKnown RBP eCLIP2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 RAB4BP61018 213 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 SLAQ13239 276 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 MRPL51Q4U2R6 128 aaKnown RBP2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 FAM74A4Q5TZK3 123 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 AMN1Q8IY45 258 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 HHLA3Q9XRX5 114 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 TRAPPC1Q9Y5R8 145 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 SRRM2Q9UQ35 2752 aaKnown RBP2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 PKHD1L1Q86WI1 4243 aa2.66□□□□□ -1.98
PDZRN3-206ENST00000477434 IGHV3-73A0A0B4J1V6 119 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 TRAV26-2A0A0B4J265 109 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 TRGV4A0A0C4DH28 118 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 TRBV10-1A0A0K0K1A3 114 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 D6R8Y8 96 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 H3BNG1 76 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 H7C1H1 209 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 APCSP02743 223 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 TRGC2P03986 189 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 CKS2P33552 79 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 RPS10P46783 165 aaKnown RBP2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 CRYBA4P53673 196 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 FABP9Q0Z7S8 132 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 RHOHQ15669 191 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 ZNF56Q15929 161 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 LCE3AQ5TA76 89 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 ORMDL3Q8N138 153 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 SLC25A29Q8N8R3 303 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 MRAP2Q96G30 205 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 NIT2Q9NQR4 276 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 Q9UF83 564 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 PRO0255Q9UI72 69 aa2.65□□□□□ -1.99
PDZRN3-206ENST00000477434 TRAV26-1A0A087WT03 109 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 DEFB131BA0A096LNP1 70 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 TRAV10A0A0B4J240 114 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 TRBV6-5A0A0K0K1A5 114 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 F5H768 121 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 SMKR1H3BMG3 65 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 PPP1R17O96001 155 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 MGPP08493 103 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 P0DMU3 169 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 FAM231AP0DMU4 169 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 FAM231CP0DMU5 169 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 POLR2KP53803 58 aaKnown RBP2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 RPL32P62910 135 aaKnown RBP2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 VSIG2Q96IQ7 327 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 DNAJC30Q96LL9 226 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 PRELID3AQ96N28 172 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 C20orf78Q9BR46 151 aa2.64□□□□□ -1.99
PDZRN3-206ENST00000477434 PRADC1Q9BSG0 188 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms