RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLSTN1-205ENST00000477264 LINC00694P0DN24 101 aa11.17□□□□□ -0.62
CLSTN1-205ENST00000477264 COX7CP15954 63 aa11.17□□□□□ -0.62
CLSTN1-205ENST00000477264 J3QLI3 93 aa11.17□□□□□ -0.62
CLSTN1-205ENST00000477264 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
CLSTN1-205ENST00000477264 HERVK_113P63121 156 aa11.17□□□□□ -0.62
CLSTN1-205ENST00000477264 FAM104AQ969W3 186 aa11.17□□□□□ -0.62
CLSTN1-205ENST00000477264 LINC00527Q9UJ94 153 aa11.17□□□□□ -0.62
CLSTN1-205ENST00000477264 ATOX1O00244 68 aa11.16□□□□□ -0.62
CLSTN1-205ENST00000477264 SMCR5Q8TEV8 140 aa11.16□□□□□ -0.62
CLSTN1-205ENST00000477264 CRYGAP11844 174 aa11.16□□□□□ -0.62
CLSTN1-205ENST00000477264 RPS28P62857 69 aaKnown RBP11.16□□□□□ -0.62
CLSTN1-205ENST00000477264 Q6ZSV7 163 aa11.16□□□□□ -0.62
CLSTN1-205ENST00000477264 CR1P17927 2039 aa11.15□□□□□ -0.62
CLSTN1-205ENST00000477264 IGHV4-31P0DP07 118 aa11.15□□□□□ -0.62
CLSTN1-205ENST00000477264 CEMP1Q6PRD7 247 aaPredicted RBP11.15□□□□□ -0.62
CLSTN1-205ENST00000477264 CITED2Q99967 270 aaPredicted RBP11.15□□□□□ -0.62
CLSTN1-205ENST00000477264 IGKV3-7A0A075B6H7 116 aa11.14□□□□□ -0.63
CLSTN1-205ENST00000477264 IGLV5-45A0A087WSX0 123 aa11.14□□□□□ -0.63
CLSTN1-205ENST00000477264 TIRAPP58753 221 aa11.14□□□□□ -0.63
CLSTN1-205ENST00000477264 NPC2P61916 151 aa11.14□□□□□ -0.63
CLSTN1-205ENST00000477264 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
CLSTN1-205ENST00000477264 C3orf56Q8N813 242 aa11.14□□□□□ -0.63
CLSTN1-205ENST00000477264 HIST1H4AP62805 103 aaKnown RBP11.14□□□□□ -0.63
CLSTN1-205ENST00000477264 TMEM219Q86XT9 240 aa11.14□□□□□ -0.63
CLSTN1-205ENST00000477264 RNF152Q8N8N0 203 aa11.14□□□□□ -0.63
CLSTN1-205ENST00000477264 AVPP01185 164 aa11.13□□□□□ -0.63
CLSTN1-205ENST00000477264 LINC00308Q8TCZ7 52 aa11.13□□□□□ -0.63
CLSTN1-205ENST00000477264 ZNF415Q09FC8 603 aa11.13□□□□□ -0.63
CLSTN1-205ENST00000477264 DAZ2Q13117 558 aaKnown RBP11.13□□□□□ -0.63
CLSTN1-205ENST00000477264 DAZ4Q86SG3 579 aaKnown RBP11.13□□□□□ -0.63
CLSTN1-205ENST00000477264 DAZ3Q9NR90 486 aaKnown RBP11.13□□□□□ -0.63
CLSTN1-205ENST00000477264 UBE2D4Q9Y2X8 147 aa11.13□□□□□ -0.63
CLSTN1-205ENST00000477264 WFDC11Q8NEX6 87 aa11.12□□□□□ -0.63
CLSTN1-205ENST00000477264 DUX5Q96PT3 197 aa11.12□□□□□ -0.63
CLSTN1-205ENST00000477264 PIK3CD-AS1Q5SR53 167 aa11.11□□□□□ -0.63
CLSTN1-205ENST00000477264 CSMD1Q96PZ7 3565 aa11.11□□□□□ -0.63
CLSTN1-205ENST00000477264 PF4V1P10720 104 aa11.11□□□□□ -0.63
CLSTN1-205ENST00000477264 SNRPD3P62318 126 aaKnown RBP11.11□□□□□ -0.63
CLSTN1-205ENST00000477264 BEAN1Q3B7T3 259 aa11.11□□□□□ -0.63
CLSTN1-205ENST00000477264 OVOL2Q9BRP0 275 aa11.11□□□□□ -0.63
CLSTN1-205ENST00000477264 CELSR1Q9NYQ6 3014 aa11.1□□□□□ -0.63
CLSTN1-205ENST00000477264 IGHG2P01859 326 aa11.1□□□□□ -0.63
CLSTN1-205ENST00000477264 GAGE2AQ6NT46 116 aa11.1□□□□□ -0.63
CLSTN1-205ENST00000477264 OR13C6PQ8NH95 151 aa11.1□□□□□ -0.63
CLSTN1-205ENST00000477264 SMIM9A6NGZ8 99 aa11.1□□□□□ -0.63
CLSTN1-205ENST00000477264 IGHV3-11P01762 117 aa11.1□□□□□ -0.63
CLSTN1-205ENST00000477264 BAALC-AS2P0C853 105 aa11.1□□□□□ -0.63
CLSTN1-205ENST00000477264 CHCHD7Q9BUK0 85 aa11.1□□□□□ -0.63
CLSTN1-205ENST00000477264 C2orf48Q96LS8 159 aa11.09□□□□□ -0.63
CLSTN1-205ENST00000477264 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
CLSTN1-205ENST00000477264 UNC79Q9P2D8 2635 aa11.08□□□□□ -0.63
CLSTN1-205ENST00000477264 CREBBPQ92793 2442 aa11.08□□□□□ -0.64
CLSTN1-205ENST00000477264 H3BUX3 64 aa11.08□□□□□ -0.64
CLSTN1-205ENST00000477264 FASNP49327 2511 aaKnown RBP11.08□□□□□ -0.64
CLSTN1-205ENST00000477264 TRAV12-2A0A075B6T6 113 aa11.07□□□□□ -0.64
CLSTN1-205ENST00000477264 A8MZ25 164 aa11.07□□□□□ -0.64
CLSTN1-205ENST00000477264 PF4P02776 101 aa11.07□□□□□ -0.64
CLSTN1-205ENST00000477264 PDZD2O15018 2839 aa11.07□□□□□ -0.64
CLSTN1-205ENST00000477264 TMEM258P61165 79 aa11.07□□□□□ -0.64
CLSTN1-205ENST00000477264 IGLV1-40P01703 118 aa11.06□□□□□ -0.64
CLSTN1-205ENST00000477264 ITPR2Q14571 2701 aa11.06□□□□□ -0.64
CLSTN1-205ENST00000477264 LY6EQ16553 131 aa11.06□□□□□ -0.64
CLSTN1-205ENST00000477264 RNASE13Q5GAN3 156 aaKnown RBP11.06□□□□□ -0.64
CLSTN1-205ENST00000477264 CDKN2A-AS1Q9UH64 79 aa11.06□□□□□ -0.64
CLSTN1-205ENST00000477264 ZANQ9Y493 2812 aa11.06□□□□□ -0.64
CLSTN1-205ENST00000477264 K7EQG2 157 aa11.06□□□□□ -0.64
CLSTN1-205ENST00000477264 FAM19A5Q7Z5A7 132 aaPredicted RBP11.06□□□□□ -0.64
CLSTN1-205ENST00000477264 FAM19A3Q7Z5A8 133 aa11.06□□□□□ -0.64
CLSTN1-205ENST00000477264 CCDC168Q8NDH2 2452 aa11.05□□□□□ -0.64
CLSTN1-205ENST00000477264 ITPR3Q14573 2671 aa11.05□□□□□ -0.64
CLSTN1-205ENST00000477264 RPL18AQ02543 176 aaKnown RBP11.05□□□□□ -0.64
CLSTN1-205ENST00000477264 SPINK13Q1W4C9 94 aa11.05□□□□□ -0.64
CLSTN1-205ENST00000477264 Q9H8V8 135 aa11.05□□□□□ -0.64
CLSTN1-205ENST00000477264 ZFHX3Q15911 3703 aa11.05□□□□□ -0.64
CLSTN1-205ENST00000477264 CSPG4Q6UVK1 2322 aa11.05□□□□□ -0.64
CLSTN1-205ENST00000477264 DEFB112Q30KQ8 113 aa11.04□□□□□ -0.64
CLSTN1-205ENST00000477264 Q6JHZ5 121 aa11.04□□□□□ -0.64
CLSTN1-205ENST00000477264 HECTD1Q9ULT8 2610 aa11.04□□□□□ -0.64
CLSTN1-205ENST00000477264 WIPF1O43516 503 aa11.04□□□□□ -0.64
CLSTN1-205ENST00000477264 LOC107984640A0A0U1RRK4 108 aa11.03□□□□□ -0.64
CLSTN1-205ENST00000477264 A6NDX4 124 aa11.03□□□□□ -0.64
CLSTN1-205ENST00000477264 FSHBP01225 129 aa11.03□□□□□ -0.64
CLSTN1-205ENST00000477264 MALP21145 153 aa11.03□□□□□ -0.64
CLSTN1-205ENST00000477264 LINC00467Q9BRT7 94 aa11.03□□□□□ -0.64
CLSTN1-205ENST00000477264 C22orf24Q9Y442 160 aa11.03□□□□□ -0.64
CLSTN1-205ENST00000477264 TEX15Q9BXT5 2789 aa11.03□□□□□ -0.64
CLSTN1-205ENST00000477264 TRAV13-2A0A0B4J235 113 aa11.03□□□□□ -0.64
CLSTN1-205ENST00000477264 PRIMA1Q86XR5 153 aa11.03□□□□□ -0.64
CLSTN1-205ENST00000477264 NACAE9PAV3 2078 aa11.02□□□□□ -0.64
CLSTN1-205ENST00000477264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.02□□□□□ -0.65
CLSTN1-205ENST00000477264 IGKV2-29A2NJV5 120 aaPredicted RBP11.02□□□□□ -0.65
CLSTN1-205ENST00000477264 DNAL4O96015 105 aa11.02□□□□□ -0.65
CLSTN1-205ENST00000477264 RPL28P46779 137 aaKnown RBP11.02□□□□□ -0.65
CLSTN1-205ENST00000477264 IGKV3-20P01619 116 aa11.01□□□□□ -0.65
CLSTN1-205ENST00000477264 KLK5Q9Y337 293 aaPredicted RBP11.01□□□□□ -0.65
CLSTN1-205ENST00000477264 CFHR3Q02985 330 aa11.01□□□□□ -0.65
CLSTN1-205ENST00000477264 HIST2H2BDQ6DRA6 164 aa11.01□□□□□ -0.65
CLSTN1-205ENST00000477264 SOSTDC1Q6X4U4 206 aa11.01□□□□□ -0.65
CLSTN1-205ENST00000477264 SERP2Q8N6R1 65 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms