RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 CACNG7P62955 275 aa5.84□□□□□ -1.47
COL4A5-204ENST00000477429 MEF2BQ02080 365 aaPredicted RBP5.84□□□□□ -1.47
COL4A5-204ENST00000477429 KRTAP7-1Q8IUC3 87 aa5.84□□□□□ -1.47
COL4A5-204ENST00000477429 NUP35Q8NFH5 326 aa5.84□□□□□ -1.47
COL4A5-204ENST00000477429 OR2D3Q8NGH3 330 aa5.84□□□□□ -1.47
COL4A5-204ENST00000477429 MUC17Q685J3 4493 aa5.84□□□□□ -1.47
COL4A5-204ENST00000477429 RAB19A4D1S5 217 aa5.83□□□□□ -1.48
COL4A5-204ENST00000477429 H0Y9J4 135 aa5.83□□□□□ -1.48
COL4A5-204ENST00000477429 CCL20P78556 96 aa5.83□□□□□ -1.48
COL4A5-204ENST00000477429 AMMECR1LQ6DCA0 310 aa5.83□□□□□ -1.48
COL4A5-204ENST00000477429 OR5A1Q8NGJ0 315 aa5.83□□□□□ -1.48
COL4A5-204ENST00000477429 SFT2D1Q8WV19 159 aa5.83□□□□□ -1.48
COL4A5-204ENST00000477429 MBD3L1Q8WWY6 194 aa5.83□□□□□ -1.48
COL4A5-204ENST00000477429 OPRPNQ99935 248 aaPredicted RBP5.83□□□□□ -1.48
COL4A5-204ENST00000477429 TRBV20OR9-2A0A075B6H5 130 aa5.82□□□□□ -1.48
COL4A5-204ENST00000477429 LOC107984640A0A0U1RRK4 108 aa5.82□□□□□ -1.48
COL4A5-204ENST00000477429 S100A9P06702 114 aaKnown RBP5.82□□□□□ -1.48
COL4A5-204ENST00000477429 CAMPP49913 170 aa5.82□□□□□ -1.48
COL4A5-204ENST00000477429 CENPWQ5EE01 88 aa5.82□□□□□ -1.48
COL4A5-204ENST00000477429 FAM213BQ8TBF2 198 aa5.82□□□□□ -1.48
COL4A5-204ENST00000477429 MED28Q9H204 178 aa5.82□□□□□ -1.48
COL4A5-204ENST00000477429 NDUFA13Q9P0J0 144 aa5.82□□□□□ -1.48
COL4A5-204ENST00000477429 GIPP09681 153 aaPredicted RBP5.81□□□□□ -1.48
COL4A5-204ENST00000477429 SMLR1H3BR10 107 aa5.8□□□□□ -1.48
COL4A5-204ENST00000477429 TSHBP01222 138 aa5.8□□□□□ -1.48
COL4A5-204ENST00000477429 APCSP02743 223 aa5.8□□□□□ -1.48
COL4A5-204ENST00000477429 ESDP10768 282 aa5.8□□□□□ -1.48
COL4A5-204ENST00000477429 CTRLP40313 264 aa5.8□□□□□ -1.48
COL4A5-204ENST00000477429 KCNRGQ8N5I3 272 aa5.8□□□□□ -1.48
COL4A5-204ENST00000477429 DIRC1Q969H9 104 aa5.8□□□□□ -1.48
COL4A5-204ENST00000477429 C11orf52Q96A22 123 aa5.8□□□□□ -1.48
COL4A5-204ENST00000477429 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
COL4A5-204ENST00000477429 SDHAF1A6NFY7 115 aa5.79□□□□□ -1.48
COL4A5-204ENST00000477429 APOMO95445 188 aa5.79□□□□□ -1.48
COL4A5-204ENST00000477429 TSPAN13O95857 204 aa5.79□□□□□ -1.48
COL4A5-204ENST00000477429 TRGC1P0CF51 173 aa5.79□□□□□ -1.48
COL4A5-204ENST00000477429 RPL18AQ02543 176 aaKnown RBP5.79□□□□□ -1.48
COL4A5-204ENST00000477429 RNASE13Q5GAN3 156 aaKnown RBP5.79□□□□□ -1.48
COL4A5-204ENST00000477429 CD164L2Q6UWJ8 174 aa5.79□□□□□ -1.48
COL4A5-204ENST00000477429 C9orf62Q8N4C0 152 aa5.79□□□□□ -1.48
COL4A5-204ENST00000477429 RNASE7Q9H1E1 156 aaKnown RBP5.79□□□□□ -1.48
COL4A5-204ENST00000477429 CDC42SE2Q9NRR3 84 aa5.79□□□□□ -1.48
COL4A5-204ENST00000477429 IGLV1-50A0A075B6I6 118 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 A0A087WZ39 114 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 H7C423 109 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 ARPC5O15511 151 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 BCL2L11O43521 198 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 PFDN1O60925 122 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 NCR2O95944 276 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 IFNA1P01562 189 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 RPS20P60866 119 aaKnown RBP5.78□□□□□ -1.48
COL4A5-204ENST00000477429 TWIST1Q15672 202 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 C10orf25Q5T742 122 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 CNFNQ9BYD5 112 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 TMEM242Q9NWH2 141 aa5.78□□□□□ -1.48
COL4A5-204ENST00000477429 F2Z2F3 143 aa5.77□□□□□ -1.49
COL4A5-204ENST00000477429 ZNF25P17030 456 aaPredicted RBP5.77□□□□□ -1.49
COL4A5-204ENST00000477429 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
COL4A5-204ENST00000477429 C5orf38Q86SI9 138 aa5.77□□□□□ -1.49
COL4A5-204ENST00000477429 CAMK2N2Q96S95 79 aa5.77□□□□□ -1.49
COL4A5-204ENST00000477429 K7EN84 100 aa5.76□□□□□ -1.49
COL4A5-204ENST00000477429 SS18Q15532 418 aa5.76□□□□□ -1.49
COL4A5-204ENST00000477429 FAM19A5Q7Z5A7 132 aaPredicted RBP5.76□□□□□ -1.49
COL4A5-204ENST00000477429 MRPL52Q86TS9 123 aaKnown RBP5.76□□□□□ -1.49
COL4A5-204ENST00000477429 FAM104AQ969W3 186 aa5.76□□□□□ -1.49
COL4A5-204ENST00000477429 GNG13Q9P2W3 67 aa5.76□□□□□ -1.49
COL4A5-204ENST00000477429 I3L3M4 83 aa5.75□□□□□ -1.49
COL4A5-204ENST00000477429 PMCHP20382 165 aa5.75□□□□□ -1.49
COL4A5-204ENST00000477429 EIF5AP63241 154 aaKnown RBP5.75□□□□□ -1.49
COL4A5-204ENST00000477429 PKIGQ9Y2B9 76 aa5.75□□□□□ -1.49
COL4A5-204ENST00000477429 A0A087X002 238 aa5.74□□□□□ -1.49
COL4A5-204ENST00000477429 TRBV6-5A0A0K0K1A5 114 aa5.74□□□□□ -1.49
COL4A5-204ENST00000477429 COX7A2LO14548 114 aa5.74□□□□□ -1.49
COL4A5-204ENST00000477429 PRYO14603 147 aa5.74□□□□□ -1.49
COL4A5-204ENST00000477429 GNG4P50150 75 aa5.74□□□□□ -1.49
COL4A5-204ENST00000477429 TMEM101Q96IK0 257 aa5.74□□□□□ -1.49
COL4A5-204ENST00000477429 BTF3L4Q96K17 158 aa5.74□□□□□ -1.49
COL4A5-204ENST00000477429 C2orf48Q96LS8 159 aa5.74□□□□□ -1.49
COL4A5-204ENST00000477429 TRAV13-1A0A0B4J241 112 aa5.73□□□□□ -1.49
COL4A5-204ENST00000477429 POLR2KP53803 58 aaKnown RBP5.73□□□□□ -1.49
COL4A5-204ENST00000477429 SPAG11BQ08648 103 aa5.73□□□□□ -1.49
COL4A5-204ENST00000477429 UNQ6190/PRO20217Q6UXQ8 127 aa5.73□□□□□ -1.49
COL4A5-204ENST00000477429 Q6ZUT4 128 aa5.73□□□□□ -1.49
COL4A5-204ENST00000477429 ISOC2Q96AB3 205 aa5.73□□□□□ -1.49
COL4A5-204ENST00000477429 RETNLBQ9BQ08 111 aa5.73□□□□□ -1.49
COL4A5-204ENST00000477429 C6orf48Q9UBA6 75 aa5.73□□□□□ -1.49
COL4A5-204ENST00000477429 SMKR1H3BMG3 65 aa5.72□□□□□ -1.49
COL4A5-204ENST00000477429 UBE2D1P51668 147 aa5.72□□□□□ -1.49
COL4A5-204ENST00000477429 EIF5AL1Q6IS14 154 aaKnown RBP5.72□□□□□ -1.49
COL4A5-204ENST00000477429 MRAP2Q96G30 205 aa5.72□□□□□ -1.49
COL4A5-204ENST00000477429 RPP21Q9H633 154 aaKnown RBP5.72□□□□□ -1.49
COL4A5-204ENST00000477429 UBE2D4Q9Y2X8 147 aa5.72□□□□□ -1.49
COL4A5-204ENST00000477429 XKRY2A2RUG3 117 aa5.71□□□□□ -1.5
COL4A5-204ENST00000477429 UMAD1C9J7I0 102 aa5.71□□□□□ -1.5
COL4A5-204ENST00000477429 GAGE2EQ4V326 116 aa5.71□□□□□ -1.5
COL4A5-204ENST00000477429 OCC1Q8TAD7 63 aa5.71□□□□□ -1.5
COL4A5-204ENST00000477429 ANAPC11Q9NYG5 84 aa5.71□□□□□ -1.5
COL4A5-204ENST00000477429 GAGE2DQ9UEU5 116 aa5.71□□□□□ -1.5
COL4A5-204ENST00000477429 TRAV1-1A0A0B4J248 108 aa5.7□□□□□ -1.5
COL4A5-204ENST00000477429 TRBV27A0A0K0K1C4 114 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms